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FFCP PHASE1:Mm9::chr3:122433170..122433179,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=242202|HGNC=|MCL_coexpression_id=24|UniProt=Q8BJ62|association_with_transcript=30bp_to_ENSMUST00000073213,uc008reu.1_5end|description=CAGE_peak_7_at_Pde5a_5end|id=chr3:122433170..122433179,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002563,2.85e-09,9;CL:0002251,2.85e-09,9;CL:0000239,4.67e-07,6;CL:0000677,4.67e-07,6;CL:0000584,4.67e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!2.69e-15!59;UBERON:0000160!1.60e-13!43;UBERON:0000344!5.25e-09!15;UBERON:0001242!3.81e-08!13;UBERON:0000060!3.81e-08!13;UBERON:0001262!3.81e-08!13;UBERON:0004786!3.81e-08!13;UBERON:0005157!1.49e-07!27;UBERON:0004119!1.62e-07!130;UBERON:0000925!1.62e-07!130;UBERON:0006595!1.62e-07!130;UBERON:0001007!2.41e-07!128;UBERON:0001555!2.41e-07!128;UBERON:0007026!2.41e-07!128;UBERON:0002048!2.59e-07!14;UBERON:0000117!2.59e-07!14;UBERON:0000171!2.59e-07!14;UBERON:0000170!2.59e-07!14;UBERON:0005597!2.59e-07!14;UBERON:0000118!2.59e-07!14;UBERON:0004921!9.48e-07!126;UBERON:0004185!9.48e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.28e-28,47;UBERON:0000160,4.44e-26,31;UBERON:0004119,6.82e-16,118;UBERON:0000925,6.82e-16,118;UBERON:0006595,6.82e-16,118;UBERON:0001007,1.29e-15,116;UBERON:0001555,1.29e-15,116;UBERON:0007026,1.29e-15,116;UBERON:0000344,4.45e-15,15;UBERON:0004921,2.25e-14,114;UBERON:0001242,1.62e-13,13;UBERON:0001262,1.62e-13,13;UBERON:0004786,1.62e-13,13;UBERON:0002048,8.27e-10,14;UBERON:0000117,8.27e-10,14;UBERON:0000171,8.27e-10,14;UBERON:0000170,8.27e-10,14;UBERON:0005597,8.27e-10,14;UBERON:0000118,8.27e-10,14;UBERON:0003350,2.85e-09,9;UBERON:0004808,2.85e-09,9;UBERON:0001277,2.85e-09,9;UBERON:0004923,7.89e-09,24;UBERON:0005153,1.69e-07,17;UBERON:0005178,1.69e-07,17;UBERON:0005181,1.69e-07,17;UBERON:0002224,1.69e-07,17;UBERON:0000915,1.69e-07,17;UBERON:0008947,1.69e-07,17;UBERON:0003258,1.69e-07,17;UBERON:0000485,3.50e-07,11;UBERON:0005157,6.22e-07,20|phase1_expression=0.80074423552397,3.48975407639361,1.36499771816861,3.93203474698879,7.01254021924886,1.17515490338323,1.40167584357315,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.255129870453209,0,0,1.75991665072747,1.37645568640302,1.72269589234506,1.7230479846363,0.861884930743556,3.04037471130198,4.28451220591882,1.77384408524244,0,0,0,1.44425809875637,1.49611180822643,1.42918549383658,0,0,0,0,0,0,0,0,0.183546752161682,0.782391344348039,0,0,0.388859798148567,0.279972843250725,0,0,0,0,0,0.85960031981627,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0.210324961351382,0,0.220868540951614,0.244981598429908,0.191690942036473,0,0,0.127687338085188,0.46081959976873,0.131886287730194,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0.170430322578058,0,0,0.422530259330042,0,0,0,0.432982082022428,0.506719730950197,0,0.68510327831436,0,1.48442139064825,0.520455980298408,0.608930956624282,0.691846491768175,1.65794904607885,1.17588707135705,1.38233250462643,0,1.15679485535929,0,0.323533699894818,0,0,1.86391761218122,1.17112318804619,2.30391377494801,2.55457055208591,0.11981512450592,0,0,0.449371918214468,0.457500602818626,0.125654352112864,0.173824320192276,0.255715457330331,0.20778804455956,0,1.32391173005411,0.746441823660558,0,0.420883711772948,0,0.459804208866946,0.720248519221397,0.30140963567143,0.816437989815934,0.896796041993948,1.03071897015702,0.517406741478031,0,0.189106080167819,0.351902248327898,0.219195732427575,0.834141747676794,1.0447564995665,0.61734640922383,0.398068533636986,0,0,0,0,0,0.180062061461015,0.473489471170421,0.196764231747404,0.617068451549513,0.465067889500816,0.268273401399619,0.116765342367169,0.16455984991348,0.164167464079095,0.486412857275134,0.292399974850665,0.439100230582101,0.134206418760372,0,0.205809224758569,1.98251269790279,2.64450566663544,0.853153002140936,1.62565670302307,1.41754207454303,1.61346819698674,1.11189