FFCP PHASE1:Mm9::chr12:56547913..56547919,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=190|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:56547913..56547919,+|id=chr12:56547913..56547919,+|ontology_enrichment_celltype=CL:0000084!1.53e-11!11;CL:0000827!1.53e-11!11;CL:0000838!2.86e-10!12;CL:0000791!3.03e-10!9;CL:0000789!3.03e-10!9;CL:0002420!3.03e-10!9;CL:0002419!3.03e-10!9;CL:0000790!3.03e-10!9;CL:0002563!2.29e-09!9;CL:0002251!2.29e-09!9;CL:0000063!2.89e-09!66;CL:0000624!2.98e-09!8;CL:0000542!3.35e-09!13;CL:0000051!3.35e-09!13;CL:0000239!3.07e-07!6;CL:0000677!3.07e-07!6;CL:0000212!3.07e-07!6;CL:0000584!3.07e-07!6;CL:0000893!4.32e-07!6;CL:0002489!4.32e-07!6;CL:0000898!4.32e-07!6;CL:0000809!4.32e-07!6;CL:0000810!4.32e-07!6;CL:0000895!4.32e-07!6;CL:0000808!4.32e-07!6;CL:0000894!4.32e-07!6;CL:0000806!4.32e-07!6;CL:0000807!4.32e-07!6;CL:0000805!4.32e-07!6;CL:0002425!4.32e-07!6;CL:0002436!4.32e-07!6;CL:0002427!4.32e-07!6;CL:0002428!4.32e-07!6;CL:0002429!4.32e-07!6;CL:0002433!4.32e-07!6;CL:0002431!4.32e-07!6;CL:0002432!4.32e-07!6|ontology_enrichment_celltype_v019_2=CL:0000791,1.66e-32,9;CL:0000789,1.66e-32,9;CL:0002420,1.66e-32,9;CL:0002419,1.66e-32,9;CL:0000790,1.66e-32,9;CL:0000624,2.11e-28,8;CL:0000084,1.93e-26,11;CL:0000827,1.93e-26,11;CL:0000838,3.65e-24,12;CL:0000542,3.09e-22,13;CL:0000051,3.09e-22,13;CL:0000893,1.30e-19,6;CL:0002489,1.30e-19,6;CL:0000898,1.30e-19,6;CL:0000809,1.30e-19,6;CL:0000810,1.30e-19,6;CL:0000895,1.30e-19,6;CL:0000808,1.30e-19,6;CL:0000894,1.30e-19,6;CL:0000806,1.30e-19,6;CL:0000807,1.30e-19,6;CL:0000805,1.30e-19,6;CL:0002425,1.30e-19,6;CL:0002436,1.30e-19,6;CL:0002427,1.30e-19,6;CL:0002428,1.30e-19,6;CL:0002429,1.30e-19,6;CL:0002433,1.30e-19,6;CL:0002431,1.30e-19,6;CL:0002432,1.30e-19,6;CL:0000738,8.70e-17,17;CL:0002087,8.70e-17,17;CL:0000239,1.19e-12,6;CL:0000677,1.19e-12,6;CL:0000584,1.19e-12,6;CL:0002031,4.18e-11,25;CL:0000075,7.17e-11,7;CL:0002563,1.72e-08,9;CL:0002251,1.72e-08,9;CL:0000988,1.86e-08,32;CL:0002032,1.86e-08,32;CL:0000037,1.86e-08,32;CL:0000837,1.86e-08,32;CL:0002320,4.00e-07,46;CL:0000134,4.00e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.08e-12!15;UBERON:0001242!9.47e-11!13;UBERON:0000060!9.47e-11!13;UBERON:0001262!9.47e-11!13;UBERON:0004786!9.47e-11!13;UBERON:0003350!2.29e-09!9;UBERON:0004808!2.29e-09!9;UBERON:0001277!2.29e-09!9;UBERON:0006562!1.09e-07!24;UBERON:0001557!1.09e-07!24;UBERON:0001042!1.09e-07!24;UBERON:0008814!1.09e-07!24;UBERON:0009145!1.09e-07!24;UBERON:0000485!3.52e-07!11;UBERON:0004923!4.25e-07!24;UBERON:0002370!5.08e-07!23;UBERON:0000974!5.08e-07!23;UBERON:0004807!5.08e-07!23;UBERON:0005058!5.08e-07!23;UBERON:0003351!5.08e-07!23;UBERON:0009113!5.08e-07!23;UBERON:0003295!5.08e-07!23;UBERON:0009722!5.08e-07!23;UBERON:0005562!5.08e-07!23;UBERON:0007690!5.08e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.19e-14,15;UBERON:0001242,1.11e-12,13;UBERON:0001262,1.11e-12,13;UBERON:0004786,1.11e-12,13;UBERON:0004923,6.92e-09,24;UBERON:0003350,1.72e-08,9;UBERON:0004808,1.72e-08,9;UBERON:0001277,1.72e-08,9;UBERON:0003929,3.95e-07,55;UBERON:0002384,4.00e-07,46;UBERON:0000485,5.71e-07,11;UBERON:0000160,9.09e-07,31|phase1_expression=0,0.697950815278722,1.81999695755814,0.30246421130683,2.00358291978539,1.17515490338323,1.63528848416868,5.81054955487093,5.06839399746,8.89445200023575,1.19852577757853,0.159544317990673,1.36960583944965,1.66098764596095,0.333109761815663,0,0,0.630924330716475,0.137114433605739,0,0.17008658030214,0.198581902401771,0.522399578277871,0.799962113967033,1.37645568640302,0.57423196411502,1.7230479846363,0.430942465371778,0.190023419456374,0,1.99557459589774,0,0,0,0.866554859253824,0.332469290716985,0.204169356262369,0,0,0,0.588231488031014,0,