FFCP PHASE1:Hg19::chr9:102584241..102584261,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8013|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7982|TSSclassifier=S|UniProt=E9PBS2|association_with_transcript=86bp_to_ENST00000395096_5end|coexpression_cluster_id=C1466|description=CAGE_peak_4_at_NR4A3_5end|id=chr9:102584241..102584261,+|ontology_enrichment_celltype=CL:0000766!1.90e-21!76;CL:0000860!1.23e-19!45;CL:0002057!4.13e-19!42;CL:0000557!2.29e-18!71;CL:0000738!3.07e-17!140;CL:0002009!1.86e-16!65;CL:0000839!2.69e-15!70;CL:0002194!2.81e-15!63;CL:0000576!2.81e-15!63;CL:0000040!2.81e-15!63;CL:0000559!2.81e-15!63;CL:0002031!4.98e-10!124;CL:0002087!7.16e-10!119;CL:0000763!2.30e-09!112;CL:0000049!2.30e-09!112;CL:0000451!3.01e-08!10;CL:0000037!5.59e-08!172;CL:0000566!5.59e-08!172;CL:0000990!4.44e-07!8;CL:0000094!6.14e-07!8|ontology_enrichment_celltype_v019=CL:0000860;1.04e-14;33!CL:0002057;1.04e-14;33!CL:0000473;4.73e-12;39!CL:0000234;4.73e-12;39!CL:0000766;5.37e-11;69!CL:0000576;4.31e-10;48!CL:0000451;9.60e-10;10!CL:0000990;2.62e-08;8!CL:0000094;3.80e-08;8|ontology_enrichment_celltype_v019_2=CL:0000766,1.13e-24,72;CL:0000738,6.91e-22,136;CL:0000860,4.39e-21,42;CL:0002057,4.39e-21,42;CL:0000557,6.41e-21,67;CL:0000473,5.05e-20,48;CL:0000234,5.05e-20,48;CL:0002009,2.36e-18,61;CL:0000839,1.17e-17,66;CL:0002194,6.31e-17,59;CL:0000576,6.31e-17,59;CL:0000040,6.31e-17,59;CL:0000559,6.31e-17,59;CL:0000763,1.85e-13,108;CL:0000049,1.85e-13,108;CL:0002031,4.16e-13,120;CL:0000037,1.13e-12,168;CL:0002087,2.86e-12,115;CL:0000988,7.80e-11,177;CL:0002032,1.21e-10,161;CL:0000837,1.21e-10,161;CL:0000451,9.92e-10,10;CL:0000990,2.64e-08,8;CL:0000094,3.91e-08,8|ontology_enrichment_development_v019=CL:0002057;3.23e-15;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!7.25e-16!80;UBERON:0002390!1.32e-15!102;UBERON:0003061!1.32e-15!102;UBERON:0001474!2.89e-15!86;UBERON:0004765!1.38e-14!101;UBERON:0001434!1.38e-14!101;UBERON:0007023!1.86e-13!115;UBERON:0002193!1.10e-11!112;UBERON:0002405!5.04e-08!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.24e-19,76;UBERON:0001474,3.49e-18,82;UBERON:0002390,6.59e-17,98;UBERON:0003061,6.59e-17,98;UBERON:0001434,4.84e-16,100;UBERON:0004765,1.63e-15,90;UBERON:0002405,7.18e-14,93;UBERON:0002193,4.72e-13,108;UBERON:0007023,1.99e-10,114|phase1_expression=0.54503513781167,0.856402095563933,1.40954404095971,1.0007329835313,1.78784437770915,0,2.53299878168311,0,0.522371256399677,0,0,0,0,1.36142988256051,1.32558950291166,0.672325146451775,1.20538905604795,0,0,0,0,0,0,0,0.125542639594803,0.305653622991805,0.656804715599566,0.0787107813136792,73.1657554938961,24.5650814782216,28.9506150601062,0,0,0,0,0,2.64240395401362,23.8218025668707,49.1333896301847,21.2670653301535,0,0,0,0.872389432677388,0.377875943688809,0.970336244751265,14.6430293250581,18.0913870729603,17.962969511916,11.507695692886,8.19714260893122,5.67557351732605,77.5677781657392,66.4849224091341,36.5651513804723,17.5065375774622,8.46009065179322,10.7867272533641,96.4164260968343,68.3578827672079,79.2778035990811,2.30895910130701,1.59570926097305,1.27867425159808,23.7971575675439,20.9932533135722,24.912889959823,15.8286659111748,9.90817544998383,8.25317609879443,19.3727840