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FFCP PHASE1:Mm9::chr5:108216274..108216278,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=127|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:108216274..108216278,-|id=chr5:108216274..108216278,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002365!1.14e-11!25;UBERON:0002330!1.14e-11!25;UBERON:0009569!1.18e-11!66;UBERON:0005172!2.22e-11!49;UBERON:0005173!2.22e-11!49;UBERON:0002417!2.22e-11!49;UBERON:0000916!2.22e-11!49;UBERON:0002107!7.91e-11!22;UBERON:0007499!7.91e-11!22;UBERON:0006925!7.91e-11!22;UBERON:0009497!7.91e-11!22;UBERON:0000015!7.91e-11!22;UBERON:0002423!7.91e-11!22;UBERON:0006235!7.91e-11!22;UBERON:0008835!7.91e-11!22;UBERON:0003894!7.91e-11!22;UBERON:0004161!7.91e-11!22;UBERON:0008836!7.91e-11!22;UBERON:0003914!5.84e-10!47;UBERON:0009854!1.09e-09!23;UBERON:0009856!1.09e-09!23;UBERON:0000466!3.52e-09!79;UBERON:0005177!5.82e-07!85|ontology_enrichment_uberon_v019_2=UBERON:0002365,3.17e-17,25;UBERON:0002330,3.17e-17,25;UBERON:0002107,7.14e-17,22;UBERON:0007499,7.14e-17,22;UBERON:0006925,7.14e-17,22;UBERON:0009497,7.14e-17,22;UBERON:0000015,7.14e-17,22;UBERON:0002423,7.14e-17,22;UBERON:0006235,7.14e-17,22;UBERON:0008835,7.14e-17,22;UBERON:0003894,7.14e-17,22;UBERON:0004161,7.14e-17,22;UBERON:0008836,7.14e-17,22;UBERON:0009854,8.16e-16,23;UBERON:0009856,8.16e-16,23;UBERON:0005172,9.30e-16,49;UBERON:0005173,9.30e-16,49;UBERON:0002417,9.30e-16,49;UBERON:0000916,9.30e-16,49;UBERON:0003914,6.25e-13,47;UBERON:0009569,1.59e-12,66;UBERON:0005177,2.16e-09,79;UBERON:0005256,3.66e-09,45;UBERON:0003104,4.26e-09,61;UBERON:0009142,4.26e-09,61;UBERON:0002100,4.98e-08,90;UBERON:0001048,3.94e-07,134|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,1.33243904726265,2.63217847606774,4.19737126876888,0.315462165358238,0.411343300817216,0.42438965179803,0.765389611359628,0.0992909512008853,0,0,0,0,0,0.215471232685889,0.190023419456374,0,0.665191531965914,0,0,0,0.866554859253824,0.831173226792462,0.816677425049476,1.67412652294763,0,0.523523743973798,1.17646297606203,0.683045484958446,0.485510353031154,0.125896817975577,0.202753862439029,0.550640256485045,0,0,0,0,0,0,0.335565212115473,0,0,0,0,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0.311068836925433,0,0.210324961351382,0.285650984403804,0,0,0,0,0,0.510749352340751,0.153606533256243,0,0.0914876436024097,0,0,0,0,0,0.427115042397309,0.186399445825301,0.075726193333184,0.0755715601067855,0,1.72084775396277,0.679971333707751,1.61910957491345,1.29955283489534,2.24013443548668,0.140444420131752,0,0,0,0.704217098883403,0,0,0,0.432982082022428,0,0,1.48439043634778,1.55362730188303,0.593768556259299,0.173485326766136,0,1.61430848079241,0.753613202763113,1.29347577849275,0.125666591329675,1.23597483867187,0.144599356919912,0,0.323533699894818,2.20841518460394,2.42437626567611,0,0,1.67557365450764,0.255457055208591,0.239630249011841,0,0.889491589511453,0.149790639404823,0.457500602818626,0.125654352112864,0.695297280769106,0.767146371990992,0.20778804455956,0.811206315338788,0.611036183101898,1.24406970610093,0.505445516867349,0.420883711772948,0.130120442962704,0.229902104433473,0.180062129805349,0.452114453507145,0.748401490664606,1.0249097622788,1.12442069471675,0.517406741478031,0,0.189106080167819,0.175951124163949,0.219195732427575,0.556094498451196,0,0,1.19420560091096,0,0.257347907114715,0.284163499395593,0.621377317606506,1.64168241986767,0.900310307305074,1.42046841351126,1.37734962223183,1.07986979021165,0.697601834251224,1.07309360559848,0.817357396570186,2.30383789878873,1.31333971263276,0.729619285912702,1.16959989940266,1.09775057645525,0.268412837520744,0.630869845692382,0.205809224758569,0.660837565967596,0.528901133327089,0.853153002140936,0.928946687441754,0.38660238