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FFCP PHASE1:Mm9::chr13:47289218..47289237,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=218215|HGNC=|MCL_coexpression_id=8|UniProt=Q8BKD6|association_with_transcript=-134bp_to_ENSMUST00000110111,NM_001170643,uc007qhz.2_5end|description=CAGE_peak_3_at_Rnf144b_5end|id=chr13:47289218..47289237,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,2.74e-07,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!8.22e-11!22;UBERON:0007499!8.22e-11!22;UBERON:0006925!8.22e-11!22;UBERON:0009497!8.22e-11!22;UBERON:0000015!8.22e-11!22;UBERON:0002423!8.22e-11!22;UBERON:0006235!8.22e-11!22;UBERON:0008835!8.22e-11!22;UBERON:0003894!8.22e-11!22;UBERON:0004161!8.22e-11!22;UBERON:0008836!8.22e-11!22;UBERON:0002365!2.59e-10!25;UBERON:0002330!2.59e-10!25;UBERON:0009854!1.09e-09!23;UBERON:0009856!1.09e-09!23|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.06e-16,22;UBERON:0007499,6.06e-16,22;UBERON:0006925,6.06e-16,22;UBERON:0009497,6.06e-16,22;UBERON:0000015,6.06e-16,22;UBERON:0002423,6.06e-16,22;UBERON:0006235,6.06e-16,22;UBERON:0008835,6.06e-16,22;UBERON:0003894,6.06e-16,22;UBERON:0004161,6.06e-16,22;UBERON:0008836,6.06e-16,22;UBERON:0009854,5.89e-15,23;UBERON:0009856,5.89e-15,23;UBERON:0002365,8.07e-15,25;UBERON:0002330,8.07e-15,25;UBERON:0005172,1.64e-10,49;UBERON:0005173,1.64e-10,49;UBERON:0002417,1.64e-10,49;UBERON:0000916,1.64e-10,49;UBERON:0003914,2.33e-10,47;UBERON:0005256,1.92e-09,45;UBERON:0009569,2.76e-09,66;UBERON:0005177,1.69e-07,79;UBERON:0001048,3.82e-07,134;UBERON:0003104,5.06e-07,61;UBERON:0009142,5.06e-07,61|phase1_expression=0.320297694209588,0,0,0.90739263392049,0,0.33575854382378,0.467225281191051,0.129123323441576,0,0,0,0,0,0,0.666219523631325,0.809901069559304,0.699561878128147,1.41957974411207,1.37114433605739,0.84877930359606,0.935476191661768,0,0,0.47997726838022,0.22940928106717,0,0,0,0,0.252030129759931,0,0,0,0,0.577703239502549,0,0.408338712524738,0.418531630736908,0.7813353445238,2.09409497589519,1.76469446409304,0,1.94204141212461,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0.286533439938757,0,0,1.05798195854407,0,0,0,0.899899717281399,1.97773272513395,1.4209602298922,0.299600110518405,0,0.103689612308478,0,0,0.571301968807607,0.441737081903227,0,0,0,4.40463523997555,0.638436690425939,1.22885226604995,0,0.457438218012048,0.52091337055676,1.11673199600552,0.56276261003168,0.61119299110724,0.589257170947335,0.569486723196412,0.372798891650601,0,0,3.47837386442013,18.0689014166091,19.7191686775248,23.2072372404261,26.6408331153544,22.4013443548668,4.63466586434781,0,0,0,0,0,0,0,0,0,0.505524445014783,2.74041311325744,1.29468941823586,0.445326417194474,0,0,0,0.301445281105245,0,0.376999773989026,3.95511948374998,1.3013942122792,3.5384422077995,0.161766849947409,1.54589062922275,1.45462575940567,0,0.585561594023094,1.46612694769419,0.510914110417183,0.359445373517761,0,0.381210681219194,0.748953197024114,0.915001205637253,0.251308704225729,0.695297280769106,1.53429274398198,0.62336413367868,0.648965052271031,0.101839363850316,1.24406970610093,1.76905930903572,0.631325567659422,0.390361328888111,1.14951052216736,0.900310649026746,4.06903008156431,4.150226448231,4.22775276940004,5.05989312622536,1.03481348295606,0,0.189106080167819,0.351902248327898,0.219195732427575,0.556094498451196,0.696504333044333,0.411564272815887,0,0,0.257347907114715,1.98914449576915,0.414251545071004,0,0.540186184383045,0.710234206755631,0,0.154267112887378,0.465067