FFCP PHASE1:Hg19::chr8:144911181..144911218,-: Difference between revisions
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{{FFCP | 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2.07377898544228,0,1.30165200803622,1.02256085710989,0.423387050190929,1.14553434272025,0.31020638566432,0,1.23040974977572,0.294450700845729,0.609589624911347,0,0.102662806856247,0,0.485710993059139,1.63757624423474,0,1.30812099855325,0.79062257427272,0.219881033490858,0.452888530700021,0.385870790539723,1.09279780251979,0.470317296361523,0,1.17838273550813,0.981542335574726,0.297046400327086,2.5359343655004,1.69927114687817,0,0.45120521581504,0.599646935549574,0.357107877211315,3.88184358887261,0.240724100067505,0,0.458729283404541,2.58011249672612,1.89325874631822,2.10773619591836,1.74540276136151,0,0.371995018166751,0.924351257262837,1.29787968637137,1.00933139868063,3.05943601498347,3.54755802832024,1.32585478664576,0.801652215796681,1.8378979906969,2.005660314339,1.43979526614655,2.41167717140561,0,1.75836092965222,0.213233981900981,0.952257725854961,0,0.248298857183432,2.13050538903166,0.381882949668989,0.404234377916439,0,0.684466602170562,0.336760265072938,0.0717222053926763,0,0.732629417498771,0.960546112899439,5.7921684686082,1.25755282949222,0,0.366724332548599,0,0,0.402547587182052,0.641136984606466|short_description=p3@PUF60}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=22827 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17042 | |||
|TSSclassifier=S | |||
|UniProt=Q9UHX1,E9PN18 | |||
|association_with_transcript=0bp_to_ENST00000313352,ENST00000453551,ENST00000529999,ENST00000531951,NM_001136033,uc003yzq.2,uc003yzr.2_5end | |||
|description=CAGE_peak_3_at_PUF60_5end | |||
|id=chr8:144911181..144911218,- | |||
|ontology_enrichment_celltype=CL:0000055!6.67e-25!180;CL:0002321!4.15e-22!248;CL:0000220!1.04e-21!246;CL:0000183!1.24e-13!59;CL:0000680!1.90e-13!57;CL:0000056!1.90e-13!57;CL:0000355!1.90e-13!57;CL:0000187!8.66e-13!54;CL:0000393!2.47e-12!60;CL:0000211!2.47e-12!60;CL:0000192!2.18e-11!42;CL:0000514!2.18e-11!42;CL:0000222!2.02e-10!119;CL:0000359!9.00e-10!32;CL:0000057!5.10e-09!75;CL:0000221!8.40e-08!71;CL:0000066!6.87e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.35e-09;32!CL:0000192;8.85e-08;43!CL:0000187;7.44e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.80e-18,250;CL:0000680,3.66e-14,58;CL:0000056,3.66e-14,58;CL:0000355,3.66e-14,58;CL:0000187,2.24e-13,55;CL:0000393,1.37e-12,61;CL:0000211,1.37e-12,61;CL:0000192,2.83e-11,43;CL:0000514,2.83e-11,43;CL:0000359,2.94e-10,32;CL:0000222,5.38e-09,121;CL:0000057,7.95e-08,76;CL:0000221,2.05e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000514;8.85e-08;43!CL:0000355;5.81e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.06e-19!365;UBERON:0000119!5.57e-17!312;UBERON:0000483!1.41e-16!309;UBERON:0000914!2.56e-15!83;UBERON:0002329!2.56e-15!83;UBERON:0003077!2.56e-15!83;UBERON:0003059!2.56e-15!83;UBERON:0007282!2.56e-15!83;UBERON:0009618!2.56e-15!83;UBERON:0007285!2.56e-15!83;UBERON:0000481!2.96e-15!347;UBERON:0000486!3.27e-14!82;UBERON:0004290!1.33e-13!70;UBERON:0005256!5.58e-12!143;UBERON:0001134!1.12e-10!61;UBERON:0002036!1.12e-10!61;UBERON:0003082!1.12e-10!61;UBERON:0000477!1.20e-10!286;UBERON:0004111!5.31e-10!241;UBERON:0002100!7.09e-10!216;UBERON:0002385!1.05e-09!63;UBERON:0001015!1.05e-09!63;UBERON:0000383!1.05e-09!63;UBERON:0000025!2.31e-09!194;UBERON:0003104!3.23e-09!238;UBERON:0009142!3.23e-09!238;UBERON:0004121!1.08e-07!169;UBERON:0000490!1.10e-07!138;UBERON:0000033!2.15e-07!123;UBERON:0000924!3.47e-07!173;UBERON:0006601!3.47e-07!173;UBERON:0002049!3.65e-07!79;UBERON:0007798!3.65e-07!79;UBERON:0001637!4.62e-07!42;UBERON:0003509!4.62e-07!42;UBERON:0004572!4.62e-07!42;UBERON:0003102!8.48e-07!95 