396628,1.61346819698674,0.444756087689741,0.190225626112559,0,0.494096864172033,1.00534083520108,0.994782360205754,1.36474860983384,0.898819408654221,0.432276099749388,1.1948476395262,0,1.14248512609729,0,0.407302655690628,0.581857461502877,0.561086559122548,1.3279672796094,2.06654207171443,1.72698600625512,0.740382983530803,2.07516838961004,1.16791574001266,1.76903095601883,4.04751802292737,3.85434230638156,4.3411888755435,3.56476192493988,1.72617682470486,3.89124544260085,4.66754402419738,15.814502718009,4.09355042435354,3.12037673114561,1.01031551178845,3.40855085691633,3.37710464954357,0.739012760666419,0.37898282354097,0.488894929326078,0.848725428875941,1.40814148973101,0.670025029767263,0.952174563544055,1.56106918286239,0.788175720530955,0.8858587585951,0.318909537314974,1.80249646187312,0.863424909329478,1.73578870297814,1.50791283939272,1.08781136763742,1.96705709207614,0.827810238914197,0.321101179975584,0.586058432961016,0.163934945376675,1.00988370881749,0.315508219416257,1.56175497718655,0.861693590931196,0.238968797952552,0.891194696329576,0.283076530788832,0.809621403349789,0.292255857911312,0,0.321321316421807,0.425820255624806,0.178065603667255,0.32577391870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|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=127
|UniProt=NA
|association_with_transcript=NA
|description=CAGE_peak_at_chr5:108216274..108216278,-
|id=chr5:108216274..108216278,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002365!1.14e-11!25;UBERON:0002330!1.14e-11!25;UBERON:0009569!1.18e-11!66;UBERON:0005172!2.22e-11!49;UBERON:0005173!2.22e-11!49;UBERON:0002417!2.22e-11!49;UBERON:0000916!2.22e-11!49;UBERON:0002107!7.91e-11!22;UBERON:0007499!7.91e-11!22;UBERON:0006925!7.91e-11!22;UBERON:0009497!7.91e-11!22;UBERON:0000015!7.91e-11!22;UBERON:0002423!7.91e-11!22;UBERON:0006235!7.91e-11!22;UBERON:0008835!7.91e-11!22;UBERON:0003894!7.91e-11!22;UBERON:0004161!7.91e-11!22;UBERON:0008836!7.91e-11!22;UBERON:0003914!5.84e-10!47;UBERON:0009854!1.09e-09!23;UBERON:0009856!1.09e-09!23;UBERON:0000466!3.52e-09!79;UBERON:0005177!5.82e-07!85
|ontology_enrichment_uberon_v019_2=UBERON:0002365,3.17e-17,25;UBERON:0002330,3.17e-17,25;UBERON:0002107,7.14e-17,22;UBERON:0007499,7.14e-17,22;UBERON:0006925,7.14e-17,22;UBERON:0009497,7.14e-17,22;UBERON:0000015,7.14e-17,22;UBERON:0002423,7.14e-17,22;UBERON:0006235,7.14e-17,22;UBERON:0008835,7.14e-17,22;UBERON:0003894,7.14e-17,22;UBERON:0004161,7.14e-17,22;UBERON:0008836,7.14e-17,22;UBERON:0009854,8.16e-16,23;UBERON:0009856,8.16e-16,23;UBERON:0005172,9.30e-16,49;UBERON:0005173,9.30e-16,49;UBERON:0002417,9.30e-16,49;UBERON:0000916,9.30e-16,49;UBERON:0003914,6.25e-13,47;UBERON:0009569,1.59e-12,66;UBERON:0005177,2.16e-09,79;UBERON:0005256,3.66e-09,45;UBERON:0003104,4.26e-09,61;UBERON:0009142,4.26e-09,61;UBERON:0002100,4.98e-08,90;UBERON:0001048,3.94e-07,134
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,1.33243904726265,2.63217847606774,4.19737126876888,0.315462165358238,0.411343300817216,0.42438965179803,0.765389611359628,0.0992909512008853,0,0,0,0,0,0.215471232685889,0.190023419456374,0,0.665191531965914,0,0,0,0.866554859253824,0.831173226792462,0.816677425049476,1.67412652294763,0,0.523523743973798,1.17646297606203,0.683045484958446,0.485510353031154,0.125896817975577,0.202753862439029,0.550640256485045,0,0,0,0,0,0,0.335565212115473,0,0,0,0,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0.311068836925433,0,0.210324961351382,0.285650984403804,0,0,0,0,0,0.510749352340751,0.153606533256243,0,0.0914876436024097,0,0,0,0,0,0.427115042397309,0.186399445825301,0.075726193333184,0.0755715601067855,0,1.72084775396277,0.679971333707751,1.61910957491345,1.29955283489534,2.24013443548668,0.140444420131752,0,0,0,0.704217098883403,0,0,0,