FFCP PHASE1:Mm9::chr1:95057484..95057532,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=71874|HGNC=|MCL_coexpression_id=604|UniProt=Q8CEZ4|association_with_transcript=0bp_to_ENSMUST00000043718,NM_172411,uc007cdk.2_5end|description=CAGE_peak_1_at_2310007B03Rik_5end|id=chr1:95057484..95057532,-|ontology_enrichment_celltype=CL:0002563!6.97e-07!9;CL:0002251!6.97e-07!9|ontology_enrichment_celltype_v019_2=CL:0000066,1.10e-10,25;CL:0002076,2.19e-10,15;CL:0002563,2.79e-10,9;CL:0002251,2.79e-10,9;CL:0000239,4.80e-10,6;CL:0000677,4.80e-10,6;CL:0000584,4.80e-10,6;CL:0000075,1.82e-08,7;CL:0000223,1.99e-08,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!4.46e-14!43;UBERON:0005409!1.82e-12!59;UBERON:0004119!1.60e-11!130;UBERON:0000925!1.60e-11!130;UBERON:0006595!1.60e-11!130;UBERON:0001007!1.82e-11!128;UBERON:0001555!1.82e-11!128;UBERON:0007026!1.82e-11!128;UBERON:0000344!2.53e-11!15;UBERON:0004921!1.93e-10!126;UBERON:0004185!1.93e-10!126;UBERON:0001242!7.93e-10!13;UBERON:0000060!7.93e-10!13;UBERON:0001262!7.93e-10!13;UBERON:0004786!7.93e-10!13;UBERON:0005178!9.61e-08!17;UBERON:0005181!9.61e-08!17;UBERON:0002224!9.61e-08!17;UBERON:0000915!9.61e-08!17;UBERON:0008947!9.61e-08!17;UBERON:0003258!9.61e-08!17;UBERON:0004923!3.32e-07!24;UBERON:0003350!6.97e-07!9;UBERON:0004808!6.97e-07!9;UBERON:0001277!6.97e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.13e-37,31;UBERON:0005409,1.09e-23,47;UBERON:0001007,6.28e-21,116;UBERON:0001555,6.28e-21,116;UBERON:0007026,6.28e-21,116;UBERON:0004119,2.30e-20,118;UBERON:0000925,2.30e-20,118;UBERON:0006595,2.30e-20,118;UBERON:0004921,6.06e-19,114;UBERON:0000344,1.62e-18,15;UBERON:0001242,9.96e-16,13;UBERON:0001262,9.96e-16,13;UBERON:0004786,9.96e-16,13;UBERON:0005178,2.61e-11,17;UBERON:0005181,2.61e-11,17;UBERON:0002224,2.61e-11,17;UBERON:0000915,2.61e-11,17;UBERON:0008947,2.61e-11,17;UBERON:0003258,2.61e-11,17;UBERON:0003350,2.79e-10,9;UBERON:0004808,2.79e-10,9;UBERON:0001277,2.79e-10,9;UBERON:0004923,3.66e-10,24;UBERON:0002048,3.09e-08,14;UBERON:0000117,3.09e-08,14;UBERON:0000171,3.09e-08,14;UBERON:0000170,3.09e-08,14;UBERON:0005597,3.09e-08,14;UBERON:0000118,3.09e-08,14;UBERON:0000485,4.05e-08,11;UBERON:0002108,2.92e-07,4|phase1_expression=0,4.18770489167233,7.27998783023258,7.25914107136392,4.50806156951712,5.20425742926858,5.13947809310157,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,4.15980299262857,6.19405058881359,6.31655160526522,4.73838195774982,8.40337807474967,8.36103045608045,5.79669298447841,1.55211357458713,0,0,0,1.1554064790051,0.166234645358492,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07940638327563,0,0,0.421333260395256,0,0,0,0,0,0,0,1.73192832808971,2.28023878927589,2.52762222507392,0.5709193985953,0,0,0,0.304465478312141,0,0,0,0,0.741584903203122,0,0,0,0,0,5.59175283654366,0,0.209446706813455,5.10914110417183,0,0,0,0,0,0,0,0,0,0,0.407357455401265,0.124406970610093,0.252722758433675,0.210441855886474,0.130120442962704,0.229902104433473,0,0.150704817835715,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0.278047249225598,0.348252166522167,0.61734640922383,0,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,5.61711931072457,5.55346189993443,0,0,1.54640953586512,8.67239155880373,7.11609740303585,9.70150693174052,5.21981967698963,9.88193728344065,16.5881237808178,12.5342577385925,17.3518037536017,6.29173586057955,3.24207074812041,3.78368419183298,0,0.228497025219458,0,0.203651327845314,0.387904974335251,1.19230893813542,2.90888070771584,3.39503340353085,3.1399745568275,3.20832626196681,0,0,0,0.224862112384854,0,0,0.50925170356284,2.01387296215567,0,0.823684239564244,1.43768206527355,0.372140947668503,0.312037673114561,1.26289438973556,0.179397413521912,0,4.24932337383191,0,0.325929952884052,0,1.64283173801951,2.34508760418542,2.38043640886014,2.14647012643579,1.57635144106191,2.21464689648775,0.637819074629948,1.3109065177259,1.20879487306127,2.16973587872267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0.162886959353576,0.494910368917606,0,0,0.302323556964751,0,0,0,2.06742634534577,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