FFCP PHASE1:Hg19::chr2:238245089..238245122,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C332|description=CAGE_peak_at_chr2:238245089..238245122,-|id=chr2:238245089..238245122,-|ontology_enrichment_celltype=CL:0000055!5.42e-39!180;CL:0000057!5.60e-37!75;CL:0000048!4.29e-17!430;CL:0000723!3.78e-16!436;CL:0000034!1.21e-15!444;CL:0002620!3.56e-15!23;CL:0002320!7.78e-12!365;CL:0000183!1.91e-10!59;CL:0000680!3.44e-10!57;CL:0000056!3.44e-10!57;CL:0000355!3.44e-10!57;CL:0000187!8.02e-10!54;CL:0000134!1.38e-09!358;CL:0002371!3.13e-09!591;CL:0002570!2.73e-08!8;CL:0000219!6.84e-08!390;CL:0000393!8.58e-08!60;CL:0000211!8.58e-08!60;CL:0002334!3.06e-07!12;CL:0000499!3.32e-07!27;CL:0000188!4.04e-07!9;CL:0000144!8.02e-07!625|ontology_enrichment_celltype_v019=CL:0002620;6.02e-14;23!CL:0000057;4.50e-11;73!CL:0002570;1.32e-10;8!CL:0000723;5.37e-09;61!CL:0002320;1.01e-08;188!CL:0002334;3.06e-08;12!CL:0000034;9.59e-08;69!CL:0000188;1.73e-07;9!CL:0000048;2.10e-07;58!CL:0000134;2.10e-07;55!CL:0000138;4.03e-07;6|ontology_enrichment_celltype_v019_2=CL:0000057,1.12e-28,76;CL:0000048,2.94e-17,427;CL:0000723,1.21e-16,433;CL:0000034,7.50e-16,441;CL:0002320,1.10e-15,361;CL:0002620,6.79e-14,23;CL:0000134,3.36e-13,354;CL:0002570,9.74e-11,8;CL:0000219,1.06e-10,386;CL:0002334,1.79e-08,12;CL:0000188,1.85e-07,9;CL:0000058,6.03e-07,6;CL:0000138,6.03e-07,6|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:17;1.23e-09;5!DOID:450;1.23e-09;5!DOID:66;1.23e-09;5!DOID:423;1.23e-09;5!DOID:0080000;1.23e-09;5!DOID:11722;1.23e-09;5|ontology_enrichment_disease_v019_2=DOID:17,1.23e-09,5;DOID:450,1.23e-09,5;DOID:66,1.23e-09,5;DOID:423,1.23e-09,5;DOID:0080000,1.23e-09,5;DOID:11722,1.23e-09,5|ontology_enrichment_uberon=UBERON:0000914!2.39e-14!83;UBERON:0002329!2.39e-14!83;UBERON:0003077!2.39e-14!83;UBERON:0003059!2.39e-14!83;UBERON:0007282!2.39e-14!83;UBERON:0009618!2.39e-14!83;UBERON:0007285!2.39e-14!83;UBERON:0002384!5.22e-12!375;UBERON:0004290!5.79e-12!70;UBERON:0003102!1.86e-11!95;UBERON:0002199!7.98e-11!45;UBERON:0002416!7.98e-11!45;UBERON:0001134!1.04e-10!61;UBERON:0002036!1.04e-10!61;UBERON:0003082!1.04e-10!61;UBERON:0002385!1.43e-10!63;UBERON:0001015!1.43e-10!63;UBERON:0000383!1.43e-10!63;UBERON:0005256!2.22e-10!143;UBERON:0000486!2.13e-09!82;UBERON:0002097!3.04e-09!40;UBERON:0002100!3.07e-07!216|ontology_enrichment_uberon_v019=UBERON:0002384;1.01e-10;198!UBERON:0002097;1.32e-09;41!UBERON:0002199;2.76e-09;46!UBERON:0002416;2.76e-09;46!UBERON:0003102;4.51e-08;50!UBERON:0001013;4.46e-07;14|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.17e-15,371;UBERON:0003102,1.81e-13,99;UBERON:0002199,1.96e-13,46;UBERON:0002416,1.96e-13,46;UBERON:0002097,1.10e-11,41;UBERON:0001013,3.63e-07,14|phase1_expression=1.99846217197612,4.71021152560163,0.845726424575827,0,1.34088328328186,0,0,2.52687949370732,0.783556884599516,0.245733936501509,0,0.218441372130172,0,1.48519623552056,0.994192127183747,0.672325146451775,0.602694528023977,2.92124036154949,0,0.246242116153576,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,2.53007406669196,2.00535164254356,1.01392563272577,5.5670016293577,2.91980922181582,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,1.13967460498122,1.45650098894541,5.44989579422746,0.709336764396714,1.12135520028461,1.06748995729705,0.98667019366864,0.933633106199299,0.269421344139376,0.326923806226917,1.96764655938411,0.576175924479999,0.937285727335186,0.624320153660641,0,1.34503812496621,0.23486899728753,0.647491777472526,0.842704840213491,3.0623125688234,0.982674538494144,1.65321249881225,2.37600571456411,4.20353779773547,0.910161361938026,0.718618141816238,1.17835279767846,1.25118519871964,0.277064115484183,0.877955241761676,1.22595118319608,0.751190294532984,0.567160915800105,9.86642996288741,4.69826255400848,2.7551147150743,6.60200411385685,2.16410311400722,5.15281080091258,3.16398655763703,10.2953562667172,1.75386609290158,8.07788077581166,2.20919756741518,0.80823028409406,5.68015348026583,1.71278566986988,1.01736355386293,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,5.78916844373597,0,1.39310378409594,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0,0,0,0,0,2.6064664424826,1.03993478527958,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0.87192013766656,0.22001485746285,0.387815147273333,3.57656445851882,1.690605505112,2.39344304926383,0,0.514414748524284,1.41849132023278,0.532844358032199,2.28764789853036,4.88359444852299,0.823240336780769,0.977208552881205,2.13235169245527,0,0,0,0.099972991182057,0,0,0,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C332 | |||