0.432982082022428,0,0,1.48439043634778,1.55362730188303,0.593768556259299,0.173485326766136,0,1.61430848079241,0.753613202763113,1.29347577849275,0.125666591329675,1.23597483867187,0.144599356919912,0,0.323533699894818,2.20841518460394,2.42437626567611,0,0,1.67557365450764,0.255457055208591,0.239630249011841,0,0.889491589511453,0.149790639404823,0.457500602818626,0.125654352112864,0.695297280769106,0.767146371990992,0.20778804455956,0.811206315338788,0.611036183101898,1.24406970610093,0.505445516867349,0.420883711772948,0.130120442962704,0.229902104433473,0.180062129805349,0.452114453507145,0.748401490664606,1.0249097622788,1.12442069471675,0.517406741478031,0,0.189106080167819,0.175951124163949,0.219195732427575,0.556094498451196,0,0,1.19420560091096,0,0.257347907114715,0.284163499395593,0.621377317606506,1.64168241986767,0.900310307305074,1.42046841351126,1.37734962223183,1.07986979021165,0.697601834251224,1.07309360559848,0.817357396570186,2.30383789878873,1.31333971263276,0.729619285912702,1.16959989940266,1.09775057645525,0.268412837520744,0.630869845692382,0.205809224758569,0.660837565967596,0.528901133327089,0.853153002140936,0.928946687441754,0.38660238396628,1.61346819698674,0.444756087689741,0.190225626112559,0,0.494096864172033,1.00534083520108,0.994782360205754,1.36474860983384,0.898819408654221,0.432276099749388,1.1948476395262,0,1.14248512609729,0,0.407302655690628,0.581857461502877,0.561086559122548,1.3279672796094,2.06654207171443,1.72698600625512,0.740382983530803,2.07516838961004,1.16791574001266,1.76903095601883,4.04751802292737,3.85434230638156,4.3411888755435,3.56476192493988,1.72617682470486,3.89124544260085,4.66754402419738,15.814502718009,4.09355042435354,3.12037673114561,1.01031551178845,3.40855085691633,3.37710464954357,0.739012760666419,0.37898282354097,0.488894929326078,0.848725428875941,1.40814148973101,0.670025029767263,0.952174563544055,1.56106918286239,0.788175720530955,0.8858587585951,0.318909537314974,1.80249646187312,0.863424909329478,1.73578870297814,1.50791283939272,1.08781136763742,1.96705709207614,0.827810238914197,0.321101179975584,0.586058432961016,0.163934945376675,1.00988370881749,0.315508219416257,1.56175497718655,0.861693590931196,0.238968797952552,0.891194696329576,0.283076530788832,0.809621403349789,0.292255857911312,0,0.321321316421807,0.425820255624806,0.178065603667255,0.325773918707152,0.989820737835213,0,0.242780636154981,0,0.377210159511796,0,0.614870295887855,0.516856586336442,0.727067458955011,2.13898427030833,0.948110273807448,0,0,0,0.18006109403131,0.258717367565509,0.214337035031592,0.709360934569094,0.356737635204141,0.987294123612726,0,0.704015124191131,1.27099242518292,0.661585194164886,0.8244312647074,1.61464426695906,0.844380948994182,0.716234064018819,1.14898629821543,0.582961673259701,0,1.36696704638282,0.82554747185289,1.85194527369712,10.9253705062721,6.97140561377228,6.17701067657611,0.169978429993855,0.139951452323658,0.138199973804424,0.954670618015114,0.158167996790568,0.609958401380546,0.648032044930808,0.836353184057875,0.655087691238533,1.21377911746339,1.40510874733071,0.523511883968059,1.03691978633434,1.24267862617385,0.56369293868419,1.34564891439581,0.66183396182839,0.194451188344048,0.645799117388655,1.18269287843545,1.05621514781179,0.39061315453185,0.838874755405687,1.20792060413003,0.576060012515731,0,0.202725215290164,0.410843828659309,0.129920822977795,0,0.198681354781265,0.480781798079875,0.443068581523732,0,0.304827226619999,0.100826185136841,0.0974578807397524,0.0962118416403295,0.233753804363138,0.226730383615211,0,0.269141569828427,0,0.19318959403219,1.12609485270709,0.183151624267265,0,1.00314420807073,0,0.460325236507177,0.572895513439397,2.23409137046794,0,0.755393897389701,0,0,0.906284817968409,0.51776031175182,0.31136204275253,1.59609949360412,0.682934423016537,2.43106717068294,0.209613162627982,0,0.666740183404846,0.824140228955577,1.28367683836726,1.76888048234658,0.760437899670719,0.943131706930381,0.842773567228942,1.34452820050225,0.918967503289812,0,1.27472758539341,1.15745532278223,0.824171801606613,1.03039244094078,1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|short_description=p@chr5:108216274..108216278,-