0,0,0,0.183546752161682,0.782391344348039,0,0,0,0,0,0,1.45072428402269,1.34437519656986,0,0,0.515672092277442,0.404632921719196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0.0755715601067855,3.76823835312181,0,0,0,0,0,0,0.170430322578058,0,0.70667914902068,0,0,0,0,0,0,0,0,0,0,0,1.21786191324856,0,0.150722640552623,0,0,0,0,0,0.161766849947409,0,0,1.86391761218122,0,0,0,0.359445373517761,0.599902730993408,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0.199034266818493,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,0,0,1.98251269790279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0.238043640886014,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430846795465598,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0,0.214337035031592,0,0,0,0.304464949114599,0,0,0,0,0.161464426695906,0,0,0,0.291480836629851,0,0.170870880797853,0,0,0,0,0,0.339956859987711,0.279902904647316,0,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0.259229946583586,0,0,0.149516546043979,0,0,0,0,0.117357238645754,0.13020438484395,0,0,0,0.632022241256357,0.202725215290164,0,0.129920822977795,0.179026695667481,0,0,0,0.201932899896295,0.304827226619999,0.100826185136841,0.194915761479505,0.481059208201647,0.116876902181569,0.453460767230423,0,0,0,0,0.187682475451182,0.73260649706906,0.214368379079066,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0.192906610981141,0,0,0,0.382576664137687,0,0|short_description=p@chr12:56547913..56547919,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=190 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:56547913..56547919,+ | |||
|id=chr12:56547913..56547919,+ | |||
|ontology_enrichment_celltype=CL:0000084!1.53e-11!11;CL:0000827!1.53e-11!11;CL:0000838!2.86e-10!12;CL:0000791!3.03e-10!9;CL:0000789!3.03e-10!9;CL:0002420!3.03e-10!9;CL:0002419!3.03e-10!9;CL:0000790!3.03e-10!9;CL:0002563!2.29e-09!9;CL:0002251!2.29e-09!9;CL:0000063!2.89e-09!66;CL:0000624!2.98e-09!8;CL:0000542!3.35e-09!13;CL:0000051!3.35e-09!13;CL:0000239!3.07e-07!6;CL:0000677!3.07e-07!6;CL:0000212!3.07e-07!6;CL:0000584!3.07e-07!6;CL:0000893!4.32e-07!6;CL:0002489!4.32e-07!6;CL:0000898!4.32e-07!6;CL:0000809!4.32e-07!6;CL:0000810!4.32e-07!6;CL:0000895!4.32e-07!6;CL:0000808!4.32e-07!6;CL:0000894!4.32e-07!6;CL:0000806!4.32e-07!6;CL:0000807!4.32e-07!6;CL:0000805!4.32e-07!6;CL:0002425!4.32e-07!6;CL:0002436!4.32e-07!6;CL:0002427!4.32e-07!6;CL:0002428!4.32e-07!6;CL:0002429!4.32e-07!6;CL:0002433!4.32e-07!6;CL:0002431!4.32e-07!6;CL:0002432!4.32e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.66e-32,9;CL:0000789,1.66e-32,9;CL:0002420,1.66e-32,9;CL:0002419,1.66e-32,9;CL:0000790,1.66e-32,9;CL:0000624,2.11e-28,8;CL:0000084,1.93e-26,11;CL:0000827,1.93e-26,11;CL:0000838,3.65e-24,12;CL:0000542,3.09e-22,13;CL:0000051,3.09e-22,13;CL:0000893,1.30e-19,6;CL:0002489,1.30e-19,6;CL:0000898,1.30e-19,6;CL:0000809,1.30e-19,6;CL:0000810,1.30e-19,6;CL:0000895,1.30e-19,6;CL:0000808,1.30e-19,6;CL:0000894,1.30e-19,6;CL:0000806,1.30e-19,6;CL:0000807,1.30e-19,6;CL:0000805,1.30e-19,6;CL:0002425,1.30e-19,6;CL:0002436,1.30e-19,6;CL:0002427,1.30e-19,6;CL:0002428,1.30e-19,6;CL:0002429,1.30e-19,6;CL:0002433,1.30e-19,6;CL:0002431,1.30e-19,6;CL:0002432,1.30e-19,6;CL:0000738,8.70e-17,17;CL:0002087,8.70e-17,17;CL:0000239,1.19e-12,6;CL:0000677,1.19e-12,6;CL:0000584,1.19e-12,6;CL:0002031,4.18e-11,25;CL:0000075,7.17e-11,7;CL:0002563,1.72e-08,9;CL:0002251,1.72e-08,9;CL:0000988,1.86e-08,32;CL:0002032,1.86e-08,32;CL:0000037,1.86e-08,32;CL:0000837,1.86e-08,32;CL:0002320,4.00e-07,46;CL:0000134,4.00e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.08e-12!15;UBERON:0001242!9.47e-11!13;UBERON:0000060!9.47e-11!13;UBERON:0001262!9.47e-11!13;UBERON:0004786!9.47e-11!13;UBERON:0003350