FFCP PHASE1:Mm9::chr12:74750260..74750280,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=84|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:74750260..74750280,+|id=chr12:74750260..74750280,+|ontology_enrichment_celltype=CL:0000624!1.85e-13!8;CL:0000791!7.60e-12!9;CL:0000789!7.60e-12!9;CL:0002420!7.60e-12!9;CL:0002419!7.60e-12!9;CL:0000790!7.60e-12!9;CL:0000084!1.69e-09!11;CL:0000827!1.69e-09!11;CL:0000893!2.93e-09!6;CL:0002489!2.93e-09!6;CL:0000898!2.93e-09!6;CL:0000809!2.93e-09!6;CL:0000810!2.93e-09!6;CL:0000895!2.93e-09!6;CL:0000808!2.93e-09!6;CL:0000894!2.93e-09!6;CL:0000806!2.93e-09!6;CL:0000807!2.93e-09!6;CL:0000805!2.93e-09!6;CL:0002425!2.93e-09!6;CL:0002436!2.93e-09!6;CL:0002427!2.93e-09!6;CL:0002428!2.93e-09!6;CL:0002429!2.93e-09!6;CL:0002433!2.93e-09!6;CL:0002431!2.93e-09!6;CL:0002432!2.93e-09!6;CL:0000838!1.28e-08!12;CL:0000542!7.13e-08!13;CL:0000051!7.13e-08!13|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000007!2.09e-11!8;UBERON:0003296!2.09e-11!8;UBERON:0010133!2.09e-11!8;UBERON:0002368!1.10e-09!60;UBERON:0000072!2.80e-09!27;UBERON:0001894!5.99e-09!10;UBERON:0006222!5.99e-09!10;UBERON:0002530!1.33e-08!65;UBERON:0002370!1.59e-07!23;UBERON:0000974!1.59e-07!23;UBERON:0004807!1.59e-07!23;UBERON:0005058!1.59e-07!23;UBERON:0003351!1.59e-07!23;UBERON:0009113!1.59e-07!23;UBERON:0003295!1.59e-07!23;UBERON:0009722!1.59e-07!23;UBERON:0005562!1.59e-07!23;UBERON:0007690!1.59e-07!23;UBERON:0000949!2.40e-07!72;UBERON:0006562!3.90e-07!24;UBERON:0003408!3.90e-07!24;UBERON:0001557!3.90e-07!24;UBERON:0001042!3.90e-07!24;UBERON:0008814!3.90e-07!24;UBERON:0009145!3.90e-07!24;UBERON:0004177!7.00e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0000007,9.59e-46,8;UBERON:0003296,9.59e-46,8;UBERON:0010133,9.59e-46,8;UBERON:0001894,9.57e-37,10;UBERON:0006222,9.57e-37,10;UBERON:0002780,8.12e-10,39;UBERON:0001890,8.12e-10,39;UBERON:0006240,8.12e-10,39;UBERON:0003080,1.40e-09,40;UBERON:0002368,3.96e-09,60;UBERON:0002530,1.88e-08,65;UBERON:0002616,2.22e-08,46;UBERON:0000955,3.29e-08,47;UBERON:0006238,3.29e-08,47;UBERON:0003056,6.88e-08,49;UBERON:0000949,1.17e-07,72;UBERON:0001049,1.88e-07,52;UBERON:0005068,1.88e-07,52;UBERON:0006241,1.88e-07,52;UBERON:0007135,1.88e-07,52;UBERON:0000073,3.45e-07,54|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0.281577444303333,0.468129052643987,0.171217968225505,0.0797721589953364,0,0.174840804837995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,0,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.4476951624886,0,0,0.214337035031592,1.95074257006501,4.8159580752559,4.93647061806363,3.34911444026059,0.23467170806371,0.21183207086382,0,0,0,0,0,0.164140899745061,0,0,0,0,0.185194527369712,0,0,0,0.169978429993855,0,0,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0.120195449519969,0,0,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0.476293691283074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p@chr12:74750260..74750280,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=84 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:74750260..74750280,+ | |||
|id=chr12:74750260..74750280,+ | |||