889500816,0.536546802799238,0.583826711835847,0.493679549740441,1.14917224855367,1.21603214318784,3.21639972335731,1.97595103761946,2.28150911892632,0.210289948564127,0.102904612379284,0.660837565967596,0.264450566663544,0,0,0.38660238396628,0.605050573870028,0.889512175379481,0,0.474529061544512,0.329397909448022,0.754005626400808,0.994782360205754,0.38992817423824,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0.280543279561274,0.316182685621286,0.295220295959204,0.156998727841375,0.370191491765402,11.2651998293117,0.333690211432188,0.196558995113203,0.674586337154561,2.23146133527353,2.17059443777175,3.8193877767213,3.16465751195892,0.486405680325106,6.31491250332587,10.0637744569148,5.58211421502755,14.6657706363843,17.6805214562978,14.1723956682311,11.5786445127208,2.03228509183265,0,0,0.339490171550376,0.234690248288502,0.335012514883631,0,0.195133647857799,0.315270288212382,1.55025282754142,0.956728611944923,1.63863314715738,2.07221978239075,1.73578870297814,0,0,0.983528546038072,1.93155722413313,0.642202359951168,0.937693492737625,0,0.757412781613119,0.315508219416257,0.390438744296638,0.430846795465598,0,0.222798674082394,0.283076530788832,0.404810701674894,0,0,0.642642632843614,3.26462195979018,0.178065603667255,0.651547837414304,8.41347627159931,0,0,0,0,0,0.307435147943927,0.516856586336442,0,0.712994756769443,0,0,1.03135543248187,0,0,0.129358683782755,0.428674070063185,0.177340233642274,0.713475270408282,0.493647061806363,0.304464949114599,1.40803024838226,1.0591603543191,0.661585194164886,0.98931751764888,0.322928853391811,0.120625849856312,0.477489376012546,0.984845398470368,0.291480836629851,1.48340241608408,2.22132145037209,1.03193433981611,2.22233432843654,1.88368457004691,1.91371918809435,1.83022538565218,0,0.139951452323658,0.414599921413271,0.954670618015114,0.316335993581135,0.406638934253697,0.540026704109006,0.627264888043406,0.87345025498471,0.539457385539283,0.991841468704031,0.785267825952089,0.259229946583586,0,0,0,0,0.194451188344048,0.129159823477731,0,0.234714477291508,0.2604087696879,0.209718688851422,0.241584120826006,0.864090018773596,1.58005560314089,0.405450430580328,0.205421914329655,0.389762468933385,0.179026695667481,0.596044064343795,0.360586348559907,0,0.302899349844443,0.15241361331,0.403304740547362,1.07203668813728,0.769694733122636,0.233753804363138,1.36038230169127,1.55390167361845,0.0897138566094757,0.167884616364078,15.4551675225752,1.31377732815827,2.01466786693992,1.71494703263253,1.00314420807073,1.6942555278512,0,1.14579102687879,0.859265911718438,0.685082519770642,2.2661816921691,0.675022500231806,0.45032120322422,0.906284817968409,0.51776031175182,0.31136204275253,0,0.170733605754134,0.243106717068294,0.419226325255965,0.919217542250071,0.666740183404846,0.412070114477788,1.60459604795908,0.758091635291392,0.25347929989024,0.565879024158229,0.936415074698824,0.960377286073039,0.804096565378586,0.476293691283074,0.347652977834566,0,0.824171801606613,1.17759136107518,1.37147700954166,0.70990322463735,1.1921809497366,0.436039249896986,0.752875043322645,0.507687647350059,1.46342378298218,0.263069711437843,0.814824683075171,1.68342681497322,0.593175090620871,0.689531376628944,1.63692417267876,0.77468420592983,0.385813221962283,0,1.16965804222704,0.859484216193193,1.14772999241306,1.10295709559758,1.62307484934295|short_description=p3@Rnf144b}}
|EntrezGene=218215
|HGNC=
|MCL_coexpression_id=8
|UniProt=Q8BKD6
|association_with_transcript=-134bp_to_ENSMUST00000110111,NM_001170643,uc007qhz.2_5end
