FFCP PHASE1:Mm9::chr1:82767882..82767885,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=25|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:82767882..82767885,-|id=chr1:82767882..82767885,-|ontology_enrichment_celltype=CL:0002563!1.22e-18!9;CL:0002251!1.22e-18!9;CL:0000239!6.14e-17!6;CL:0000677!6.14e-17!6;CL:0000212!6.14e-17!6;CL:0000584!6.14e-17!6;CL:0000075!2.04e-14!7;CL:0000066!1.94e-11!25;CL:0002076!1.21e-10!15;CL:0000473!2.69e-09!3;CL:0000627!2.69e-09!3;CL:0000682!2.69e-09!3;CL:0000223!1.19e-07!20|ontology_enrichment_celltype_v019_2=CL:0000682,6.97e-22,3;CL:0000239,1.44e-19,6;CL:0000677,1.44e-19,6;CL:0000584,1.44e-19,6;CL:0000075,7.91e-17,7;CL:0000066,1.18e-13,25;CL:0002563,3.62e-13,9;CL:0002251,3.62e-13,9;CL:0000473,9.40e-10,7;CL:0002076,5.17e-08,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!4.31e-20!15;UBERON:0003350!1.22e-18!9;UBERON:0004808!1.22e-18!9;UBERON:0001277!1.22e-18!9;UBERON:0001242!1.09e-15!13;UBERON:0000060!1.09e-15!13;UBERON:0001262!1.09e-15!13;UBERON:0004786!1.09e-15!13;UBERON:0000485!5.26e-15!11;UBERON:0004923!6.75e-14!24;UBERON:0000014!1.45e-09!5;UBERON:0001003!1.45e-09!5;UBERON:0002097!1.45e-09!5;UBERON:0002199!1.45e-09!5;UBERON:0007029!1.45e-09!5;UBERON:0007376!1.45e-09!5;UBERON:0002416!1.45e-09!5;UBERON:0007383!1.45e-09!5|ontology_enrichment_uberon_v019_2=UBERON:0000014,2.27e-14,5;UBERON:0001003,2.27e-14,5;UBERON:0002097,2.27e-14,5;UBERON:0002199,2.27e-14,5;UBERON:0007029,2.27e-14,5;UBERON:0007376,2.27e-14,5;UBERON:0002416,2.27e-14,5;UBERON:0007383,2.27e-14,5;UBERON:0003350,3.62e-13,9;UBERON:0004808,3.62e-13,9;UBERON:0001277,3.62e-13,9;UBERON:0000485,7.86e-11,11;UBERON:0001242,3.31e-09,13;UBERON:0001262,3.31e-09,13;UBERON:0004786,3.31e-09,13;UBERON:0000344,5.17e-08,15|phase1_expression=0,6.2815573375085,0.909998478779072,3.0246421130683,7.01254021924886,1.84667199103079,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,0.68822784320151,4.59385571292016,1.7230479846363,2.80112602491656,0,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.264450566663544,0,0.232236671860439,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.7069239588451,0,0.180938774784468,26.1425433366869,69.595741491906,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0.499621155875892,0.701794825336225,0.429742108096597,0,27.3533359708199,7.18790290423307|short_description=p@chr1:82767882..82767885,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=25 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:82767882..82767885,- | |||
|id=chr1:82767882..82767885,- | |||
|ontology_enrichment_celltype=CL:0002563!1.22e-18!9;CL:0002251!1.22e-18!9;CL:0000239!6.14e-17!6;CL:0000677!6.14e-17!6;CL:0000212!6.14e-17!6;CL:0000584!6.14e-17!6;CL:0000075!2.04e-14!7;CL:0000066!1.94e-11!25;CL:0002076!1.21e-10!15;CL:0000473!2.69e-09!3;CL:0000627!2.69e-09!3;CL:0000682!2.69e-09!3;CL:0000223!1.19e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,6.97e-22,3;CL:0000239,1.44e-19,6;CL:0000677,1.44e-19,6;CL:0000584,1.44e-19,6;CL:0000075,7.91e-17,7;CL:0000066,1.18e-13,25;