021922435,0.951128130562796,3.32170343081158,2.30578536613615,2.5133520880027,1.39269530428806,3.11942539390592,1.79763881730844,1.08069024937347,2.19055400579804,0.569003702859245,0.342745537829186,0,0.610953983535943,0.387904974335251,0.49095073923223,0.252946148497029,0.147610147979602,0.31399745568275,0.493588655687202,0,0,0.196558995113203,0,0.202860121388503,0.482354319504834,0.25462585178142,0.575392274901621,0,0,0,0.372140947668503,0,0.252578877947112,0,0,0.923765950833023,0.568474235311454,2.28150967018836,2.20668611507745,1.87752198630802,1.00503754465089,2.14239276797412,3.31727201358258,2.52216230569906,1.55025282754142,4.14582398509466,1.47476983244164,1.38147985492716,1.15719246865209,0,0,0,0,0.321101179975584,0.703270119553219,0,0.757412781613119,0.94652465824877,0.780877488593277,1.29254038639679,0.955875191810208,2.00518806674155,0.849229592366497,0.809621403349789,0.584511715822624,1.18586333383957,0.963963949265421,0.99358059645788,0.35613120733451,1.14020871547503,2.63952196756057,0,0,0.604647113929502,0.943025398779491,0.295301892880773,0.614870295887855,0.258428293168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|EntrezGene=242202
|HGNC=
|MCL_coexpression_id=24
|UniProt=Q8BJ62
|association_with_transcript=30bp_to_ENSMUST00000073213,uc008reu.1_5end
|description=CAGE_peak_7_at_Pde5a_5end
|id=chr3:122433170..122433179,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002563,2.85e-09,9;CL:0002251,2.85e-09,9;CL:0000239,4.67e-07,6;CL:0000677,4.67e-07,6;CL:0000584,4.67e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005409!2.69e-15!59;UBERON:0000160!1.60e-13!43;UBERON:0000344!5.25e-09!15;UBERON:0001242!3.81e-08!13;UBERON:0000060!3.81e-08!13;UBERON:0001262!3.81e-08!13;UBERON:0004786!3.81e-08!13;UBERON:0005157!1.49e-07!27;UBERON:0004119!1.62e-07!130;UBERON:0000925!1.62e-07!130;UBERON:0006595!1.62e-07!130;UBERON:0001007!2.41e-07!128;UBERON:0001555!2.41e-07!128;UBERON:0007026!2.41e-07!128;UBERON:0002048!2.59e-07!14;UBERON:0000117!2.59e-07!14;UBERON:0000171!2.59e-07!14;UBERON:0000170!2.59e-07!14;UBERON:0005597!2.59e-07!14;UBERON:0000118!2.59e-07!14;UBERON:0004921!9.48e-07!126;UBERON:0004185!9.48e-07!126
|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.28e-28,47;UBERON:0000160,4.44e-26,31;UBERON:0004119,6.82e-16,118;UBERON:0000925,6.82e-16,118;UBERON:0006595,6.82e-16,118;UBERON:0001007,1.29e-15,116;UBERON:0001555,1.29e-15,116;UBERON:0007026,1.29e-15,116;UBERON:0000344,4.45e-15,15;UBERON:0004921,2.25e-14,114;UBERON:0001242,1.62e-13,13;UBERON:0001262,1.62e-13,13;UBERON:0004786,1.62e-13,13;UBERON:0002048,8.27e-10,14;UBERON:0000117,8.27e-10,14;UBERON:0000171,8.27e-10,14;UBERON:0000170,8.27e-10,14;UBERON:0005597,8.27e-10,14;UBERON:0000118,8.27e-10,14;UBERON:0003350,2.85e-09,9;UBERON:0004808,2.85e-09,9;UBERON:0001277,2.85e-09,9;UBERON:0004923,7.89e-09,24;UBERON:0005153,1.69e-07,17;UBERON:0005178,1.69e-07,17;UBERON:0005181,1.69e-07,17;UBERON:0002224,1.69e-07,17;UBERON:0000915,1.69e-07,17;UBERON:0008947,1.69e-07,17;UBERON:0003258,1.69e-07,17;UBERON:0000485,3.50e-07,11;UBERON:0005157,6.22e-07,20
|phase1_expression=0.80074423552397,3.48975407639361,1.36499771816861,3.93203474698879,7.01254021924886,1.17515490338323,1.40167584357315,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.255129870453209,0,0,1.75991665072747,1.37645568640302,1.72269589234506,1.7230479846363,0.861884930743556,3.04037471130198,4.28451220591882,1.77384408524244,0,0,0,1.44425809875637,1.49611180822643,1.42918549383658,0,0,0,0,0,0,0,0,0.183546752161682,0.782391344348039,0,0,0.388859798148567,0.279972843250725,0,0,0,0,0,0.85960031981627,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0.210324961351382,0,0.220868540951614,0.244981598429908,0.191690942036473,0,0,0.127687338085188,0.46081959976873,0.131886287730194,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0.170430322578058,0,0,0.422530259330042,0,0,0,0.432982082022428,0.506719730950197,0,0.68510327831436