|description=CAGE_peak_3_at_Rnf144b_5end
|id=chr13:47289218..47289237,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000182,2.74e-07,5
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002107!8.22e-11!22;UBERON:0007499!8.22e-11!22;UBERON:0006925!8.22e-11!22;UBERON:0009497!8.22e-11!22;UBERON:0000015!8.22e-11!22;UBERON:0002423!8.22e-11!22;UBERON:0006235!8.22e-11!22;UBERON:0008835!8.22e-11!22;UBERON:0003894!8.22e-11!22;UBERON:0004161!8.22e-11!22;UBERON:0008836!8.22e-11!22;UBERON:0002365!2.59e-10!25;UBERON:0002330!2.59e-10!25;UBERON:0009854!1.09e-09!23;UBERON:0009856!1.09e-09!23
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.06e-16,22;UBERON:0007499,6.06e-16,22;UBERON:0006925,6.06e-16,22;UBERON:0009497,6.06e-16,22;UBERON:0000015,6.06e-16,22;UBERON:0002423,6.06e-16,22;UBERON:0006235,6.06e-16,22;UBERON:0008835,6.06e-16,22;UBERON:0003894,6.06e-16,22;UBERON:0004161,6.06e-16,22;UBERON:0008836,6.06e-16,22;UBERON:0009854,5.89e-15,23;UBERON:0009856,5.89e-15,23;UBERON:0002365,8.07e-15,25;UBERON:0002330,8.07e-15,25;UBERON:0005172,1.64e-10,49;UBERON:0005173,1.64e-10,49;UBERON:0002417,1.64e-10,49;UBERON:0000916,1.64e-10,49;UBERON:0003914,2.33e-10,47;UBERON:0005256,1.92e-09,45;UBERON:0009569,2.76e-09,66;UBERON:0005177,1.69e-07,79;UBERON:0001048,3.82e-07,134;UBERON:0003104,5.06e-07,61;UBERON:0009142,5.06e-07,61
|phase1_expression=0.320297694209588,0,0,0.90739263392049,0,0.33575854382378,0.467225281191051,0.129123323441576,0,0,0,0,0,0,0.666219523631325,0.809901069559304,0.699561878128147,1.41957974411207,1.37114433605739,0.84877930359606,0.935476191661768,0,0,0.47997726838022,0.22940928106717,0,0,0,0,0.252030129759931,0,0,0,0,0.577703239502549,0,0.408338712524738,0.418531630736908,0.7813353445238,2.09409497589519,1.76469446409304,0,1.94204141212461,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0.286533439938757,0,0,1.05798195854407,0,0,0,0.899899717281399,1.97773272513395,1.4209602298922,0.299600110518405,0,0.103689612308478,0,0,0.571301968807607,0.441737081903227,0,0,0,4.40463523997555,0.638436690425939,1.22885226604995,0,0.457438218012048,0.52091337055676,1.11673199600552,0.56276261003168,0.61119299110724,0.589257170947335,0.569486723196412,0.372798891650601,0,0,3.47837386442013,18.0689014166091,19.7191686775248,23.2072372404261,26.6408331153544,22.4013443548668,4.63466586434781,0,0,0,0,0,0,0,0,0,0.505524445014783,2.74041311325744,1.29468941823586,0.445326417194474,0,0,0,0.301445281105245,0,0.376999773989026,3.95511948374998,1.3013942122792,3.5384422077995,0.161766849947409,1.54589062922275,1.45462575940567,0,0.585561594023094,1.46612694769419,0.510914110417183,0.359445373517761,0,0.381210681219194,0.748953197024114,0.915001205637253,0.251308704225729,0.695297280769106,1.53429274398198,0.62336413367868,0.648965052271031,0.101839363850316,1.24406970610093,1.76905930903572,0.631325567659422,0.390361328888111,1.14951052216736,0.900310649026746,4.06903008156431,4.150226448231,4.22775276940004,5.05989312622536,1.03481348295606,0,0.189106080167819,0.351902248327898,0.219195732427575,0.556094498451196,0.696504333044333,0.411564272815887,0,0,0.257347907114715,1.98914449576915,0.414251545071004,0,0.540186184383045,0.710234206755631,0,0.154267112887378,0.465067889500816,0.536546802799238,0.583826711835847,0.493679549740441,1.14917224855367,1.21603214318784,3.21639972335731,1.97595103761946,2.28150911892632,0.210289948564127,0.102904612379284,0.660837565967596,0.264450566663544,0,0,0.38660238396628