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003077,2.07e-15,72;UBERON:0007285,2.07e-15,72;UBERON:0007524,2.27e-15,73;UBERON:0000119,2.66e-15,309;UBERON:0002329,4.44e-15,71;UBERON:0003059,4.44e-15,71;UBERON:0007282,4.44e-15,71;UBERON:0004290,4.44e-15,71;UBERON:0009618,4.44e-15,71;UBERON:0000483,5.70e-15,306;UBERON:0007503,8.03e-15,78;UBERON:0000486,2.72e-14,83;UBERON:0001134,4.72e-12,62;UBERON:0002036,4.72e-12,62;UBERON:0003082,4.72e-12,62;UBERON:0002385,4.04e-11,64;UBERON:0001015,4.04e-11,64;UBERON:0000383,4.04e-11,64;UBERON:0000490,3.72e-10,148;UBERON:0005256,1.47e-09,122;UBERON:0003104,2.56e-09,160;UBERON:0009142,2.56e-09,160;UBERON:0000025,1.00e-08,192;UBERON:0004111,2.45e-08,240;UBERON:0010314,2.78e-08,132;UBERON:0001637,4.99e-08,42;UBERON:0003509,4.99e-08,42;UBERON:0004572,4.99e-08,42;UBERON:0004872,3.09e-07,83;UBERON:0004121,8.73e-07,171;UBERON:0000924,8.73e-07,171;UBERON:0006601,8.73e-07,171 | |||
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| |||
|short_description=p3@PUF60 | |||
}} |
Revision as of 04:09, 14 September 2013
Short description: | p3@PUF60 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_PUF60_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000313352, ENST00000453551, ENST00000529999, ENST00000531951, NM_001136033, uc003yzq.2, uc003yzr.2_5end |
EntrezGene: | PUF60 |
HGNC: | 17042 |
UniProt: | Q9UHX1E9PN18 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.80e-18 | 250 |
muscle precursor cell | 3.66e-14 | 58 |
myoblast | 3.66e-14 | 58 |
multi-potent skeletal muscle stem cell | 3.66e-14 | 58 |
muscle cell | 2.24e-13 | 55 |
electrically responsive cell | 1.37e-12 | 61 |
electrically active cell | 1.37e-12 | 61 |
smooth muscle cell | 2.83e-11 | 43 |
smooth muscle myoblast | 2.83e-11 | 43 |
vascular associated smooth muscle cell | 2.94e-10 | 32 |
mesodermal cell | 5.38e-09 | 121 |
fibroblast | 7.95e-08 | 76 |
ectodermal cell | 2.05e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
paraxial mesoderm | 2.07e-15 | 72 |
presumptive paraxial mesoderm | 2.07e-15 | 72 |
dense mesenchyme tissue | 2.27e-15 | 73 |
cell layer | 2.66e-15 | 309 |
somite | 4.44e-15 | 71 |
presomitic mesoderm | 4.44e-15 | 71 |
presumptive segmental plate | 4.44e-15 | 71 |
dermomyotome | 4.44e-15 | 71 |
trunk paraxial mesoderm | 4.44e-15 | 71 |
epithelium | 5.70e-15 | 306 |
epithelial vesicle | 8.03e-15 | 78 |
multilaminar epithelium | 2.72e-14 | 83 |
skeletal muscle tissue | 4.72e-12 | 62 |
striated muscle tissue | 4.72e-12 | 62 |
myotome | 4.72e-12 | 62 |
muscle tissue | 4.04e-11 | 64 |
musculature | 4.04e-11 | 64 |
musculature of body | 4.04e-11 | 64 |
unilaminar epithelium | 3.72e-10 | 148 |
trunk mesenchyme | 1.47e-09 | 122 |
mesenchyme | 2.56e-09 | 160 |
entire embryonic mesenchyme | 2.56e-09 | 160 |
tube | 1.00e-08 | 192 |
anatomical conduit | 2.45e-08 | 240 |
structure with developmental contribution from neural crest | 2.78e-08 | 132 |
artery | 4.99e-08 | 42 |
arterial blood vessel | 4.99e-08 | 42 |
arterial system | 4.99e-08 | 42 |
splanchnic layer of lateral plate mesoderm | 3.09e-07 | 83 |
ectoderm-derived structure | 8.73e-07 | 171 |
ectoderm | 8.73e-07 | 171 |
presumptive ectoderm | 8.73e-07 | 171 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.