FFCP PHASE1:Hg19::chr6:27782962..27782988,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8342|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4750|TSSclassifier=S|UniProt=Q99879|association_with_transcript=140bp_to_BC066244,BC067485,BC067486,BC067487,BC067488,BC067489_5end|description=CAGE_peak_4_at_HIST1H2BM_5end|id=chr6:27782962..27782988,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002577;3.23e-09;3!CL:0000764;3.94e-07;2!CL:0000558;3.94e-07;2|ontology_enrichment_celltype_v019_2=CL:0002577,2.26e-09,3;CL:0000817,5.42e-09,3;CL:0000764,3.53e-07,2;CL:0000765,3.53e-07,2;CL:0000050,3.53e-07,2;CL:0000038,3.53e-07,2;CL:0000558,3.53e-07,2;CL:0000547,3.53e-07,2;CL:0000549,3.53e-07,2;CL:0000550,3.53e-07,2;CL:0000552,3.53e-07,2|ontology_enrichment_development_v019=CL:0000954;9.60e-07;2|ontology_enrichment_disease=DOID:2531!1.58e-11!51;DOID:0060083!1.58e-11!51;DOID:1240!1.30e-08!39;DOID:0060058!4.51e-07!10|ontology_enrichment_disease_v019=DOID:74;7.51e-07;2|ontology_enrichment_disease_v019_2=DOID:2531,1.36e-10,51;DOID:0060083,1.36e-10,51;DOID:1240,6.73e-08,39|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001987;5.31e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0001987,4.08e-07,4;UBERON:0004340,4.08e-07,4|phase1_expression=0,0,0,0,0,0,2.53299878168311,0,0,0.737201809504527,5.58240934377942,0,0.527533956456907,0,0,0,0,0.730310090387373,0,0.246242116153576,0.408001382488506,0.626909442956176,0,0.547497700291537,0.753255837568817,1.60468152070698,1.23150884174919,1.25937250101887,0,0,0,0.919421224478927,1.50602959389125,0,0.92960640696362,0.568676929949686,1.17440175733939,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0.661044872784862,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0.557052284425868,0.294605907474837,0.664601683750863,0.270803863765016,1.15282187753108,0.520237390239513,0.986627427622057,0,1.15921234294021,0,0,0,0.453237370790265,0.383220493601921,0.34362744548263,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0,0.361439152384566,0,0,0,0,0.283604451492204,0,0.351339142772504,0.130979075497713,0.364295288292542,0,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0,0,1.37559020970034,0.417989933073621,0.258416759169329,0,0,0,0,0.24406205754817,1.10298924103761,0,0.535798369704479,0.673588117878509,0.225222960966644,1.53316637465883,0,0.549605231791222,0,0,0,0,0.379891534993739,0,0,1.06400514659507,0,1.06748995729705,0.24666754841716,0,0,0.326923806226917,0,0,0.234321431833797,0.312160076830321,0.570471821544449,0,1.52664848236894,0.971237666208789,0.561803226808994,0.408308342509787,0.122834317311768,0,0,0.247266929278557,0,0,0.336672227908132,0.500474079487857,0.277064115484183,0,0,0.45071417671979,0.340296549480063,0,0,0,0.300091096084402,0.206105058476878,0,0,0,0,0.252433774244115,0,0,0,0.10075209822764,0.339121184620975,0,0.272746120590835,0,0.731842236777572,0.132529768321485,0.116193942869518,0.207322110030741,0.756962552626885,2.91981887260664,0,0,4.14404764057442,0,0,0.118306800039844,0,0,0,0,0,0,0,0.38474715694639,1.4763109092493,1.40241773803446,0,0,0,0,0,1.7658523976586,0,0.171567810298526,0,0,0.301586917234893,0,0,2.07986957055916,0,0.115930404975077,0.117408694235822,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0,0.594524649154913,0.93733833986777,0,0,0.447792613514241,0,0.383382679165211,0,0.704387472105808,0,0.144119953416961,0,0.190493682876507,0.763976851116555,0,1.71072446022705,0.514137463516618,0.300343057843917,0,0,0.87192013766656,0.4400297149257,0,0,0,0,0,0.257207374262142,0,0.532844358032199,0,0,0.823240336780769,0,0,0.791951872933429,0,0,0,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