FFCP PHASE1:Hg19::chr4:23886471..23886501,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10891|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9237|TSSclassifier=S|UniProt=|association_with_transcript=52bp_to_ENST00000503714_5end|description=CAGE_peak_5_at_PPARGC1A_5end|id=chr4:23886471..23886501,-|ontology_enrichment_celltype=CL:0002586!1.90e-08!3|ontology_enrichment_celltype_v019=CL:0002586;1.22e-40;3!CL:0000149;1.10e-30;4!CL:0000138;1.01e-09;6!CL:0000147;3.21e-09;14!CL:0000153;9.10e-07;9!CL:0000447;9.10e-07;9|ontology_enrichment_celltype_v019_2=CL:0002586,1.49e-40,3;CL:0000149,1.28e-30,4;CL:0000058,1.15e-09,6;CL:0000138,1.15e-09,6;CL:0000147,3.35e-09,14;CL:0000153,9.93e-07,9;CL:0000447,9.93e-07,9|ontology_enrichment_development_v019=UBERON:0003918;1.04e-12;10!UBERON:0007687;1.04e-12;10!UBERON:0003104;2.46e-10;31|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:5662;1.72e-14;1|ontology_enrichment_disease_v019_2=DOID:5662,2.41e-14,1|ontology_enrichment_uberon=UBERON:0000033!2.13e-10!123;UBERON:0000153!2.38e-10!129;UBERON:0007811!2.38e-10!129;UBERON:0001781!1.90e-08!3;UBERON:0001782!1.90e-08!3;UBERON:0005424!1.90e-08!3;UBERON:0007023!3.54e-08!115;UBERON:0000966!7.20e-08!5;UBERON:0005388!7.20e-08!5;UBERON:0001802!7.20e-08!5;UBERON:0001896!1.75e-07!3;UBERON:0005290!1.75e-07!3;UBERON:0010096!1.75e-07!3;UBERON:0005743!2.06e-07!86;UBERON:0004121!3.49e-07!169;UBERON:0000166!6.00e-07!21;UBERON:0000924!7.85e-07!173;UBERON:0006601!7.85e-07!173|ontology_enrichment_uberon_v019=UBERON:0001781;1.22e-40;3!UBERON:0001782;1.22e-40;3!UBERON:0005090;3.57e-27;2!UBERON:0001630;3.57e-27;2!UBERON:0000966;1.06e-24;5!UBERON:0005388;1.06e-24;5!UBERON:0001802;1.06e-24;5!UBERON:0001389;1.72e-14;1!UBERON:0000026;1.72e-14;1!UBERON:0008784;1.72e-14;1!UBERON:0006058;1.72e-14;1!UBERON:0002426;1.72e-14;1!UBERON:0003831;1.72e-14;1!UBERON:0003898;1.72e-14;1!UBERON:0004830;1.72e-14;1!UBERON:0003663;1.72e-14;1!UBERON:0004256;1.72e-14;1!UBERON:0004708;1.72e-14;1!UBERON:0002101;1.72e-14;1!UBERON:0004709;1.72e-14;1!UBERON:0003830;1.72e-14;1!UBERON:0005175;1.72e-14;1!UBERON:0002529;1.72e-14;1!UBERON:0010538;1.72e-14;1!UBERON:0003661;1.72e-14;1!UBERON:0010890;1.72e-14;1!UBERON:0002471;1.72e-14;1!UBERON:0001774;1.72e-14;1!UBERON:0001383;1.72e-14;1!UBERON:0010758;1.72e-14;1!UBERON:0010707;1.72e-14;1!UBERON:0001103;1.72e-14;1!UBERON:0000978;1.72e-14;1!UBERON:0002103;1.72e-14;1!UBERON:0001665;1.72e-14;1!UBERON:0003823;1.72e-14;1!UBERON:0000154;1.72e-14;1!UBERON:0010709;1.72e-14;1!UBERON:0007625;1.39e-11;11!UBERON:0000019;6.30e-07;19!UBERON:0000047;6.30e-07;19!UBERON:0004088;6.30e-07;19!UBERON:0010230;6.30e-07;19|ontology_enrichment_uberon_v019_2=UBERON:0001782,1.49e-40,3;UBERON:0005424,1.49e-40,3;UBERON:0001781,1.28e-30,4;UBERON:0005090,1.40e-27,2;UBERON:0001630,1.40e-27,2;UBERON:0000966,1.16e-20,6;UBERON:0005388,1.16e-20,6;UBERON:0001802,1.16e-20,6;UBERON:0005418,9.36e-15,1;UBERON:0001389,9.36e-15,1;UBERON:0000026,9.36e-15,1;UBERON:0008784,9.36e-15,1;UBERON:0006058,9.36e-15,1;UBERON:0003663,9.36e-15,1;UBERON:0004256,9.36e-15,1;UBERON:0004708,9.36e-15,1;UBERON:0002101,9.36e-15,1;UBERON:0004709,9.36e-15,1;UBERON:0002529,9.36e-15,1;UBERON:0010538,9.36e-15,1;UBERON:0003661,9.36e-15,1;UBERON:0010890,9.36e-15,1;UBERON:0002471,9.36e-15,1;UBERON:0001383,9.36e-15,1;UBERON:0004357,9.36e-15,1;UBERON:0004347,9.36e-15,1;UBERON:0005420,9.36e-15,1;UBERON:0005732,9.36e-15,1;UBERON:0010758,9.36e-15,1;UBERON:0010707,9.36e-15,1;UBERON:0000978,9.36e-15,1;UBERON:0002103,9.36e-15,1;UBERON:0001665,9.36e-15,1;UBERON:0003823,9.36e-15,1;UBERON:0000154,9.36e-15,1;UBERON:0010709,9.36e-15,1;UBERON:0005733,9.36e-15,1;UBERON:0005730,9.36e-15,1;UBERON:0002426,1.23e-14,1;UBERON:0003831,1.23e-14,1;UBERON:0003898,1.23e-14