0.164549020602121,0,0.704015124191131,0,0,0.16488625294148,0,0.180938774784468,0.238744688006273,0.328281799490123,11.9507143018239,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.203319467126849,0.972048067396211,0.836353184057875,0.655087691238533,0.404593039154462,0.330613822901344,0,5.18459893167171,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0.0762068066549998,0,0.0974578807397524,0,0,0.453460767230423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.735374033800057,0.666740183404846,0.618105171716683,1.28367683836726,0.758091635291392,0.760437899670719,0.754505365544305,0.749132059759059,0.704276676453562,0.804096565378586,0,0.231768651889711,0.77163688185482,0.824171801606613,0.588795680537589,0,0.177475806159338,0.238436189947321,0.872078499793971,0.846984423737976,0.676916863133412,1.09756783723664,0,0.543216455383447,0.561142271657738,0.830445126869219,0.394017929502254,0.818462086339379,0.77468420592983,0.771626443924566,0.749431733813838,0.935726433781634,1.07435527024149,0,0,0|short_description=p1@2310007B03Rik}} | ||
|EntrezGene=71874 | |||
|HGNC= | |||
|MCL_coexpression_id=604 | |||
|UniProt=Q8CEZ4 | |||
|association_with_transcript=0bp_to_ENSMUST00000043718,NM_172411,uc007cdk.2_5end | |||
|description=CAGE_peak_1_at_2310007B03Rik_5end | |||
|id=chr1:95057484..95057532,- | |||
|ontology_enrichment_celltype=CL:0002563!6.97e-07!9;CL:0002251!6.97e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.10e-10,25;CL:0002076,2.19e-10,15;CL:0002563,2.79e-10,9;CL:0002251,2.79e-10,9;CL:0000239,4.80e-10,6;CL:0000677,4.80e-10,6;CL:0000584,4.80e-10,6;CL:0000075,1.82e-08,7;CL:0000223,1.99e-08,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.46e-14!43;UBERON:0005409!1.82e-12!59;UBERON:0004119!1.60e-11!130;UBERON:0000925!1.60e-11!130;UBERON:0006595!1.60e-11!130;UBERON:0001007!1.82e-11!128;UBERON:0001555!1.82e-11!128;UBERON:0007026!1.82e-11!128;UBERON:0000344!2.53e-11!15;UBERON:0004921!1.93e-10!126;UBERON:0004185!1.93e-10!126;UBERON:0001242!7.93e-10!13;UBERON:0000060!7.93e-10!13;UBERON:0001262!7.93e-10!13;UBERON:0004786!7.93e-10!13;UBERON:0005178!9.61e-08!17;UBERON:0005181!9.61e-08!17;UBERON:0002224!9.61e-08!17;UBERON:0000915!9.61e-08!17;UBERON:0008947!9.61e-08!17;UBERON:0003258!9.61e-08!17;UBERON:0004923!3.32e-07!24;UBERON:0003350!6.97e-07!9;UBERON:0004808!6.97e-07!9;UBERON:0001277!6.97e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.13e-37,31;UBERON:0005409,1.09e-23,47;UBERON:0001007,6.28e-21,116;UBERON:0001555,6.28e-21,116;UBERON:0007026,6.28e-21,116;UBERON:0004119,2.30e-20,118;UBERON:0000925,2.30e-20,118;UBERON:0006595,2.30e-20,118;UBERON:0004921,6.06e-19,114;UBERON:0000344,1.62e-18,15;UBERON:0001242,9.96e-16,13;UBERON:0001262,9.96e-16,13;UBERON:0004786,9.96e-16,13;UBERON:0005178,2.61e-11,17;UBERON:0005181,2.61e-11,17;UBERON:0002224,2.61e-11,17;UBERON:0000915,2.61e-11,17;UBERON:0008947,2.61e-11,17;UBERON:0003258,2.61e-11,17;UBERON:0003350,2.79e-10,9;UBERON:0004808,2.79e-10,9;UBERON:0001277,2.79e-10,9;UBERON:0004923,3.66e-10,24;UBERON:0002048,3.09e-08,14;UBERON:0000117,3.09e-08,14;UBERON:0000171,3.09e-08,14;UBERON:0000170,3.09e-08,14;UBERON:0005597,3.09e-08,14;UBERON:0000118,3.09e-08,14;UBERON:0000485,4.05e-08,11;UBERON:0002108,2.92e-07,4 | |||
|phase1_expression=0,4.18770489167233,7.27998783023258,7.25914107136392,4.50806156951712,5.20425742926858,5.13947809310157,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,4.15980299262857,6.19405058881359,6.31655160526522,4.73838195774982,8.40337807474967,8.36103045608045,5.79669298447841,1.55211357458713,0,0,0,1.1554064790051,0.166234645358492,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07940638327563,0,0,0.421333260395256,0,0,0,0,0,0,0,1.73192832808971,2.28023878927589,2.52762222507392,0.5709193985953,0,0,0,0.304465478312141,0,0,0,0,0.741584903203122,0,0,0,0,0,5.59175283654366,0,0.209446706813455,5.10914110417183,0,0,0,0,0,0,0,0,0,0,0.407357455401265,0.124406970610093,0.252722758433675,0.210441855886474,0.130120442962704,0.229902104433473,0,0.150704817835715,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