}}

Revision as of 05:52, 14 September 2013

Short description:p@chr5:108216274..108216278, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr5:108216274..108216278, -
Coexpression cluster:MCL_coexpression_mm9:127
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p@chr5:108216274..108216278-

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.63
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.20
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.48
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A62.21
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.89
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.24
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.75
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I22.30
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G10.73
heart, neonate N20.CNhs11127.821-26I61.17
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D51.33
kidney, neonate N20.CNhs11113.832-19I12.07
kidney, neonate N25.CNhs11122.1353-25F31.73
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B22.08
liver, embryo E12.CNhs10601.355-15F81.17
liver, embryo E13.CNhs10524.378-3H61.77
liver, embryo E14.CNhs10594.409-16E14.05
liver, embryo E15.CNhs10520.433-16D73.85
liver, embryo E16.CNhs10523.462-17F54.34
liver, embryo E17.CNhs10510.481-18A33.56
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F43.89
liver, neonate N03.CNhs11123.1345-25G24.67
liver, neonate N06.CNhs11101.684-20A815.81
liver, neonate N07.CNhs11103.716-20H24.09
liver, neonate N10.CNhs11115.751-24B93.12
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H13.41
liver, neonate N30.CNhs11106.1382-42D13.38
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A41.80
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H21.74
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G31.27
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G41.61
skin, neonate N03.CNhs11215.662-22H30.84
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G21.37
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F21.85
spleen, neonate N10.CNhs11116.752-24D110.93
spleen, neonate N20.CNhs11112.824-19H16.97
spleen, neonate N25.CNhs11099.1354-25G36.18
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A91.41
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I11.04
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F51.35
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.34
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
exocrine gland3.17e-1725
exocrine system3.17e-1725
liver7.14e-1722
epithelial sac7.14e-1722
digestive gland7.14e-1722
epithelium of foregut-midgut junction7.14e-1722
anatomical boundary7.14e-1722
hepatobiliary system7.14e-1722
foregut-midgut junction7.14e-1722
hepatic diverticulum7.14e-1722
liver primordium7.14e-1722
septum transversum7.14e-1722
liver bud7.14e-1722
digestive tract diverticulum8.16e-1623
sac8.16e-1623
abdomen element9.30e-1649
abdominal segment element9.30e-1649
abdominal segment of trunk9.30e-1649
abdomen9.30e-1649
epithelial tube6.25e-1347
subdivision of trunk1.59e-1266
trunk region element2.16e-0979
trunk mesenchyme3.66e-0945
mesenchyme4.26e-0961
entire embryonic mesenchyme4.26e-0961
trunk4.98e-0890
primordium3.94e-07134







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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