FFCP PHASE1:Mm9::chr14:37948275..37948284,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=66092|HGNC=|UniProt=Q91VC9|association_with_transcript=-23bp_to_ENSMUST00000042564_5end|description=CAGE_peak_7_at_Ghitm_5end|id=chr14:37948275..37948284,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000025!6.17e-08!114;UBERON:0004535!6.42e-08!23;UBERON:0001009!6.42e-08!23;UBERON:0004111!4.40e-07!122;UBERON:0000033!6.74e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.12e-09,92;UBERON:0004535,7.95e-09,23;UBERON:0001009,7.95e-09,23;UBERON:0000025,8.92e-08,114;UBERON:0000073,1.01e-07,54;UBERON:0001017,4.56e-07,73;UBERON:0007100,7.82e-07,18;UBERON:0000948,7.82e-07,18;UBERON:0005498,7.82e-07,18;UBERON:0004140,7.82e-07,18;UBERON:0009881,7.82e-07,18;UBERON:0004141,7.82e-07,18;UBERON:0003084,7.82e-07,18;UBERON:0007005,7.82e-07,18;UBERON:0004139,7.82e-07,18;UBERON:0004291,7.82e-07,18;UBERON:0001049,7.84e-07,52;UBERON:0005068,7.84e-07,52;UBERON:0006241,7.84e-07,52;UBERON:0007135,7.84e-07,52;UBERON:0001016,9.88e-07,75|phase1_expression=1.60148847104794,5.93258192986914,5.0049916332849,3.93203474698879,6.51164448930251,1.84667199103079,2.10251376535973,0.129123323441576,0.422366166455,0,0,0.0797721589953364,0.171200729931206,0.0874204024189974,0.666219523631325,0.607425802169478,0.699561878128147,0.157731082679119,0,0,2.46625541438102,0.893618560807968,0.261199789138935,2.23989391910769,4.35877634027623,5.16808767703518,3.4460959692726,3.44753972297422,3.99049180858385,5.04060259519861,4.43461021310609,0.635030673459631,1.84519436275371,0,1.1554064790051,0.831173226792462,0,0,0.7813353445238,0,0,0,0,4.65818226509636,4.05507724878058,2.56965453026354,1.56478268869608,2.8343270329458,5.4921545683618,8.74934545834275,9.23910382727393,5.75010257459886,0.335565212115473,0,0,2.31533492432352,1.43266719969378,3.09403255366465,1.01158230429799,0.528990979272033,0.633831403506179,2.37191172448392,5.33576877666684,0,0,0,3.29560121570245,2.30530983192933,0.207379224616955,0.135005938331691,0.420649922702764,2.85650984403804,1.76694832761291,0,0.191690942036473,0,8.8092704799511,8.55505165170758,2.76491759861238,0.791317726381163,0.914876436024097,0,3.35019598801657,6.19038871034848,5.04234217663473,2.65165726926301,2.27794689278565,0.931997229126503,1.13589289999776,0.906858721281426,1.73918693221007,0.860423876981386,1.3599426674155,0.539703191637817,0,0.448026887097336,0.983110940922263,1.1930122580464,1.81850203222008,1.7666978725517,0.985903938436763,0,0,0,1.5154372870785,1.52015919285059,0.505524445014783,1.48439043634778,0.258937883647172,0.890652834388949,0.867426633830679,0.304465478312141,1.38369298353635,0.301445281105245,3.99801604261396,2.13633205260448,1.48316980640624,3.18118585223806,0.884610551949874,1.29413479957927,1.10420759230197,2.42437626567611,7.45567044872489,9.66176630138106,7.74952815209784,1.53274233125155,1.1981512450592,2.39961092397363,1.14363204365758,3.59497534571574,3.66000482254901,0.753926112677186,3.12883776346098,4.60287823194595,6.2336413367868,5.51620294430376,1.42575109390443,1.99051152976149,0.505445516867349,2.94618598241064,1.82168620147785,2.75882525320168,0.360124259610698,0.60281927134286,1.42876648217788,1.40925092313335,0.655912071918102,2.32833033665114,1.07783996466421,0.189106080167819,0.351902248327898,0,0.556094498451196,0.348252166522167,0.61734640922383,0.796137067273973,0.702213187313235,2.31613116403244,0.852490498186778,1.03562886267751,2.34526059981096,1.08037236876609,1.42046841351126,2.55793501271625,2.62254091908543,2.79040733700489,2.95100741539581,3.26942958628075,3.78487654801005,3.94001913789829,7.94474333549386,4.9707995724613,2.41505126820156,5.90508242545636,1.89260953707715,1.13195073617213,2.31293148088659,2.3800550999719,0.213288250535234,0.464473343720877,0.38660238396628,0.605050573870028,0.667134131534611,1.33157938278791,1.42358718463353,1.4822905925161,1.25667604400135,1.1937388322469,1.9496408711912,0,1.29682829924817,1.99141273254367,0,0.571242563048644,0,0.203651327845314,0.193952487167626,1.96380295692892,0.69560190836683,