,0,1.48442139064825,0.520455980298408,0.608930956624282,0.691846491768175,1.65794904607885,1.17588707135705,1.38233250462643,0,1.15679485535929,0,0.323533699894818,0,0,1.86391761218122,1.17112318804619,2.30391377494801,2.55457055208591,0.11981512450592,0,0,0.449371918214468,0.457500602818626,0.125654352112864,0.173824320192276,0.255715457330331,0.20778804455956,0,1.32391173005411,0.746441823660558,0,0.420883711772948,0,0.459804208866946,0.720248519221397,0.30140963567143,0.816437989815934,0.896796041993948,1.03071897015702,0.517406741478031,0,0.189106080167819,0.351902248327898,0.219195732427575,0.834141747676794,1.0447564995665,0.61734640922383,0.398068533636986,0,0,0,0,0,0.180062061461015,0.473489471170421,0.196764231747404,0.617068451549513,0.465067889500816,0.268273401399619,0.116765342367169,0.16455984991348,0.164167464079095,0.486412857275134,0.292399974850665,0.439100230582101,0.134206418760372,0,0.205809224758569,1.98251269790279,2.64450566663544,0.853153002140936,1.62565670302307,1.41754207454303,1.61346819698674,1.11189021922435,0.951128130562796,3.32170343081158,2.30578536613615,2.5133520880027,1.39269530428806,3.11942539390592,1.79763881730844,1.08069024937347,2.19055400579804,0.569003702859245,0.342745537829186,0,0.610953983535943,0.387904974335251,0.49095073923223,0.252946148497029,0.147610147979602,0.31399745568275,0.493588655687202,0,0,0.196558995113203,0,0.202860121388503,0.482354319504834,0.25462585178142,0.575392274901621,0,0,0,0.372140947668503,0,0.252578877947112,0,0,0.923765950833023,0.568474235311454,2.28150967018836,2.20668611507745,1.87752198630802,1.00503754465089,2.14239276797412,3.31727201358258,2.52216230569906,1.55025282754142,4.14582398509466,1.47476983244164,1.38147985492716,1.15719246865209,0,0,0,0,0.321101179975584,0.703270119553219,0,0.757412781613119,0.94652465824877,0.780877488593277,1.29254038639679,0.955875191810208,2.00518806674155,0.849229592366497,0.809621403349789,0.584511715822624,1.18586333383957,0.963963949265421,0.99358059645788,0.35613120733451,1.14020871547503,2.63952196756057,0,0,0.604647113929502,0.943025398779491,0.295301892880773,0.614870295887855,0.258428293168221,0.727067458955011,0.356497378384721,0,2.10837217149998,1.03135543248187,0.340439605753788,1.08036656418786,0.388076051348264,1.07168517515796,0.709360934569094,0.178368817602071,0.822745103010605,0.304464949114599,0.23467170806371,1.27099242518292,0.441056796109924,0.49465875882444,0.484393280087717,0.361877549568935,0,0.328281799490123,1.7488850197791,0.18542530201051,0.170870880797853,0.206386867963223,0.185194527369712,0.188368457004691,0,0,0,0,0,0.954670618015114,1.26534397432454,2.23651413839534,1.62008011232702,2.50905955217362,1.9652630737156,2.15782954215713,3.14083131756277,1.57053565190418,4.01806417204558,0,0,0.299033092087958,0.992750942742586,1.16670713006429,1.03327858782185,1.18269287843545,0.58678619322877,1.3020438484395,0.419437377702843,0.483168241652012,0,0.632022241256357,0.608175645870493,0.616265742988964,0,0.537080087002444,0.198681354781265,0.360586348559907,0.295379054349154,0.504832249740738,0.304827226619999,0.201652370273681,0.292373642219257,0.288635524920988,0,0.226730383615211,0,0,0.167884616364078,4.44336066274038,0.563047426353546,2.19781949120718,0.857473516316263,0.501572104035363,0,0.460325236507177,0.572895513439397,0,0,0.755393897389701,0.675022500231806,0.900642406448441,0.453142408984205,0.51776031175182,0,0,0.682934423016537,0.243106717068294,0.419226325255965,0.551530525350042,1.33348036680969,0.618105171716683,0.64183841918363,0.505394423527595,0,1.32038438970253,0.749132059759059,0.832326981263301,0.746661096422973,0.476293691283074,0.579421629724277,0.77163688185482,0.412085900803307,0.147198920134397,0.685738504770831,1.24233064311536,2.14592570952589,0.436039249896986,0.564656282491984,0.507687647350059,0.914639864363863,0.263069711437843,0.814824683075171,1.12228454331548,1.30498519936592,0.591026894253381,0.409231043169689,0.154936841185966,0,0.499621155875892,0.935726433781634,0.644613162144895,0.382576664137687,0,0.231867835620421