0.179060963239896,1.2329365839288,0.197030760201927,0.431255149719035,0.385029108839245,0,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0,0,0.117141414992713,0.300946099727719,0,0,0,0.184369168541703,0.0868836144680828,0.195801157462741,0,0,0,0,1.21251028578504,3.32870879020994,1.5119514666484,0,0,0,0,0,0,0,0.925258162815933,0.355123450626254,0.328508624055237,0.519254429183621,1.04589340613963,0.604297247958111,0,0,0.34444334449382,0.546273504020151,0,0,0.0770153371044148,0,2.92278449306521,0.105551628892876,0,0.340187410553031,0,0,0.812839312631559,0.501689773854853,0.254876273045038,0,0.671624264166535,2.85037839639715,2.87578996127391,0.512900250232778,0,0,0,0,0,0,0,0,0,0.462145851343933,0.767518373630648,0.689182862422653,0,0.145016693914229,0.340906509664404,0,0,0,0,0.10115778085555,0,0,0.6970372701606,0.616067160352178,0.532306030317022,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0.54907405947211,0.117812402345686,0.202182481573316,0,0,0.975267478179181,0,1.05650146756755,0.682499557039929,0.424216295861138,1.13008116620243,0,0.66343897524122,0,0,0,0,0.6196469961995,1.12678241012897,0.286822704408103,0.0982490410131212,0,0,0.211107635297664,0,0.379473173765715,3.14941248220485,0.0962221127255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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8342 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4750 | |||
|TSSclassifier=S | |||
|UniProt=Q99879 | |||
|association_with_transcript=140bp_to_BC066244,BC067485,BC067486,BC067487,BC067488,BC067489_5end | |||
|description=CAGE_peak_4_at_HIST1H2BM_5end | |||
|id=chr6:27782962..27782988,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002577;3.23e-09;3!CL:0000764;3.94e-07;2!CL:0000558;3.94e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,2.26e-09,3;CL:0000817,5.42e-09,3;CL:0000764,3.53e-07,2;CL:0000765,3.53e-07,2;CL:0000050,3.53e-07,2;CL:0000038,3.53e-07,2;CL:0000558,3.53e-07,2;CL:0000547,3.53e-07,2;CL:0000549,3.53e-07,2;CL:0000550,3.53e-07,2;CL:0000552,3.53e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000954;9.60e-07;2 | |||
|ontology_enrichment_disease=DOID:2531!1.58e-11!51;DOID:0060083!1.58e-11!51;DOID:1240!1.30e-08!39;DOID:0060058!4.51e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:74;7.51e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.36e-10,51;DOID:0060083,1.36e-10,51;DOID:1240,6.73e-08,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;5.31e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,4.08e-07,4;UBERON:0004340,4.08e-07,4 | |||
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| |||
|short_description=p4@HIST1H2BM | |||
}} |
Revision as of 19:49, 13 September 2013
Short description: | p4@HIST1H2BM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_HIST1H2BM_5end |
Coexpression cluster: | NA |
Association with transcript: | 140bp_to_BC066244, BC067485, BC067486, BC067487, BC067488, BC067489_5end |
EntrezGene: | HIST1H2BM |
HGNC: | 4750 |
UniProt: | Q99879 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 2.26e-09 | 3 |
precursor B cell | 5.42e-09 | 3 |
erythroid lineage cell | 3.53e-07 | 2 |
erythroblast | 3.53e-07 | 2 |
megakaryocyte-erythroid progenitor cell | 3.53e-07 | 2 |
erythroid progenitor cell | 3.53e-07 | 2 |
reticulocyte | 3.53e-07 | 2 |
proerythroblast | 3.53e-07 | 2 |
basophilic erythroblast | 3.53e-07 | 2 |
polychromatophilic erythroblast | 3.53e-07 | 2 |
orthochromatic erythroblast | 3.53e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.36e-10 | 51 |
immune system cancer | 1.36e-10 | 51 |
leukemia | 6.73e-08 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.