1.62371162777562,1.56998727841375,2.22114895059241,1.48226313543574,0.83422552858047,0.589676985339609,0.674586337154561,0.202860121388503,0.72353147925725,0,0.575392274901621,4.53978634970099,0.274561413188081,1.43768206527355,1.86070473834252,1.24815069245824,0.757736633841335,0.896987067609561,4.3419916922703,0.923765950833023,0.37898282354097,0,0.509235257325564,0.234690248288502,0.335012514883631,0.238043640886014,2.34160377429359,0.630540576424764,2.6575762757853,1.2756381492599,0.81931657357869,1.72684981865896,1.59113964439663,0,0,0.983528546038072,1.37968373152366,4.97706828962155,6.91548950893999,1.14754461763673,4.03953483526997,0.315508219416257,0,0.646270193198397,0.477937595905104,0.445597348164788,0.566153061577665,0.404810701674894,1.16902343164525,1.58115111178609,3.53453448063988,0.425820255624806,0.534196811001766,1.14020871547503,0.164970122972535,0,0.2427806361549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| ||
|EntrezGene=66092 | |||
|HGNC= | |||
|UniProt=Q91VC9 | |||
|association_with_transcript=-23bp_to_ENSMUST00000042564_5end | |||
|description=CAGE_peak_7_at_Ghitm_5end | |||
|id=chr14:37948275..37948284,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!6.17e-08!114;UBERON:0004535!6.42e-08!23;UBERON:0001009!6.42e-08!23;UBERON:0004111!4.40e-07!122;UBERON:0000033!6.74e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.12e-09,92;UBERON:0004535,7.95e-09,23;UBERON:0001009,7.95e-09,23;UBERON:0000025,8.92e-08,114;UBERON:0000073,1.01e-07,54;UBERON:0001017,4.56e-07,73;UBERON:0007100,7.82e-07,18;UBERON:0000948,7.82e-07,18;UBERON:0005498,7.82e-07,18;UBERON:0004140,7.82e-07,18;UBERON:0009881,7.82e-07,18;UBERON:0004141,7.82e-07,18;UBERON:0003084,7.82e-07,18;UBERON:0007005,7.82e-07,18;UBERON:0004139,7.82e-07,18;UBERON:0004291,7.82e-07,18;UBERON:0001049,7.84e-07,52;UBERON:0005068,7.84e-07,52;UBERON:0006241,7.84e-07,52;UBERON:0007135,7.84e-07,52;UBERON:0001016,9.88e-07,75 | |||
|phase1_expression=1.60148847104794,5.93258192986914,5.0049916332849,3.93203474698879,6.51164448930251,1.84667199103079,2.10251376535973,0.129123323441576,0.422366166455,0,0,0.0797721589953364,0.171200729931206,0.0874204024189974,0.666219523631325,0.607425802169478,0.699561878128147,0.157731082679119,0,0,2.46625541438102,0.893618560807968,0.261199789138935,2.23989391910769,4.35877634027623,5.16808767703518,3.4460959692726,3.44753972297422,3.99049180858385,5.04060259519861,4.43461021310609,0.635030673459631,1.84519436275371,0,1.1554064790051,0.831173226792462,0,0,0.7813353445238,0,0,0,0,4.65818226509636,4.05507724878058,2.56965453026354,1.56478268869608,2.8343270329458,5.4921545683618,8.74934545834275,9.23910382727393,5.75010257459886,0.335565212115473,0,0,2.31533492432352,1.43266719969378,3.09403255366465,1.01158230429799,0.528990979272033,0.633831403506179,2.37191172448392,5.33576877666684,0,0,0,3.29560121570245,2.30530983192933,0.207379224616955,0.135005938331691,0.420649922702764,2.85650984403804,1.76694832761291,0,0.191690942036473,0,8.8092704799511,8.55505165170758,2.76491759861238,0.791317726381163,0.914876436024097,0,3.35019598801657,6.19038871034848,5.04234217663473,2.65165726926301,2.27794689278565,0.931997229126503,1.13589289999776,0.906858721281426,1.73918693221007,0.860423876981386,1.3599426674155,0.539703191637817,0,0.448026887097336,0.983110940922263,1.1930122580464,1.81850203222008,1.7666978725517,0.985903938436763,0,0,0,1.5154372870785,1.52015919285059,0.505524445014783,1.48439043634778,0.258937883647172,0.890652834388949,0.867426633830679,0.304465478312141,1.38369298353635,0.301445281105245,3.99801604261396,2.13633205260448,1.48316980640624,3.18118585223806,0.884610551949874,1.29413479957927,1.10420759230197,2.42437626567611,7.45567044872489,9.66176630138106,7.74952815209784,1.53274233125155,1.1981512450592,2.39961092397363,1.14363204365758,3.59497534571574,3.66000482254901,0.753926112677186,3.12883776346098,4.60287823194595,6.2336413367868,5.51620294430376,1.42575109390443,1.99051152976149,0.505445516867349,2.94618598241064,1.82168620147785,2.75882525320168,0.360124259610