,0.605050573870028,0.889512175379481,0,0.474529061544512,0.329397909448022,0.754005626400808,0.994782360205754,0.38992817423824,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0.280543279561274,0.316182685621286,0.295220295959204,0.156998727841375,0.370191491765402,11.2651998293117,0.333690211432188,0.196558995113203,0.674586337154561,2.23146133527353,2.17059443777175,3.8193877767213,3.16465751195892,0.486405680325106,6.31491250332587,10.0637744569148,5.58211421502755,14.6657706363843,17.6805214562978,14.1723956682311,11.5786445127208,2.03228509183265,0,0,0.339490171550376,0.234690248288502,0.335012514883631,0,0.195133647857799,0.315270288212382,1.55025282754142,0.956728611944923,1.63863314715738,2.07221978239075,1.73578870297814,0,0,0.983528546038072,1.93155722413313,0.642202359951168,0.937693492737625,0,0.757412781613119,0.315508219416257,0.390438744296638,0.430846795465598,0,0.222798674082394,0.283076530788832,0.404810701674894,0,0,0.642642632843614,3.26462195979018,0.178065603667255,0.651547837414304,8.41347627159931,0,0,0,0,0,0.307435147943927,0.516856586336442,0,0.712994756769443,0,0,1.03135543248187,0,0,0.129358683782755,0.428674070063185,0.177340233642274,0.713475270408282,0.493647061806363,0.304464949114599,1.40803024838226,1.0591603543191,0.661585194164886,0.98931751764888,0.322928853391811,0.120625849856312,0.477489376012546,0.984845398470368,0.291480836629851,1.48340241608408,2.22132145037209,1.03193433981611,2.22233432843654,1.88368457004691,1.91371918809435,1.83022538565218,0,0.139951452323658,0.414599921413271,0.954670618015114,0.316335993581135,0.406638934253697,0.540026704109006,0.627264888043406,0.87345025498471,0.539457385539283,0.991841468704031,0.785267825952089,0.259229946583586,0,0,0,0,0.194451188344048,0.129159823477731,0,0.234714477291508,0.2604087696879,0.209718688851422,0.241584120826006,0.864090018773596,1.58005560314089,0.405450430580328,0.205421914329655,0.389762468933385,0.179026695667481,0.596044064343795,0.360586348559907,0,0.302899349844443,0.15241361331,0.403304740547362,1.07203668813728,0.769694733122636,0.233753804363138,1.36038230169127,1.55390167361845,0.0897138566094757,0.167884616364078,15.4551675225752,1.31377732815827,2.01466786693992,1.71494703263253,1.00314420807073,1.6942555278512,0,1.14579102687879,0.859265911718438,0.685082519770642,2.2661816921691,0.675022500231806,0.45032120322422,0.906284817968409,0.51776031175182,0.31136204275253,0,0.170733605754134,0.243106717068294,0.419226325255965,0.919217542250071,0.666740183404846,0.412070114477788,1.60459604795908,0.758091635291392,0.25347929989024,0.565879024158229,0.936415074698824,0.960377286073039,0.804096565378586,0.476293691283074,0.347652977834566,0,0.824171801606613,1.17759136107518,1.37147700954166,0.70990322463735,1.1921809497366,0.436039249896986,0.752875043322645,0.507687647350059,1.46342378298218,0.263069711437843,0.814824683075171,1.68342681497322,0.593175090620871,0.689531376628944,1.63692417267876,0.77468420592983,0.385813221962283,0,1.16965804222704,0.859484216193193,1.14772999241306,1.10295709559758,1.62307484934295
|short_description=p3@Rnf144b
}}

Revision as of 00:39, 13 September 2013

Short description:p3@Rnf144b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Rnf144b_5end
Coexpression cluster:MCL_coexpression_mm9:8
Association with transcript: -134bp_to_ENSMUST00000110111, NM_001170643, uc007qhz.2_5end
EntrezGene:Rnf144b
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p3@Rnf144b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.42