,1;UBERON:0004830,1.23e-14,1;UBERON:0003830,1.23e-14,1;UBERON:0005175,1.23e-14,1;UBERON:0001774,1.23e-14,1;UBERON:0001103,1.23e-14,1;UBERON:0010084,1.23e-14,1;UBERON:0007625,1.47e-11,11|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0.872338524100369,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0.492484232307152,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,1.44846518960824,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0.302714855289863,0.576175924479999,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0.211931901159562,0,0,0,0,0,0,0,0.184099797284599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0.658501712451753,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.981531933753119,0,0,0.207970861530807,0,0.315404830067869,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10891 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9237 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=52bp_to_ENST00000503714_5end | |||
|description=CAGE_peak_5_at_PPARGC1A_5end | |||
|id=chr4:23886471..23886501,- | |||
|ontology_enrichment_celltype=CL:0002586!1.90e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002586;1.22e-40;3!CL:0000149;1.10e-30;4!CL:0000138;1.01e-09;6!CL:0000147;3.21e-09;14!CL:0000153;9.10e-07;9!CL:0000447;9.10e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,1.49e-40,3;CL:0000149,1.28e-30,4;CL:0000058,1.15e-09,6;CL:0000138,1.15e-09,6;CL:0000147,3.35e-09,14;CL:0000153,9.93e-07,9;CL:0000447,9.93e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0003918;1.04e-12;10!UBERON:0007687;1.04e-12;10!UBERON:0003104;2.46e-10;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5662;1.72e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,2.41e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0000033!2.13e-10!123;UBERON:0000153!2.38e-10!129;UBERON:0007811!2.38e-10!129;UBERON:0001781!1.90e-08!3;UBERON:0001782!1.90e-08!3;UBERON:0005424!1.90e-08!3;UBERON:0007023!3.54e-08!115;UBERON:0000966!7.20e-08!5;UBERON:0005388!7.20e-08!5;UBERON:0001802!7.20e-08!5;UBERON:0001896!1.75e-07!3;UBERON:0005290!1.75e-07!3;UBERON:0010096!1.75e-07!3;UBERON:0005743!2.06e-07!86;UBERON:0004121!3.49e-07!169;UBERON:0000166!6.00e-07!21;UBERON:0000924!7.85e-07!173;UBERON:0006601!7.85e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0001781;1.22e-40;3!UBERON:0001782;1.22e-40;3!UBERON:0005090;3.57e-27;2!UBERON:0001630;3.57e-27;2!UBERON:0000966;1.06e-24;5!UBERON:0005388;1.06e-24;5!UBERON:0001802;1.06e-24;5!UBERON:0001389;1.72e-14;1!UBERON:0000026;1.72e-14;1!UBERON:0008784;1.72e-14;1!UBERON:0006058;1.72e-14;1!UBERON:0002426;1.72e-14;1!UBERON:0003831;1.72e-14;1!UBERON:0003898;1.72e-14;1!UBERON:0004830;1.72e-14;1!UBERON:0003663;1.72e-14;1!UBERON:0004256;1.72e-14;1!UBERON:0004708;1.72e-14;1!UBERON:0002101;1.72e-14;1!UBERON:0004709;1.72e-14;1!UBERON:0003830;1.72e-14;1!UBERON:0005175;1.72e-14;1!UBERON:0002529;1.72e-14;1!UBERON:0010538;1.72e-14;1!UBERON:0003661;1.72e-14;1!UBERON:0010890;1.72e-14;1!UBERON:0002471;1.72e-14;1!UBERON:0001774;1.72e-14;1!UBERON:0001383;1.72e-14;1!UBERON:0010758;1.72e-14;1!UBERON:0010707;1.72e-14;1!UBERON:0001103;1.72e-14;1!UBERON:0000978;1.72e-14;1!UBERON:0002103;1.72e-14;1!UBERON:0001665;1.72e-14;1!UBERON:0003823;1.72e-14;1!UBERON:0000154;1.72e-14;1!UBERON:0010709;1.72e-14;1!UBERON:0007625;1.39e-11;11!UBERON:0000019;6.30e-07;19!UBERON:0000047;6.30e-07;19!UBERON:0004088;6.30e-07;19!UBERON:0010230;6.30e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,1.49e-40,3;UBERON:0005424,1.49e-40,3;UBERON:0001781,1.28e-30,4;UBERON:0005090,1.40e-27,2;UBERON:0001630,1.40e-27,2;UBERON:0000966,1.16e-20,6;UBERON:0005388,1.16e-20,6;UBERON:0001802,1.16e-20,6;UBERON:0005418,9.36e-15,1;UBERON:0001389,9.36e-15,1;UBERON:0000026,9.36e-