|short_description=p7@Pde5a
}}

Revision as of 01:24, 14 September 2013

Short description:p7@Pde5a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_7_at_Pde5a_5end
Coexpression cluster:MCL_coexpression_mm9:24
Association with transcript: 30bp_to_ENSMUST00000073213, uc008reu.1_5end
EntrezGene:Pde5a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p7@Pde5a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.93
CD326+ enterocyte, pool2.CNhs13197.11849-124I47.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.40
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B93.04
Ileum epithelium, pool2.CNhs13232.10253-104C14.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.43
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.48
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F51.66
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I31.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I22.30
colon, adult.CNhs10468.36-18H72.55
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.32
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G81.03
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I31.98
intestine, adult.CNhs10496.178-9A32.64
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D81.42
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E92.31
intestine, neonate N06.CNhs11102.688-20B82.51
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A53.12
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G12.19
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F82.28
lung, embryo E15.CNhs11020.432-17C52.21
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I62.14
lung, neonate N00.CNhs11224.640-42C63.32
lung, neonate N06.CNhs11212.683-20E52.52
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E64.15
lung, neonate N20.CNhs11109.822-18A41.47
lung, neonate N25.CNhs11119.1359-25C71.38
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G62.64
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G31.27
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G82.24
stomach, embryo E16.CNhs11022.459-17D41.62
stomach, embryo E17.CNhs11006.1035-18D52.51
stomach, embryo E18.CNhs10999.1286-20C61.97
stomach, neonate N03.CNhs11193.1340-24B82.16
stomach, neonate N07.CNhs11210.718-18A93.14
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I14.02
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I41.30
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E44.44
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E52.20
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
intestinal epithelial cell2.85e-099
epithelial cell of alimentary canal2.85e-099
brush border epithelial cell4.67e-076
gut absorptive cell4.67e-076
enterocyte4.67e-076

Uber anatomy
Ontology termp-valuen
gastrointestinal system2.28e-2847
intestine4.44e-2631
endoderm-derived structure6.82e-16118
endoderm6.82e-16118
presumptive endoderm6.82e-16118
digestive system1.29e-15116
digestive tract1.29e-15116
primitive gut1.29e-15116
mucosa4.45e-1515
subdivision of digestive tract2.25e-14114
intestinal mucosa1.62e-1313
wall of intestine1.62e-1313
gastrointestinal system mucosa1.62e-1313
lung8.27e-1014
respiratory tube8.27e-1014
respiration organ8.27e-1014
pair of lungs8.27e-1014
lung primordium8.27e-1014
lung bud8.27e-1014
epithelium of mucosa2.85e-099
gastrointestinal system epithelium2.85e-099
intestinal epithelium2.85e-099
organ component layer7.89e-0924
epithelial bud1.69e-0717
thoracic cavity element1.69e-0717
thoracic segment organ1.69e-0717
thoracic cavity1.69e-0717
thoracic segment of trunk1.69e-0717
respiratory primordium1.69e-0717
endoderm of foregut1.69e-0717
simple columnar epithelium3.50e-0711
epithelial fold6.22e-0720







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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