FFCP PHASE1:Mm9::chr4:132909391..132909420,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=230796|HGNC=|MCL_coexpression_id=363|UniProt=A2AE97|association_with_transcript=0bp_to_ENSMUST00000140976,uc008vcr.2_5end|description=CAGE_peak_9_at_Wdtc1_5end|id=chr4:132909391..132909420,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,2.14e-11,6;CL:0000677,2.14e-11,6;CL:0000584,2.14e-11,6;CL:0000075,1.18e-09,7;CL:0002563,2.49e-07,9;CL:0002251,2.49e-07,9;CL:0000473,3.40e-07,7;CL:0000066,5.45e-07,25;CL:0002092,5.64e-07,3;CL:0002540,5.64e-07,3;CL:0002076,8.34e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,7.75e-07,3;DOID:4045,7.75e-07,3|ontology_enrichment_uberon=UBERON:0004923!2.46e-09!24;UBERON:0000344!2.85e-08!15;UBERON:0001242!8.27e-07!13;UBERON:0000060!8.27e-07!13;UBERON:0001262!8.27e-07!13;UBERON:0004786!8.27e-07!13;UBERON:0005409!9.04e-07!59|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.87e-11,15;UBERON:0004923,5.92e-11,24;UBERON:0000160,3.32e-10,31;UBERON:0001242,2.61e-08,13;UBERON:0001262,2.61e-08,13;UBERON:0004786,2.61e-08,13;UBERON:0005409,2.35e-07,47;UBERON:0003350,2.49e-07,9;UBERON:0004808,2.49e-07,9;UBERON:0001277,2.49e-07,9;UBERON:0005631,9.28e-07,3;UBERON:0000478,9.28e-07,3;UBERON:0000158,9.28e-07,3|phase1_expression=0,6.2815573375085,5.0049916332849,2.11724947914781,1.50268718983904,2.35030980676646,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0.42438965179803,7.48380953329414,0.0992909512008853,0,3.51983330145495,1.60586496747019,1.72269589234506,3.4460959692726,3.23206849028834,0.380046838912748,0.756090389279792,1.33038306393183,0,0,0,0,0,0.204169356262369,6.69650609179052,1.5626706890476,6.28228492768558,12.9410927366823,13.6609096991689,8.25367600152961,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0.514518872071894,0.286533439938757,0,0,0,0,1.35537812827653,0,4.04954872776629,3.9554654502679,3.5524005747305,0.599200221036809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984440513331393,0.0755715601067855,0,0,0,0,0,0,1.12355536105401,0.852151612890289,0.259786004602869,0.35333957451034,0,0,0,0,1.08245520505607,1.52015919285059,0.505524445014783,0.68510327831436,2.84831672011889,0.29688427812965,0.173485326766136,0,0,0.301445281105245,0.23517741427141,0.251333182659351,4.20231445148436,0,0,0,0.220841518460394,0,0,0,0,0.766371165625774,0.239630249011841,0,0.127070227073065,0,0,0,0,0,0,0,0,0.373220911830279,0.252722758433675,0,0,0,0,0,0,0.2562274405697,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,3.30418782983798,2.64450566663544,0,0,0,0,0,0.760902504450237,0.949058123089023,0.823494773620054,0.502670417600539,1.1937388322469,1.75467678407208,1.79763881730844,2.16138049874694,1.59313018603494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0.324270453550071,0.274561413188081,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0.664394068946325,0,0,0.172684981865896,0.144649058581512,6.03165135757089,6.52686820582452,0,0,0,0,0.983609672260053,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05073220482823,3.1774810629573,0,2.14352128823924,0,0.0603129249281559,0.238744688006273,0.492422699235184,2.04036585640896,0,0.170870880797853,0.412773735926445,0.370389054739423,0,0,0,0,0.139951452323658,0.138199973804424,0,0,0,0,0.418176592028937,0.436725127492355,0.539457385539283,1.1571483801547,1.04702376793612,0.648074866458964,0,10.1464728963154,0.149516546043979,0,0,0,0,0,0,0,0,17.5698303817298,0.316011120628178,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,1.33191572024439,1.07656627931371,0.839423081820392,0.19318959403219,1.31377732815827,0.183151624267265,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0.505394423527595,0,0,0.0936415074698824,0.128050304809739,0.114870937911227,0,0,0,0,0.147198920134397,0,0.532427418478012,0,0,0.188218760830661,0,0,0,0.271608227691724,0,0.118635018124174,0,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0|short_description=p9@Wdtc1}} | ||
|EntrezGene=230796 | |||
|HGNC= | |||
|MCL_coexpression_id=363 | |||
|UniProt=A2AE97 | |||
|association_with_transcript=0bp_to_ENSMUST00000140976,uc008vcr.2_5end | |||
|description=CAGE_peak_9_at_Wdtc1_5end | |||