15,1;UBERON:0008784,9.36e-15,1;UBERON:0006058,9.36e-15,1;UBERON:0003663,9.36e-15,1;UBERON:0004256,9.36e-15,1;UBERON:0004708,9.36e-15,1;UBERON:0002101,9.36e-15,1;UBERON:0004709,9.36e-15,1;UBERON:0002529,9.36e-15,1;UBERON:0010538,9.36e-15,1;UBERON:0003661,9.36e-15,1;UBERON:0010890,9.36e-15,1;UBERON:0002471,9.36e-15,1;UBERON:0001383,9.36e-15,1;UBERON:0004357,9.36e-15,1;UBERON:0004347,9.36e-15,1;UBERON:0005420,9.36e-15,1;UBERON:0005732,9.36e-15,1;UBERON:0010758,9.36e-15,1;UBERON:0010707,9.36e-15,1;UBERON:0000978,9.36e-15,1;UBERON:0002103,9.36e-15,1;UBERON:0001665,9.36e-15,1;UBERON:0003823,9.36e-15,1;UBERON:0000154,9.36e-15,1;UBERON:0010709,9.36e-15,1;UBERON:0005733,9.36e-15,1;UBERON:0005730,9.36e-15,1;UBERON:0002426,1.23e-14,1;UBERON:0003831,1.23e-14,1;UBERON:0003898,1.23e-14,1;UBERON:0004830,1.23e-14,1;UBERON:0003830,1.23e-14,1;UBERON:0005175,1.23e-14,1;UBERON:0001774,1.23e-14,1;UBERON:0001103,1.23e-14,1;UBERON:0010084,1.23e-14,1;UBERON:0007625,1.47e-11,11 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0.872338524100369,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0.492484232307152,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,1.44846518960824,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0.302714855289863,0.576175924479999,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0.211931901159562,0,0,0,0,0,0,0,0.184099797284599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0.658501712451753,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.981531933753119,0,0,0.207970861530807,0,0.315404830067869,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05160100093111,1.31205858279882,3.25378394664303,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88743956579008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,1.26675244876796,0,0,0,0,0,0,0,0.895105873378046,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683652335082007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,1.60515529459758,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0.837847203816763,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.61967941313265,1.10154635083496,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0.244052529803926,0,0.573409195690071,0.665574309221114,0.18628920882415,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33113974164331,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0.235939446695481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0,1.20041606606193,0,0,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0.3414369541879,1.38251932362818,0.860454717640555,0,0,0,0,0.31020638566432,0,0,0.294450700845729,0,1.94228651156368,0.205325613712494,0,0,0,0,0,0,0,0,0.0771741581079447,0,0.470317296361523,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0.917458566809082,0,0.157771562193185,0.0679914901909147,0,0.5290268405154,0,0.462175628631418,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0.0636471582781649,0.202117188958219,0.435433495793923,0.342233301085281,0.0673520530145875,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@PPARGC1A | |||
}} |
Revision as of 10:32, 13 September 2013
Short description: | p5@PPARGC1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_PPARGC1A_5end |
Coexpression cluster: | NA |
Association with transcript: | 52bp_to_ENST00000503714_5end |
EntrezGene: | PPARGC1A |
HGNC: | 9237 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 1.49e-40 | 3 |
visual pigment cell | 1.28e-30 | 4 |
chondroblast | 1.15e-09 | 6 |
chondrocyte | 1.15e-09 | 6 |
pigment cell | 3.35e-09 | 14 |
GAG secreting cell | 9.93e-07 | 9 |
carbohydrate secreting cell | 9.93e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 2.41e-14 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.