FFCP PHASE1:Mm9::chr18:35931025..35931141,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=56550|HGNC=|MCL_coexpression_id=0|UniProt=P62838,Q3UT95,Q9D7F5|association_with_transcript=-71bp_to_ENSMUST00000170693,NM_019912,uc012bbj.1_5end|description=CAGE_peak_1_at_Ube2d2_5end|id=chr18:35931025..35931141,+|ontology_enrichment_celltype=CL:0000117!1.25e-14!23;CL:0000337!1.25e-14!23;CL:0000221!1.90e-12!44;CL:0000133!1.90e-12!44;CL:0002319!3.72e-12!43;CL:0000540!7.26e-12!33;CL:0000047!7.26e-12!33;CL:0000031!7.26e-12!33;CL:0000404!7.26e-12!33;CL:0000055!9.96e-08!50;CL:0000393!1.61e-07!39;CL:0000211!1.61e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.25e-14,23;CL:0000337,1.25e-14,23;CL:0000221,1.90e-12,44;CL:0000133,1.90e-12,44;CL:0002319,3.72e-12,43;CL:0000540,7.26e-12,33;CL:0000047,7.26e-12,33;CL:0000031,7.26e-12,33;CL:0000404,7.26e-12,33;CL:0000393,1.61e-07,39;CL:0000211,1.61e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.10e-22!73;UBERON:0005743!1.10e-22!73;UBERON:0000073!2.65e-22!75;UBERON:0001016!2.65e-22!75;UBERON:0004121!5.09e-22!102;UBERON:0000924!5.09e-22!102;UBERON:0006601!5.09e-22!102;UBERON:0000033!2.97e-21!63;UBERON:0002346!5.28e-21!71;UBERON:0003075!5.28e-21!71;UBERON:0007284!5.28e-21!71;UBERON:0001049!4.61e-19!52;UBERON:0005068!4.61e-19!52;UBERON:0006241!4.61e-19!52;UBERON:0007135!4.61e-19!52;UBERON:0000955!8.87e-18!50;UBERON:0006238!8.87e-18!50;UBERON:0002616!2.17e-17!49;UBERON:0003056!3.17e-17!49;UBERON:0000153!3.17e-16!94;UBERON:0007811!1.01e-14!86;UBERON:0003080!7.20e-14!40;UBERON:0002780!2.76e-13!39;UBERON:0001890!2.76e-13!39;UBERON:0006240!2.76e-13!39;UBERON:0002020!2.08e-12!34;UBERON:0002791!6.98e-10!29;UBERON:0003528!6.98e-10!29;UBERON:0001893!6.98e-10!29|ontology_enrichment_uberon_v019_2=UBERON:0004121,8.65e-23,95;UBERON:0000924,8.65e-23,95;UBERON:0006601,8.65e-23,95;UBERON:0001017,1.10e-22,73;UBERON:0002346,2.07e-22,64;UBERON:0003075,2.07e-22,64;UBERON:0007284,2.07e-22,64;UBERON:0001016,2.65e-22,75;UBERON:0000073,3.55e-20,54;UBERON:0010371,4.37e-20,73;UBERON:0001049,4.61e-19,52;UBERON:0005068,4.61e-19,52;UBERON:0006241,4.61e-19,52;UBERON:0007135,4.61e-19,52;UBERON:0003056,3.17e-17,49;UBERON:0010314,5.69e-17,92;UBERON:0000955,4.57e-16,47;UBERON:0006238,4.57e-16,47;UBERON:0002616,1.10e-15,46;UBERON:0003080,7.20e-14,40;UBERON:0002780,2.76e-13,39;UBERON:0001890,2.76e-13,39;UBERON:0006240,2.76e-13,39;UBERON:0002020,2.08e-12,34;UBERON:0003528,6.98e-10,29;UBERON:0002791,6.98e-10,29;UBERON:0001893,6.98e-10,29|phase1_expression=13.6126520039075,2.09385244583617,2.72999543633722,3.32710632437513,3.00537437967808,2.51818907867835,1.40167584357315,6.84353614240354,11.6854639385883,8.42632294759177,4.10923123741212,2.55270908785077,8.56003649656029,6.29426897416781,3.66420737997229,4.04950534779652,3.49780939064073,7.5710919685977,7.81552271552711,7.21462408056651,42.3515584952328,5.06383851124515,2.61199789138935,1.43993180514066,2.98232065387321,1.14846392823004,1.29228598847722,3.23206849028834,1.90023419456374,1.76421090831952,2.88249663851896,2.54012269383853,3.69038872550742,0,2.02196133825892,2.1610503896604,2.6542016314108,11.7188856606334,7.0320181007142,8.89990364755457,8.2352408324342,14.3439551841274,7.2826552954673,3.02152363141385,4.66333883609767,3.30384153891027,17.2126095756569,11.1192829754028,10.3252505885202,8.1660557611199,11.0589273084036,17.2503077237966,9.73139115134871,10.1550699881588,10.7550015725588,6.94600477297057,5.44413535883638,3.6097046459421,48.7582670671631,39.1453324661304,44.3681982454325,6.43804610931351,9.78224275722253,11.2487464660175,6.92206453796882,9.2362414942993,12.583204641773,10.7581125490035,33.3880551633298,30.106324247967,26.2906201689228,18.852964970651,20.0990372265968,29.5202826108039,26.357504530015,23.8996884518605,20.9220173898839,24.3882815742709,24.2698322544865,45.8964281301075,39.522662036241,35.4221091978597,22.6138229191119,19.6966913511088,21.0861581931998,20.3293723976831,20.9286370774681,36.7206908275842,9.69