0.278047249225598,0.348252166522167,0.61734640922383,0,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,5.61711931072457,5.55346189993443,0,0,1.54640953586512,8.67239155880373,7.11609740303585,9.70150693174052,5.21981967698963,9.88193728344065,16.5881237808178,12.5342577385925,17.3518037536017,6.29173586057955,3.24207074812041,3.78368419183298,0,0.228497025219458,0,0.203651327845314,0.387904974335251,1.19230893813542,2.90888070771584,3.39503340353085,3.1399745568275,3.20832626196681,0,0,0,0.224862112384854,0,0,0.50925170356284,2.01387296215567,0,0.823684239564244,1.43768206527355,0.372140947668503,0.312037673114561,1.26289438973556,0.179397413521912,0,4.24932337383191,0,0.325929952884052,0,1.64283173801951,2.34508760418542,2.38043640886014,2.14647012643579,1.57635144106191,2.21464689648775,0.637819074629948,1.3109065177259,1.20879487306127,2.16973587872267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0.162886959353576,0.494910368917606,0,0,0.302323556964751,0,0,0,2.06742634534577,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0.164549020602121,0,0.704015124191131,0,0,0.16488625294148,0,0.180938774784468,0.238744688006273,0.328281799490123,11.9507143018239,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.203319467126849,0.972048067396211,0.836353184057875,0.655087691238533,0.404593039154462,0.330613822901344,0,5.18459893167171,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0.0762068066549998,0,0.0974578807397524,0,0,0.453460767230423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.735374033800057,0.666740183404846,0.618105171716683,1.28367683836726,0.758091635291392,0.760437899670719,0.754505365544305,0.749132059759059,0.704276676453562,0.804096565378586,0,0.231768651889711,0.77163688185482,0.824171801606613,0.588795680537589,0,0.177475806159338,0.238436189947321,0.872078499793971,0.846984423737976,0.676916863133412,1.09756783723664,0,0.543216455383447,0.561142271657738,0.830445126869219,0.394017929502254,0.818462086339379,0.77468420592983,0.771626443924566,0.749431733813838,0.935726433781634,1.07435527024149,0,0,0 | |||
|short_description=p1@2310007B03Rik | |||
}} |
Revision as of 21:20, 13 September 2013
Short description: | p1@2310007B03Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_2310007B03Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:604 |
Association with transcript: | 0bp_to_ENSMUST00000043718, NM_172411, uc007cdk.2_5end |
EntrezGene: | 2310007B03Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.10e-10 | 25 |
endo-epithelial cell | 2.19e-10 | 15 |
intestinal epithelial cell | 2.79e-10 | 9 |
epithelial cell of alimentary canal | 2.79e-10 | 9 |
brush border epithelial cell | 4.80e-10 | 6 |
gut absorptive cell | 4.80e-10 | 6 |
enterocyte | 4.80e-10 | 6 |
columnar/cuboidal epithelial cell | 1.82e-08 | 7 |
endodermal cell | 1.99e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.13e-37 | 31 |
gastrointestinal system | 1.09e-23 | 47 |
digestive system | 6.28e-21 | 116 |
digestive tract | 6.28e-21 | 116 |
primitive gut | 6.28e-21 | 116 |
endoderm-derived structure | 2.30e-20 | 118 |
endoderm | 2.30e-20 | 118 |
presumptive endoderm | 2.30e-20 | 118 |
subdivision of digestive tract | 6.06e-19 | 114 |
mucosa | 1.62e-18 | 15 |
intestinal mucosa | 9.96e-16 | 13 |
wall of intestine | 9.96e-16 | 13 |
gastrointestinal system mucosa | 9.96e-16 | 13 |
thoracic cavity element | 2.61e-11 | 17 |
thoracic segment organ | 2.61e-11 | 17 |
thoracic cavity | 2.61e-11 | 17 |
thoracic segment of trunk | 2.61e-11 | 17 |
respiratory primordium | 2.61e-11 | 17 |
endoderm of foregut | 2.61e-11 | 17 |
epithelium of mucosa | 2.79e-10 | 9 |
gastrointestinal system epithelium | 2.79e-10 | 9 |
intestinal epithelium | 2.79e-10 | 9 |
organ component layer | 3.66e-10 | 24 |
lung | 3.09e-08 | 14 |
respiratory tube | 3.09e-08 | 14 |
respiration organ | 3.09e-08 | 14 |
pair of lungs | 3.09e-08 | 14 |
lung primordium | 3.09e-08 | 14 |
lung bud | 3.09e-08 | 14 |
simple columnar epithelium | 4.05e-08 | 11 |
small intestine | 2.92e-07 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.