!2.29e-09!9;UBERON:0004808!2.29e-09!9;UBERON:0001277!2.29e-09!9;UBERON:0006562!1.09e-07!24;UBERON:0001557!1.09e-07!24;UBERON:0001042!1.09e-07!24;UBERON:0008814!1.09e-07!24;UBERON:0009145!1.09e-07!24;UBERON:0000485!3.52e-07!11;UBERON:0004923!4.25e-07!24;UBERON:0002370!5.08e-07!23;UBERON:0000974!5.08e-07!23;UBERON:0004807!5.08e-07!23;UBERON:0005058!5.08e-07!23;UBERON:0003351!5.08e-07!23;UBERON:0009113!5.08e-07!23;UBERON:0003295!5.08e-07!23;UBERON:0009722!5.08e-07!23;UBERON:0005562!5.08e-07!23;UBERON:0007690!5.08e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.19e-14,15;UBERON:0001242,1.11e-12,13;UBERON:0001262,1.11e-12,13;UBERON:0004786,1.11e-12,13;UBERON:0004923,6.92e-09,24;UBERON:0003350,1.72e-08,9;UBERON:0004808,1.72e-08,9;UBERON:0001277,1.72e-08,9;UBERON:0003929,3.95e-07,55;UBERON:0002384,4.00e-07,46;UBERON:0000485,5.71e-07,11;UBERON:0000160,9.09e-07,31 | |||
|phase1_expression=0,0.697950815278722,1.81999695755814,0.30246421130683,2.00358291978539,1.17515490338323,1.63528848416868,5.81054955487093,5.06839399746,8.89445200023575,1.19852577757853,0.159544317990673,1.36960583944965,1.66098764596095,0.333109761815663,0,0,0.630924330716475,0.137114433605739,0,0.17008658030214,0.198581902401771,0.522399578277871,0.799962113967033,1.37645568640302,0.57423196411502,1.7230479846363,0.430942465371778,0.190023419456374,0,1.99557459589774,0,0,0,0.866554859253824,0.332469290716985,0.204169356262369,0,0,0,0.588231488031014,0,0,0,0,0.183546752161682,0.782391344348039,0,0,0,0,0,0,1.45072428402269,1.34437519656986,0,0,0.515672092277442,0.404632921719196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0.0755715601067855,3.76823835312181,0,0,0,0,0,0,0.170430322578058,0,0.70667914902068,0,0,0,0,0,0,0,0,0,0,0,1.21786191324856,0,0.150722640552623,0,0,0,0,0,0.161766849947409,0,0,1.86391761218122,0,0,0,0.359445373517761,0.599902730993408,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0.199034266818493,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,0,0,1.98251269790279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0.238043640886014,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430846795465598,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0,0.214337035031592,0,0,0,0.304464949114599,0,0,0,0,0.161464426695906,0,0,0,0.291480836629851,0,0.170870880797853,0,0,0,0,0,0.339956859987711,0.279902904647316,0,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0.259229946583586,0,0,0.149516546043979,0,0,0,0,0.117357238645754,0.13020438484395,0,0,0,0.632022241256357,0.202725215290164,0,0.129920822977795,0.179026695667481,0,0,0,0.201932899896295,0.304827226619999,0.100826185136841,0.194915761479505,0.481059208201647,0.116876902181569,0.453460767230423,0,0,0,0,0.187682475451182,0.73260649706906,0.214368379079066,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0.192906610981141,0,0,0,0.382576664137687,0,0 | |||
|short_description=p@chr12:56547913..56547919,+ | |||
}} |
Revision as of 22:57, 12 September 2013
Short description: | p@chr12:56547913..56547919, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:56547913..56547919, + |
Coexpression cluster: | MCL_coexpression_mm9:190 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucosa | 1.19e-14 | 15 |
intestinal mucosa | 1.11e-12 | 13 |
wall of intestine | 1.11e-12 | 13 |
gastrointestinal system mucosa | 1.11e-12 | 13 |
organ component layer | 6.92e-09 | 24 |
epithelium of mucosa | 1.72e-08 | 9 |
gastrointestinal system epithelium | 1.72e-08 | 9 |
intestinal epithelium | 1.72e-08 | 9 |
gut epithelium | 3.95e-07 | 55 |
connective tissue | 4.00e-07 | 46 |
simple columnar epithelium | 5.71e-07 | 11 |
intestine | 9.09e-07 | 31 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.