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.37
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.48
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F718.07
Mouse hepatocyte, donor1.CNhs13078.11714-123C419.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C823.21
Mouse hepatocyte, donor6.CNhs13090.11822-124F426.64
Mouse hepatocyte, donor8.CNhs13091.11824-124F622.40
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.63
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.74
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A83.96
aorta, adult.CNhs10498.46-23H11.30
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.24
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D44.07
eyeball, neonate N00.CNhs11207.633-15C64.15
eyeball, neonate N01.CNhs11140.1532-43E74.23
eyeball, neonate N02.CNhs11205.1551-44G85.06
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.99
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G11.15
heart, neonate N16.CNhs11209.782-15G11.22
heart, neonate N20.CNhs11127.821-26I63.22
heart, neonate N25.CNhs11196.1351-25D31.98
heart, neonate N30.CNhs11202.1390-42D22.28
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B211.27
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D72.23
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A33.82
liver, embryo E18.CNhs10579.499-43G43.16
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G26.31
liver, neonate N06.CNhs11101.684-20A810.06
liver, neonate N07.CNhs11103.716-20H25.58
liver, neonate N10.CNhs11115.751-24B914.67
liver, neonate N20.CNhs11220.823-25A317.68
liver, neonate N25.CNhs11198.1368-26H114.17
liver, neonate N30.CNhs11106.1382-42D111.58
lung, adult.CNhs10474.28-22B12.03
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A41.64
lung, neonate N25.CNhs11119.1359-25C72.07
lung, neonate N30.CNhs11133.1394-42H21.74
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I73.26
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G68.41
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G22.22
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F22.22
spleen, neonate N10.CNhs11116.752-24D11.88
spleen, neonate N20.CNhs11112.824-19H11.91
spleen, neonate N25.CNhs11099.1354-25G31.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A21.07
thymus, neonate N25.CNhs11125.1362-25G70.77
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E415.46
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E52.01
vagina, adult.CNhs10502.89-27D51.71
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hepatocyte2.74e-075

Uber anatomy
Ontology termp-valuen
liver6.06e-1622
epithelial sac6.06e-1622
digestive gland6.06e-1622
epithelium of foregut-midgut junction6.06e-1622
anatomical boundary6.06e-1622
hepatobiliary system6.06e-1622
foregut-midgut junction6.06e-1622
hepatic diverticulum6.06e-1622
liver primordium6.06e-1622
septum transversum6.06e-1622
liver bud6.06e-1622
digestive tract diverticulum5.89e-1523
sac5.89e-1523
exocrine gland8.07e-1525
exocrine system8.07e-1525
abdomen element1.64e-1049
abdominal segment element1.64e-1049
abdominal segment of trunk1.64e-1049
abdomen1.64e-1049
epithelial tube2.33e-1047
trunk mesenchyme1.92e-0945
subdivision of trunk2.76e-0966
trunk region element1.69e-0779
primordium3.82e-07134
mesenchyme5.06e-0761
entire embryonic mesenchyme5.06e-0761







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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