FFCP PHASE1:Mm9::chr13:19282202..19282218,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=2823|UniProt=|association_with_transcript=-6bp_to_uc011ywm.1_5end|description=CAGE_peak_1_at_uc011ywm.1_5end|id=chr13:19282202..19282218,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001004!1.46e-12!42;UBERON:0000065!9.21e-12!41;UBERON:0004177!1.73e-10!29;UBERON:0003408!2.12e-10!24;UBERON:0006562!5.06e-10!24;UBERON:0001557!5.06e-10!24;UBERON:0001042!5.06e-10!24;UBERON:0008814!5.06e-10!24;UBERON:0009145!5.06e-10!24;UBERON:0004921!8.97e-10!126;UBERON:0004185!8.97e-10!126;UBERON:0002370!1.51e-09!23;UBERON:0000974!1.51e-09!23;UBERON:0004807!1.51e-09!23;UBERON:0005058!1.51e-09!23;UBERON:0003351!1.51e-09!23;UBERON:0009113!1.51e-09!23;UBERON:0003295!1.51e-09!23;UBERON:0009722!1.51e-09!23;UBERON:0005562!1.51e-09!23;UBERON:0007690!1.51e-09!23;UBERON:0001007!2.22e-09!128;UBERON:0001555!2.22e-09!128;UBERON:0007026!2.22e-09!128;UBERON:0000077!5.11e-09!97;UBERON:0004119!5.31e-09!130;UBERON:0000925!5.31e-09!130;UBERON:0006595!5.31e-09!130;UBERON:0001041!1.22e-08!92;UBERON:0000072!2.70e-08!27|ontology_enrichment_uberon_v019_2=UBERON:0003408,4.60e-13,24;UBERON:0002370,5.78e-11,23;UBERON:0000974,5.78e-11,23;UBERON:0004807,5.78e-11,23;UBERON:0005058,5.78e-11,23;UBERON:0003351,5.78e-11,23;UBERON:0009113,5.78e-11,23;UBERON:0003295,5.78e-11,23;UBERON:0009722,5.78e-11,23;UBERON:0005562,5.78e-11,23;UBERON:0007690,5.78e-11,23;UBERON:0006562,1.85e-10,24;UBERON:0001557,1.85e-10,24;UBERON:0001042,1.85e-10,24;UBERON:0008814,1.85e-10,24;UBERON:0009145,1.85e-10,24;UBERON:0001004,2.61e-10,42;UBERON:0000072,3.60e-09,27;UBERON:0000065,8.86e-09,41;UBERON:0004177,1.85e-08,29;UBERON:0005057,1.85e-08,29;UBERON:0007811,3.04e-08,36;UBERON:0007023,1.16e-07,51;UBERON:0000077,8.22e-07,35|phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0,0,0,0,0.342401459862411,0.34968160967599,0.333109761815663,0,0,0,0,0,0.255129870453209,0.893618560807968,1.56719873483361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,11.6522047641227,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0.289198713839823,0,0,0,0,0,0,0,0.255457055208591,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.373220911830279,1.51633655060205,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0.219550115291051,0,0,0,0.330418782983798,0,0,0,0,0,0,0.380451252225118,0.949058123089023,0.329397909448022,1.50801125280162,0.795825888164603,0.58489226135736,0,0,0.398282546508734,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0.936113019343682,0,0.179397413521912,0,1.84753190166605,0,0,0,0,0.167506257441816,0,0.390267295715598,0.788175720530955,0.44292937929755,0.318909537314974,0.81931657357869,0.518054945597687,1.3018415272336,0,0,0.491764273019036,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,1.48473110675282,1.32745138339963,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31909002353184,0,0.180938774784468,0.238744688006273,1.14898629821543,0.291480836629851,0,0,0.206386867963223,0.740778109478847,0.188368457004691,0.27338845544205,0,0.339956859987711,0.279902904647316,0.138199973804424,1.90934123603023,0,0,0.108005340821801,0,0,0.269728692769641,0.247960367176008,0.26175594198403,0.388844919875379,1.24267862617385,0,0,0,0,0,0.168956125490778,0,0,0,0,0,1.58005560314089,2.22997736819181,6.88163413004343,12.2125573599127,7.6981479137017,8.14593554603186,3.846254384639,4.28299628806274,0.908698049533329,0.533447646584999,0.806609481094724,0.38983152295901,0.288635524920988,0.350630706544707,0.226730383615211,0,0,0,0.772758376128762,1.12609485270709,1.09890974560359,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0,0,0.263069711437843,0,0,0,0,0,0,0.192906610981141,0,0.233931608445408,0,0,0.441182838239031,0|short_description=p1@uc011ywm.1}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=2823 | |||
|UniProt= | |||
|association_with_transcript=-6bp_to_uc011ywm.1_5end | |||
|description=CAGE_peak_1_at_uc011ywm.1_5end | |||