|description=CAGE_peak_at_chr2:238245089..238245122,- | |||
|id=chr2:238245089..238245122,- | |||
|ontology_enrichment_celltype=CL:0000055!5.42e-39!180;CL:0000057!5.60e-37!75;CL:0000048!4.29e-17!430;CL:0000723!3.78e-16!436;CL:0000034!1.21e-15!444;CL:0002620!3.56e-15!23;CL:0002320!7.78e-12!365;CL:0000183!1.91e-10!59;CL:0000680!3.44e-10!57;CL:0000056!3.44e-10!57;CL:0000355!3.44e-10!57;CL:0000187!8.02e-10!54;CL:0000134!1.38e-09!358;CL:0002371!3.13e-09!591;CL:0002570!2.73e-08!8;CL:0000219!6.84e-08!390;CL:0000393!8.58e-08!60;CL:0000211!8.58e-08!60;CL:0002334!3.06e-07!12;CL:0000499!3.32e-07!27;CL:0000188!4.04e-07!9;CL:0000144!8.02e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0002620;6.02e-14;23!CL:0000057;4.50e-11;73!CL:0002570;1.32e-10;8!CL:0000723;5.37e-09;61!CL:0002320;1.01e-08;188!CL:0002334;3.06e-08;12!CL:0000034;9.59e-08;69!CL:0000188;1.73e-07;9!CL:0000048;2.10e-07;58!CL:0000134;2.10e-07;55!CL:0000138;4.03e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.12e-28,76;CL:0000048,2.94e-17,427;CL:0000723,1.21e-16,433;CL:0000034,7.50e-16,441;CL:0002320,1.10e-15,361;CL:0002620,6.79e-14,23;CL:0000134,3.36e-13,354;CL:0002570,9.74e-11,8;CL:0000219,1.06e-10,386;CL:0002334,1.79e-08,12;CL:0000188,1.85e-07,9;CL:0000058,6.03e-07,6;CL:0000138,6.03e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.23e-09;5!DOID:450;1.23e-09;5!DOID:66;1.23e-09;5!DOID:423;1.23e-09;5!DOID:0080000;1.23e-09;5!DOID:11722;1.23e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.23e-09,5;DOID:450,1.23e-09,5;DOID:66,1.23e-09,5;DOID:423,1.23e-09,5;DOID:0080000,1.23e-09,5;DOID:11722,1.23e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!2.39e-14!83;UBERON:0002329!2.39e-14!83;UBERON:0003077!2.39e-14!83;UBERON:0003059!2.39e-14!83;UBERON:0007282!2.39e-14!83;UBERON:0009618!2.39e-14!83;UBERON:0007285!2.39e-14!83;UBERON:0002384!5.22e-12!375;UBERON:0004290!5.79e-12!70;UBERON:0003102!1.86e-11!95;UBERON:0002199!7.98e-11!45;UBERON:0002416!7.98e-11!45;UBERON:0001134!1.04e-10!61;UBERON:0002036!1.04e-10!61;UBERON:0003082!1.04e-10!61;UBERON:0002385!1.43e-10!63;UBERON:0001015!1.43e-10!63;UBERON:0000383!1.43e-10!63;UBERON:0005256!2.22e-10!143;UBERON:0000486!2.13e-09!82;UBERON:0002097!3.04e-09!40;UBERON:0002100!3.07e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;1.01e-10;198!UBERON:0002097;1.32e-09;41!UBERON:0002199;2.76e-09;46!UBERON:0002416;2.76e-09;46!UBERON:0003102;4.51e-08;50!UBERON:0001013;4.46e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.17e-15,371;UBERON:0003102,1.81e-13,99;UBERON:0002199,1.96e-13,46;UBERON:0002416,1.96e-13,46;UBERON:0002097,1.10e-11,41;UBERON:0001013,3.63e-07,14 | |||
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| |||
|short_description=p@chr2:238245089..238245122,- | |||
}} |
Revision as of 17:36, 12 September 2013
Short description: | p@chr2:238245089..238245122, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:238245089..238245122, - |
Coexpression cluster: | C332_Fibroblast_Smooth_Mesenchymal_mesenchymal_Chondrocyte_Skeletal_Pericytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.12e-28 | 76 |
multi fate stem cell | 2.94e-17 | 427 |
somatic stem cell | 1.21e-16 | 433 |
stem cell | 7.50e-16 | 441 |
connective tissue cell | 1.10e-15 | 361 |
skin fibroblast | 6.79e-14 | 23 |
mesenchymal cell | 3.36e-13 | 354 |
mesenchymal stem cell of adipose | 9.74e-11 | 8 |
motile cell | 1.06e-10 | 386 |
preadipocyte | 1.79e-08 | 12 |
cell of skeletal muscle | 1.85e-07 | 9 |
chondroblast | 6.03e-07 | 6 |
chondrocyte | 6.03e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.17e-15 | 371 |
surface structure | 1.81e-13 | 99 |
integument | 1.96e-13 | 46 |
integumental system | 1.96e-13 | 46 |
skin of body | 1.10e-11 | 41 |
adipose tissue | 3.63e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.23e-09 | 5 |
myotonic disease | 1.23e-09 | 5 |
muscle tissue disease | 1.23e-09 | 5 |
myopathy | 1.23e-09 | 5 |
muscular disease | 1.23e-09 | 5 |
myotonic dystrophy | 1.23e-09 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.