FFCP PHASE1:Mm9::chr19:44277703..44277719,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=30049|HGNC=|MCL_coexpression_id=28|UniProt=Q8BNZ5|association_with_transcript=-39bp_to_ENSMUST00000165653_5end|description=CAGE_peak_2_at_Scd3_5end|id=chr19:44277703..44277719,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000014!6.84e-17!5;UBERON:0001003!6.84e-17!5;UBERON:0002097!6.84e-17!5;UBERON:0002199!6.84e-17!5;UBERON:0007029!6.84e-17!5;UBERON:0007376!6.84e-17!5;UBERON:0002416!6.84e-17!5;UBERON:0007383!6.84e-17!5|ontology_enrichment_uberon_v019_2=UBERON:0000014,6.57e-35,5;UBERON:0001003,6.57e-35,5;UBERON:0002097,6.57e-35,5;UBERON:0002199,6.57e-35,5;UBERON:0007029,6.57e-35,5;UBERON:0007376,6.57e-35,5;UBERON:0002416,6.57e-35,5;UBERON:0007383,6.57e-35,5;UBERON:0005085,2.06e-08,13;UBERON:0003102,2.61e-08,22;UBERON:0010371,2.40e-07,73;UBERON:0001911,8.63e-07,2;UBERON:0000076,8.63e-07,2;UBERON:0005333,8.63e-07,2;UBERON:0008425,8.63e-07,2;UBERON:0005311,8.63e-07,2|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,3.37066608316204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0,0.124406970610093,0,937.939351686014,0,0,0,0,0,0,0,156.515539297104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.277635371514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,17.4779428117969,0.322928853391811,2.17126529741361,5.49112782414428,9.19189038572343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.412070114477788,0,0,0,0,0,0,0.17230640686684,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0,0,0.263069711437843,0,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0,0.467863216890817,0.644613162144895,0,0.220591419119515,0|short_description=p2@Scd3}} | ||
|EntrezGene=30049 | |||
|HGNC= | |||
|MCL_coexpression_id=28 | |||
|UniProt=Q8BNZ5 | |||
|association_with_transcript=-39bp_to_ENSMUST00000165653_5end | |||
|description=CAGE_peak_2_at_Scd3_5end | |||
|id=chr19:44277703..44277719,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000014!6.84e-17!5;UBERON:0001003!6.84e-17!5;UBERON:0002097!6.84e-17!5;UBERON:0002199!6.84e-17!5;UBERON:0007029!6.84e-17!5;UBERON:0007376!6.84e-17!5;UBERON:0002416!6.84e-17!5;UBERON:0007383!6.84e-17!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,6.57e-35,5;UBERON:0001003,6.57e-35,5;UBERON:0002097,6.57e-35,5;UBERON:0002199,6.57e-35,5;UBERON:0007029,6.57e-35,5;UBERON:0007376,6.57e-35,5;UBERON:0002416,6.57e-35,5;UBERON:0007383,6.57e-35,5;UBERON:0005085,2.06e-08,13;UBERON:0003102,2.61e-08,22;UBERON:0010371,2.40e-07,73;UBERON:0001911,8.63e-07,2;UBERON:0000076,8.63e-07,2;UBERON:0005333,8.63e-07,2;UBERON:0008425,8.63e-07,2;UBERON:0005311,8.63e-07,2 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,3.37066608316204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0,0.124406970610093,0,937.939351686014,0,0,0,0,0,0,0,156.515539297104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.277635371514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,17.4779428117969,0.322928853391811,2.17126529741361,5.49112782414428,9.19189038572343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.412070114477788,0,0,0,0,0,0,0.17230640686684,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0,0,0.263069711437843,0,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0,0.467863216890817,0.644613162144895,0,0.220591419119515,0 | |||
|short_description=p2@Scd3 | |||
}} |
Revision as of 17:43, 13 September 2013
Short description: | p2@Scd3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Scd3_5end |
Coexpression cluster: | MCL_coexpression_mm9:28 |
Association with transcript: | -39bp_to_ENSMUST00000165653_5end |
EntrezGene: | Scd3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
zone of skin | 6.57e-35 | 5 |
skin epidermis | 6.57e-35 | 5 |
skin of body | 6.57e-35 | 5 |
integument | 6.57e-35 | 5 |
surface | 6.57e-35 | 5 |
outer epithelium | 6.57e-35 | 5 |
integumental system | 6.57e-35 | 5 |
enveloping layer of ectoderm | 6.57e-35 | 5 |
ectodermal placode | 2.06e-08 | 13 |
surface structure | 2.61e-08 | 22 |
ecto-epithelium | 2.40e-07 | 73 |
mammary gland | 8.63e-07 | 2 |
external ectoderm | 8.63e-07 | 2 |
mammary bud | 8.63e-07 | 2 |
mammary ridge | 8.63e-07 | 2 |
mammary placode | 8.63e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.