|id=chr13:19282202..19282218,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!1.46e-12!42;UBERON:0000065!9.21e-12!41;UBERON:0004177!1.73e-10!29;UBERON:0003408!2.12e-10!24;UBERON:0006562!5.06e-10!24;UBERON:0001557!5.06e-10!24;UBERON:0001042!5.06e-10!24;UBERON:0008814!5.06e-10!24;UBERON:0009145!5.06e-10!24;UBERON:0004921!8.97e-10!126;UBERON:0004185!8.97e-10!126;UBERON:0002370!1.51e-09!23;UBERON:0000974!1.51e-09!23;UBERON:0004807!1.51e-09!23;UBERON:0005058!1.51e-09!23;UBERON:0003351!1.51e-09!23;UBERON:0009113!1.51e-09!23;UBERON:0003295!1.51e-09!23;UBERON:0009722!1.51e-09!23;UBERON:0005562!1.51e-09!23;UBERON:0007690!1.51e-09!23;UBERON:0001007!2.22e-09!128;UBERON:0001555!2.22e-09!128;UBERON:0007026!2.22e-09!128;UBERON:0000077!5.11e-09!97;UBERON:0004119!5.31e-09!130;UBERON:0000925!5.31e-09!130;UBERON:0006595!5.31e-09!130;UBERON:0001041!1.22e-08!92;UBERON:0000072!2.70e-08!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003408,4.60e-13,24;UBERON:0002370,5.78e-11,23;UBERON:0000974,5.78e-11,23;UBERON:0004807,5.78e-11,23;UBERON:0005058,5.78e-11,23;UBERON:0003351,5.78e-11,23;UBERON:0009113,5.78e-11,23;UBERON:0003295,5.78e-11,23;UBERON:0009722,5.78e-11,23;UBERON:0005562,5.78e-11,23;UBERON:0007690,5.78e-11,23;UBERON:0006562,1.85e-10,24;UBERON:0001557,1.85e-10,24;UBERON:0001042,1.85e-10,24;UBERON:0008814,1.85e-10,24;UBERON:0009145,1.85e-10,24;UBERON:0001004,2.61e-10,42;UBERON:0000072,3.60e-09,27;UBERON:0000065,8.86e-09,41;UBERON:0004177,1.85e-08,29;UBERON:0005057,1.85e-08,29;UBERON:0007811,3.04e-08,36;UBERON:0007023,1.16e-07,51;UBERON:0000077,8.22e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0,0,0,0,0.342401459862411,0.34968160967599,0.333109761815663,0,0,0,0,0,0.255129870453209,0.893618560807968,1.56719873483361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,11.6522047641227,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0.289198713839823,0,0,0,0,0,0,0,0.255457055208591,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.373220911830279,1.51633655060205,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0.219550115291051,0,0,0,0.330418782983798,0,0,0,0,0,0,0.380451252225118,0.949058123089023,0.329397909448022,1.50801125280162,0.795825888164603,0.58489226135736,0,0,0.398282546508734,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0.936113019343682,0,0.179397413521912,0,1.84753190166605,0,0,0,0,0.167506257441816,0,0.390267295715598,0.788175720530955,0.44292937929755,0.318909537314974,0.81931657357869,0.518054945597687,1.3018415272336,0,0,0.491764273019036,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,1.48473110675282,1.32745138339963,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31909002353184,0,0.180938774784468,0.238744688006273,1.14898629821543,0.291480836629851,0,0,0.206386867963223,0.740778109478847,0.188368457004691,0.27338845544205,0,0.339956859987711,0.279902904647316,0.138199973804424,1.90934123603023,0,0,0.108005340821801,0,0,0.269728692769641,0.247960367176008,0.26175594198403,0.388844919875379,1.24267862617385,0,0,0,0,0,0.168956125490778,0,0,0,0,0,1.58005560314089,2.22997736819181,6.88163413004343,12.2125573599127,7.6981479137017,8.14593554603186,3.846254384639,4.28299628806274,0.908698049533329,0.533447646584999,0.806609481094724,0.38983152295901,0.288635524920988,0.350630706544707,0.226730383615211,0,0,0,0.772758376128762,1.12609485270709,1.09890974560359,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0,0,0.263069711437843,0,0,0,0,0,0,0.192906610981141,0,0.233931608445408,0,0,0.441182838239031,0 | |||
|short_description=p1@uc011ywm.1 | |||
}} |
Revision as of 00:04, 13 September 2013
Short description: | p1@uc011ywm.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_uc011ywm.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2823 |
Association with transcript: | -6bp_to_uc011ywm.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gland of gut | 4.60e-13 | 24 |
thymus | 5.78e-11 | 23 |
neck | 5.78e-11 | 23 |
respiratory system epithelium | 5.78e-11 | 23 |
hemolymphoid system gland | 5.78e-11 | 23 |
pharyngeal epithelium | 5.78e-11 | 23 |
thymic region | 5.78e-11 | 23 |
pharyngeal gland | 5.78e-11 | 23 |
entire pharyngeal arch endoderm | 5.78e-11 | 23 |
thymus primordium | 5.78e-11 | 23 |
early pharyngeal endoderm | 5.78e-11 | 23 |
pharynx | 1.85e-10 | 24 |
upper respiratory tract | 1.85e-10 | 24 |
chordate pharynx | 1.85e-10 | 24 |
pharyngeal arch system | 1.85e-10 | 24 |
pharyngeal region of foregut | 1.85e-10 | 24 |
respiratory system | 2.61e-10 | 42 |
segment of respiratory tract | 3.60e-09 | 27 |
respiratory tract | 8.86e-09 | 41 |
hemopoietic organ | 1.85e-08 | 29 |
immune organ | 1.85e-08 | 29 |
craniocervical region | 3.04e-08 | 36 |
adult organism | 1.16e-07 | 51 |
mixed endoderm/mesoderm-derived structure | 8.22e-07 | 35 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.