698,0.60281927134286,1.42876648217788,1.40925092313335,0.655912071918102,2.32833033665114,1.07783996466421,0.189106080167819,0.351902248327898,0,0.556094498451196,0.348252166522167,0.61734640922383,0.796137067273973,0.702213187313235,2.31613116403244,0.852490498186778,1.03562886267751,2.34526059981096,1.08037236876609,1.42046841351126,2.55793501271625,2.62254091908543,2.79040733700489,2.95100741539581,3.26942958628075,3.78487654801005,3.94001913789829,7.94474333549386,4.9707995724613,2.41505126820156,5.90508242545636,1.89260953707715,1.13195073617213,2.31293148088659,2.3800550999719,0.213288250535234,0.464473343720877,0.38660238396628,0.605050573870028,0.667134131534611,1.33157938278791,1.42358718463353,1.4822905925161,1.25667604400135,1.1937388322469,1.9496408711912,0,1.29682829924817,1.99141273254367,0,0.571242563048644,0,0.203651327845314,0.193952487167626,1.96380295692892,0.69560190836683,1.62371162777562,1.56998727841375,2.22114895059241,1.48226313543574,0.83422552858047,0.589676985339609,0.674586337154561,0.202860121388503,0.72353147925725,0,0.575392274901621,4.53978634970099,0.274561413188081,1.43768206527355,1.86070473834252,1.24815069245824,0.757736633841335,0.896987067609561,4.3419916922703,0.923765950833023,0.37898282354097,0,0.509235257325564,0.234690248288502,0.335012514883631,0.238043640886014,2.34160377429359,0.630540576424764,2.6575762757853,1.2756381492599,0.81931657357869,1.72684981865896,1.59113964439663,0,0,0.983528546038072,1.37968373152366,4.97706828962155,6.91548950893999,1.14754461763673,4.03953483526997,0.315508219416257,0,0.646270193198397,0.477937595905104,0.445597348164788,0.566153061577665,0.404810701674894,1.16902343164525,1.58115111178609,3.53453448063988,0.425820255624806,0.534196811001766,1.14020871547503,0.164970122972535,0,0.242780636154981,0.906970670894253,0.377210159511796,0.295301892880773,0.922305443831782,1.55056975900933,0.363533729477506,0.712994756769443,0,0,0,0.340439605753788,1.08036656418786,0.517434735131018,1.50035924522115,1.24138163549592,0.713475270408282,1.64549020602121,1.2178597964584,0.23467170806371,2.96564899209348,0.661585194164886,0.32977250588296,1.93757312035087,0.542816324353403,0.477489376012546,0.656563598980245,1.1659233465194,5.37733375830478,0.341741761595705,0.206386867963223,0,0.565105371014073,0.136694227721025,0.457556346413045,0.679913719975421,2.6590775941495,1.24379976423981,0,0.316335993581135,0.813277868507395,0.432021363287205,0.209088296014469,0.436725127492355,0.674321731924103,1.23980183588004,1.83229159388821,2.33306951925227,1.86401793926078,5.6369293868419,0.448549638131936,0.827292452285488,0.972255941720238,0.645799117388655,0.168956125490778,1.29092962510329,0.911430693907651,0.314578033277133,0.724752362478018,3.16833006883652,0.632022241256357,0.202725215290164,0.308132871494482,0.129920822977795,0,0,0.240390899039938,0,0.2019328998962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| |||
|short_description=p7@Ghitm | |||
}} |
Revision as of 02:05, 13 September 2013
Short description: | p7@Ghitm |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Ghitm_5end |
Coexpression cluster: | NA |
Association with transcript: | -23bp_to_ENSMUST00000042564_5end |
EntrezGene: | Ghitm |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 1.12e-09 | 92 |
cardiovascular system | 7.95e-09 | 23 |
circulatory system | 7.95e-09 | 23 |
tube | 8.92e-08 | 114 |
regional part of nervous system | 1.01e-07 | 54 |
central nervous system | 4.56e-07 | 73 |
primary circulatory organ | 7.82e-07 | 18 |
heart | 7.82e-07 | 18 |
primitive heart tube | 7.82e-07 | 18 |
primary heart field | 7.82e-07 | 18 |
anterior lateral plate mesoderm | 7.82e-07 | 18 |
heart tube | 7.82e-07 | 18 |
heart primordium | 7.82e-07 | 18 |
cardiac mesoderm | 7.82e-07 | 18 |
cardiogenic plate | 7.82e-07 | 18 |
heart rudiment | 7.82e-07 | 18 |
neural tube | 7.84e-07 | 52 |
neural rod | 7.84e-07 | 52 |
future spinal cord | 7.84e-07 | 52 |
neural keel | 7.84e-07 | 52 |
nervous system | 9.88e-07 | 75 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.