CL:0002563,3.62e-13,9;CL:0002251,3.62e-13,9;CL:0000473,9.40e-10,7;CL:0002076,5.17e-08,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.31e-20!15;UBERON:0003350!1.22e-18!9;UBERON:0004808!1.22e-18!9;UBERON:0001277!1.22e-18!9;UBERON:0001242!1.09e-15!13;UBERON:0000060!1.09e-15!13;UBERON:0001262!1.09e-15!13;UBERON:0004786!1.09e-15!13;UBERON:0000485!5.26e-15!11;UBERON:0004923!6.75e-14!24;UBERON:0000014!1.45e-09!5;UBERON:0001003!1.45e-09!5;UBERON:0002097!1.45e-09!5;UBERON:0002199!1.45e-09!5;UBERON:0007029!1.45e-09!5;UBERON:0007376!1.45e-09!5;UBERON:0002416!1.45e-09!5;UBERON:0007383!1.45e-09!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,2.27e-14,5;UBERON:0001003,2.27e-14,5;UBERON:0002097,2.27e-14,5;UBERON:0002199,2.27e-14,5;UBERON:0007029,2.27e-14,5;UBERON:0007376,2.27e-14,5;UBERON:0002416,2.27e-14,5;UBERON:0007383,2.27e-14,5;UBERON:0003350,3.62e-13,9;UBERON:0004808,3.62e-13,9;UBERON:0001277,3.62e-13,9;UBERON:0000485,7.86e-11,11;UBERON:0001242,3.31e-09,13;UBERON:0001262,3.31e-09,13;UBERON:0004786,3.31e-09,13;UBERON:0000344,5.17e-08,15 | |||
|phase1_expression=0,6.2815573375085,0.909998478779072,3.0246421130683,7.01254021924886,1.84667199103079,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,0.68822784320151,4.59385571292016,1.7230479846363,2.80112602491656,0,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.264450566663544,0,0.232236671860439,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.7069239588451,0,0.180938774784468,26.1425433366869,69.595741491906,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0.499621155875892,0.701794825336225,0.429742108096597,0,27.3533359708199,7.18790290423307 | |||
|short_description=p@chr1:82767882..82767885,- | |||
}} |
Revision as of 21:04, 13 September 2013
Short description: | p@chr1:82767882..82767885, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:82767882..82767885, - |
Coexpression cluster: | MCL_coexpression_mm9:25 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 6.97e-22 | 3 |
brush border epithelial cell | 1.44e-19 | 6 |
gut absorptive cell | 1.44e-19 | 6 |
enterocyte | 1.44e-19 | 6 |
columnar/cuboidal epithelial cell | 7.91e-17 | 7 |
epithelial cell | 1.18e-13 | 25 |
intestinal epithelial cell | 3.62e-13 | 9 |
epithelial cell of alimentary canal | 3.62e-13 | 9 |
defensive cell | 9.40e-10 | 7 |
endo-epithelial cell | 5.17e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
zone of skin | 2.27e-14 | 5 |
skin epidermis | 2.27e-14 | 5 |
skin of body | 2.27e-14 | 5 |
integument | 2.27e-14 | 5 |
surface | 2.27e-14 | 5 |
outer epithelium | 2.27e-14 | 5 |
integumental system | 2.27e-14 | 5 |
enveloping layer of ectoderm | 2.27e-14 | 5 |
epithelium of mucosa | 3.62e-13 | 9 |
gastrointestinal system epithelium | 3.62e-13 | 9 |
intestinal epithelium | 3.62e-13 | 9 |
simple columnar epithelium | 7.86e-11 | 11 |
intestinal mucosa | 3.31e-09 | 13 |
wall of intestine | 3.31e-09 | 13 |
gastrointestinal system mucosa | 3.31e-09 | 13 |
mucosa | 5.17e-08 | 15 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.