295274664756,8.91744409260069,4.63783181922684,4.30211938490693,4.0798280022465,2.15881276655127,2.59910566979068,4.48026887097336,7.44355426698285,6.30592193538814,7.53379413348319,7.42013106471715,13.8026551381147,3.84979432242953,2.54805239706646,0,2.59789249213457,2.02687892380079,2.02209778005913,7.65031994117702,8.2860122767095,10.984718290797,10.235634279202,6.08930956624282,6.6878494204257,8.44046787094686,10.4653949350777,12.0639927676488,6.17987419335935,8.09756398751505,5.30766331169925,13.2648816956876,11.2629174414801,7.27312879702833,3.72783522436244,11.4184510834503,11.3101221679266,3.32094171771169,8.02761334189666,7.19883277192089,9.14905634926066,26.9623150928681,16.0125210986519,27.5183031127173,16.5133104182663,10.4843337505436,22.648896856992,17.3598151482501,17.0071737630028,7.0911973247753,5.05445516867349,11.3638602178696,10.9301172088671,19.0818746679783,21.0672691872259,19.8930359543144,20.751132241155,19.2170580427275,19.9584673312222,12.4177617954728,19.6166873568886,18.7215019366141,14.4279921814438,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| ||
|EntrezGene=56550 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=P62838,Q3UT95,Q9D7F5 | |||
|association_with_transcript=-71bp_to_ENSMUST00000170693,NM_019912,uc012bbj.1_5end | |||
|description=CAGE_peak_1_at_Ube2d2_5end | |||
|id=chr18:35931025..35931141,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.25e-14!23;CL:0000337!1.25e-14!23;CL:0000221!1.90e-12!44;CL:0000133!1.90e-12!44;CL:0002319!3.72e-12!43;CL:0000540!7.26e-12!33;CL:0000047!7.26e-12!33;CL:0000031!7.26e-12!33;CL:0000404!7.26e-12!33;CL:0000055!9.96e-08!50;CL:0000393!1.61e-07!39;CL:0000211!1.61e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.25e-14,23;CL:0000337,1.25e-14,23;CL:0000221,1.90e-12,44;CL:0000133,1.90e-12,44;CL:0002319,3.72e-12,43;CL:0000540,7.26e-12,33;CL:0000047,7.26e-12,33;CL:0000031,7.26e-12,33;CL:0000404,7.26e-12,33;CL:0000393,1.61e-07,39;CL:0000211,1.61e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.10e-22!73;UBERON:0005743!1.10e-22!73;UBERON:0000073!2.65e-22!75;UBERON:0001016!2.65e-22!75;UBERON:0004121!5.09e-22!102;UBERON:0000924!5.09e-22!102;UBERON:0006601!5.09e-22!102;UBERON:0000033!2.97e-21!63;UBERON:0002346!5.28e-21!71;UBERON:0003075!5.28e-21!71;UBERON:0007284!5.28e-21!71;UBERON:0001049!4.61e-19!52;UBERON:0005068!4.61e-19!52;UBERON:0006241!4.61e-19!52;UBERON:0007135!4.61e-19!52;UBERON:0000955!8.87e-18!50;UBERON:0006238!8.87e-18!50;UBERON:0002616!2.17e-17!49;UBERON:0003056!3.17e-17!49;UBERON:0000153!3.17e-16!94;UBERON:0007811!1.01e-14!86;UBERON:0003080!7.20e-14!40;UBERON:0002780!2.76e-13!39;UBERON:0001890!2.76e-13!39;UBERON:0006240!2.76e-13!39;UBERON:0002020!2.08e-12!34;UBERON:0002791!6.98e-10!29;UBERON:0003528!6.98e-10!29;UBERON:0001893!6.98e-10!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,8.65e-23,95;UBERON:0000924,8.65e-23,95;UBERON:0006601,8.65e-23,95;UBERON:0001017,1.10e-22,73;UBERON:0002346,2.07e-22,64;UBERON:0003075,2.07e-22,64;UBERON:0007284,2.07e-22,64;UBERON:0001016,2.65e-22,75;UBERON:0000073,3.55e-20,54;UBERON:0010371,4.37e-20,73;UBERON:0001049,4.61e-19,52;UBERON:0005068,4.61e-19,52;UBERON:0006241,4.61e-19,52;UBERON:0007135,4.61e-19,52;UBERON:0003056,3.17e-17,49;UBERON:0010314,5.69e-17,92;UBERON:0000955,4.57e-16,47;UBERON:0006238,4.57e-16,47;UBERON:0002616,1.10e-15,46;UBERON:0003080,7.20e-14,40;UBERON:0002780,2.76e-13,39;UBERON:0001890,2.76e-13,39;UBERON:0006240,2.76e-13,39;UBERON:0002020,2.08e-12,34;UBERON:0003528,6.98e-10,29;UBERON:0002791,6.98e-10,29;UBERON:0001893,6.98e-10,29 | |||
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| |||
|short_description=p1@Ube2d2 | |||
}} |
Revision as of 16:01, 13 September 2013
Short description: | p1@Ube2d2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ube2d2_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -71bp_to_ENSMUST00000170693, NM_019912, uc012bbj.1_5end |
EntrezGene: | Ube2d2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.