|ontology_enrichment_celltype=CL:0000624!1.85e-13!8;CL:0000791!7.60e-12!9;CL:0000789!7.60e-12!9;CL:0002420!7.60e-12!9;CL:0002419!7.60e-12!9;CL:0000790!7.60e-12!9;CL:0000084!1.69e-09!11;CL:0000827!1.69e-09!11;CL:0000893!2.93e-09!6;CL:0002489!2.93e-09!6;CL:0000898!2.93e-09!6;CL:0000809!2.93e-09!6;CL:0000810!2.93e-09!6;CL:0000895!2.93e-09!6;CL:0000808!2.93e-09!6;CL:0000894!2.93e-09!6;CL:0000806!2.93e-09!6;CL:0000807!2.93e-09!6;CL:0000805!2.93e-09!6;CL:0002425!2.93e-09!6;CL:0002436!2.93e-09!6;CL:0002427!2.93e-09!6;CL:0002428!2.93e-09!6;CL:0002429!2.93e-09!6;CL:0002433!2.93e-09!6;CL:0002431!2.93e-09!6;CL:0002432!2.93e-09!6;CL:0000838!1.28e-08!12;CL:0000542!7.13e-08!13;CL:0000051!7.13e-08!13 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000007!2.09e-11!8;UBERON:0003296!2.09e-11!8;UBERON:0010133!2.09e-11!8;UBERON:0002368!1.10e-09!60;UBERON:0000072!2.80e-09!27;UBERON:0001894!5.99e-09!10;UBERON:0006222!5.99e-09!10;UBERON:0002530!1.33e-08!65;UBERON:0002370!1.59e-07!23;UBERON:0000974!1.59e-07!23;UBERON:0004807!1.59e-07!23;UBERON:0005058!1.59e-07!23;UBERON:0003351!1.59e-07!23;UBERON:0009113!1.59e-07!23;UBERON:0003295!1.59e-07!23;UBERON:0009722!1.59e-07!23;UBERON:0005562!1.59e-07!23;UBERON:0007690!1.59e-07!23;UBERON:0000949!2.40e-07!72;UBERON:0006562!3.90e-07!24;UBERON:0003408!3.90e-07!24;UBERON:0001557!3.90e-07!24;UBERON:0001042!3.90e-07!24;UBERON:0008814!3.90e-07!24;UBERON:0009145!3.90e-07!24;UBERON:0004177!7.00e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,9.59e-46,8;UBERON:0003296,9.59e-46,8;UBERON:0010133,9.59e-46,8;UBERON:0001894,9.57e-37,10;UBERON:0006222,9.57e-37,10;UBERON:0002780,8.12e-10,39;UBERON:0001890,8.12e-10,39;UBERON:0006240,8.12e-10,39;UBERON:0003080,1.40e-09,40;UBERON:0002368,3.96e-09,60;UBERON:0002530,1.88e-08,65;UBERON:0002616,2.22e-08,46;UBERON:0000955,3.29e-08,47;UBERON:0006238,3.29e-08,47;UBERON:0003056,6.88e-08,49;UBERON:0000949,1.17e-07,72;UBERON:0001049,1.88e-07,52;UBERON:0005068,1.88e-07,52;UBERON:0006241,1.88e-07,52;UBERON:0007135,1.88e-07,52;UBERON:0000073,3.45e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0.281577444303333,0.468129052643987,0.171217968225505,0.0797721589953364,0,0.174840804837995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,0,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.4476951624886,0,0,0.214337035031592,1.95074257006501,4.8159580752559,4.93647061806363,3.34911444026059,0.23467170806371,0.21183207086382,0,0,0,0,0,0.164140899745061,0,0,0,0,0.185194527369712,0,0,0,0.169978429993855,0,0,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0.120195449519969,0,0,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0.476293691283074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr12:74750260..74750280,+ | |||
}} |
Revision as of 23:10, 12 September 2013
Short description: | p@chr12:74750260..74750280, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:74750260..74750280, + |
Coexpression cluster: | MCL_coexpression_mm9:84 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pituitary gland | 9.59e-46 | 8 |
gland of diencephalon | 9.59e-46 | 8 |
neuroendocrine gland | 9.59e-46 | 8 |
diencephalon | 9.57e-37 | 10 |
future diencephalon | 9.57e-37 | 10 |
regional part of forebrain | 8.12e-10 | 39 |
forebrain | 8.12e-10 | 39 |
future forebrain | 8.12e-10 | 39 |
anterior neural tube | 1.40e-09 | 40 |
endocrine gland | 3.96e-09 | 60 |
gland | 1.88e-08 | 65 |
regional part of brain | 2.22e-08 | 46 |
brain | 3.29e-08 | 47 |
future brain | 3.29e-08 | 47 |
pre-chordal neural plate | 6.88e-08 | 49 |
endocrine system | 1.17e-07 | 72 |
neural tube | 1.88e-07 | 52 |
neural rod | 1.88e-07 | 52 |
future spinal cord | 1.88e-07 | 52 |
neural keel | 1.88e-07 | 52 |
regional part of nervous system | 3.45e-07 | 54 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.