|id=chr4:132909391..132909420,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.14e-11,6;CL:0000677,2.14e-11,6;CL:0000584,2.14e-11,6;CL:0000075,1.18e-09,7;CL:0002563,2.49e-07,9;CL:0002251,2.49e-07,9;CL:0000473,3.40e-07,7;CL:0000066,5.45e-07,25;CL:0002092,5.64e-07,3;CL:0002540,5.64e-07,3;CL:0002076,8.34e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,7.75e-07,3;DOID:4045,7.75e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0004923!2.46e-09!24;UBERON:0000344!2.85e-08!15;UBERON:0001242!8.27e-07!13;UBERON:0000060!8.27e-07!13;UBERON:0001262!8.27e-07!13;UBERON:0004786!8.27e-07!13;UBERON:0005409!9.04e-07!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.87e-11,15;UBERON:0004923,5.92e-11,24;UBERON:0000160,3.32e-10,31;UBERON:0001242,2.61e-08,13;UBERON:0001262,2.61e-08,13;UBERON:0004786,2.61e-08,13;UBERON:0005409,2.35e-07,47;UBERON:0003350,2.49e-07,9;UBERON:0004808,2.49e-07,9;UBERON:0001277,2.49e-07,9;UBERON:0005631,9.28e-07,3;UBERON:0000478,9.28e-07,3;UBERON:0000158,9.28e-07,3 | |||
|phase1_expression=0,6.2815573375085,5.0049916332849,2.11724947914781,1.50268718983904,2.35030980676646,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0.42438965179803,7.48380953329414,0.0992909512008853,0,3.51983330145495,1.60586496747019,1.72269589234506,3.4460959692726,3.23206849028834,0.380046838912748,0.756090389279792,1.33038306393183,0,0,0,0,0,0.204169356262369,6.69650609179052,1.5626706890476,6.28228492768558,12.9410927366823,13.6609096991689,8.25367600152961,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0.514518872071894,0.286533439938757,0,0,0,0,1.35537812827653,0,4.04954872776629,3.9554654502679,3.5524005747305,0.599200221036809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984440513331393,0.0755715601067855,0,0,0,0,0,0,1.12355536105401,0.852151612890289,0.259786004602869,0.35333957451034,0,0,0,0,1.08245520505607,1.52015919285059,0.505524445014783,0.68510327831436,2.84831672011889,0.29688427812965,0.173485326766136,0,0,0.301445281105245,0.23517741427141,0.251333182659351,4.20231445148436,0,0,0,0.220841518460394,0,0,0,0,0.766371165625774,0.239630249011841,0,0.127070227073065,0,0,0,0,0,0,0,0,0.373220911830279,0.252722758433675,0,0,0,0,0,0,0.2562274405697,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,3.30418782983798,2.64450566663544,0,0,0,0,0,0.760902504450237,0.949058123089023,0.823494773620054,0.502670417600539,1.1937388322469,1.75467678407208,1.79763881730844,2.16138049874694,1.59313018603494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0.324270453550071,0.274561413188081,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0.664394068946325,0,0,0.172684981865896,0.144649058581512,6.03165135757089,6.52686820582452,0,0,0,0,0.983609672260053,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05073220482823,3.1774810629573,0,2.14352128823924,0,0.0603129249281559,0.238744688006273,0.492422699235184,2.04036585640896,0,0.170870880797853,0.412773735926445,0.370389054739423,0,0,0,0,0.139951452323658,0.138199973804424,0,0,0,0,0.418176592028937,0.436725127492355,0.539457385539283,1.1571483801547,1.04702376793612,0.648074866458964,0,10.1464728963154,0.149516546043979,0,0,0,0,0,0,0,0,17.5698303817298,0.316011120628178,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,1.33191572024439,1.07656627931371,0.839423081820392,0.19318959403219,1.31377732815827,0.183151624267265,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0.505394423527595,0,0,0.0936415074698824,0.128050304809739,0.114870937911227,0,0,0,0,0.147198920134397,0,0.532427418478012,0,0,0.188218760830661,0,0,0,0.271608227691724,0,0.118635018124174,0,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0 | |||
|short_description=p9@Wdtc1 | |||
}} |
Revision as of 04:00, 14 September 2013
Short description: | p9@Wdtc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Wdtc1_5end |
Coexpression cluster: | MCL_coexpression_mm9:363 |
Association with transcript: | 0bp_to_ENSMUST00000140976, uc008vcr.2_5end |
EntrezGene: | Wdtc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.14e-11 | 6 |
gut absorptive cell | 2.14e-11 | 6 |
enterocyte | 2.14e-11 | 6 |
columnar/cuboidal epithelial cell | 1.18e-09 | 7 |
intestinal epithelial cell | 2.49e-07 | 9 |
epithelial cell of alimentary canal | 2.49e-07 | 9 |
defensive cell | 3.40e-07 | 7 |
epithelial cell | 5.45e-07 | 25 |
bone marrow cell | 5.64e-07 | 3 |
mesenchymal stem cell of the bone marrow | 5.64e-07 | 3 |
endo-epithelial cell | 8.34e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 4.87e-11 | 15 |
organ component layer | 5.92e-11 | 24 |
intestine | 3.32e-10 | 31 |
intestinal mucosa | 2.61e-08 | 13 |
wall of intestine | 2.61e-08 | 13 |
gastrointestinal system mucosa | 2.61e-08 | 13 |
gastrointestinal system | 2.35e-07 | 47 |
epithelium of mucosa | 2.49e-07 | 9 |
gastrointestinal system epithelium | 2.49e-07 | 9 |
intestinal epithelium | 2.49e-07 | 9 |
extraembryonic membrane | 9.28e-07 | 3 |
extraembryonic structure | 9.28e-07 | 3 |
membranous layer | 9.28e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 7.75e-07 | 3 |
muscle cancer | 7.75e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.