842678,26.1477121551171,12.9749578850763,8.45021145247767,12.5436536979376,5.45112478321777,17.5232664588532,7.35866774923381,6.26829788118613,7.41033133727246,4.57508357557907,1.82664153764634,0,0,0,0,0,0,0,0,10.8150464130795,38.170417309111,27.1413991968912,43.6165384310785,33.0700052159106,0.526768169550154,31.0801436779856,46.7682807671506,62.7084571948503,0,12.71096839871,8.5220605032252,1.94826728407911,0.334231370655521,18.5601721709147,7.3106185212595,8.6657236404805,0,0.390178042679635,0.164437904603676,0.552700035571697,0.289803085735052,9.63862660553393,2.67540828089713,10.4535523804977,0,13.7959377696692,11.3397057009268,10.1207876807801,0,0,0,0.150575119077773,0,0,0.473554504088034,0,42.7406295636433,61.2438048344232,30.992422430919,2.43806866313962,0,0.511450247374121,0.361439152384566,0.50133791063589,4.77993512570718,0,1.94653948121054,0.189069634328136,0.221729397462564,0.702678285545008,1.44076983047484,0,0,24.0165071304466,22.1144766370069,7.97747763113191,35.5351030214959,21.1638116988647,24.1447375864217,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,117.284571518096,151.234303017847,0,1.98788780678127,0.25326102332916,1.32409180813219,5.73673241497627,1.06400514659507,0,0,0,0,0,0,0.151357427644931,0.576175924479999,0.234321431833797,0,0,0.896692083310806,0.117434498643765,0.161872944368132,0,2.65400422631361,3.80786383666481,4.95963749643674,2.37600571456411,7.17074094907815,0,0,1.34668891163253,2.25213335769535,1.93944880838928,0,0.919463387397059,10.5166641234618,0.680593098960126,3.58779271377724,0.85422955527427,2.11931901159562,0.600182192168805,0.206105058476878,3.09168648054755,0,0.843881661206331,0.292311015483596,2.7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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8013 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7982 | |||
|TSSclassifier=S | |||
|UniProt=E9PBS2 | |||
|association_with_transcript=86bp_to_ENST00000395096_5end | |||
|coexpression_cluster_id=C1466 | |||
|description=CAGE_peak_4_at_NR4A3_5end | |||
|id=chr9:102584241..102584261,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.90e-21!76;CL:0000860!1.23e-19!45;CL:0002057!4.13e-19!42;CL:0000557!2.29e-18!71;CL:0000738!3.07e-17!140;CL:0002009!1.86e-16!65;CL:0000839!2.69e-15!70;CL:0002194!2.81e-15!63;CL:0000576!2.81e-15!63;CL:0000040!2.81e-15!63;CL:0000559!2.81e-15!63;CL:0002031!4.98e-10!124;CL:0002087!7.16e-10!119;CL:0000763!2.30e-09!112;CL:0000049!2.30e-09!112;CL:0000451!3.01e-08!10;CL:0000037!5.59e-08!172;CL:0000566!5.59e-08!172;CL:0000990!4.44e-07!8;CL:0000094!6.14e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.04e-14;33!CL:0002057;1.04e-14;33!CL:0000473;4.73e-12;39!CL:0000234;4.73e-12;39!CL:0000766;5.37e-11;69!CL:0000576;4.31e-10;48!CL:0000451;9.60e-10;10!CL:0000990;2.62e-08;8!CL:0000094;3.80e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.13e-24,72;CL:0000738,6.91e-22,136;CL:0000860,4.39e-21,42;CL:0002057,4.39e-21,42;CL:0000557,6.41e-21,67;CL:0000473,5.05e-20,48;CL:0000234,5.05e-20,48;CL:0002009,2.36e-18,61;CL:0000839,1.17e-17,66;CL:0002194,6.31e-17,59;CL:0000576,6.31e-17,59;CL:0000040,6.31e-17,59;CL:0000559,6.31e-17,59;CL:0000763,1.85e-13,108;CL:0000049,1.85e-13,108;CL:0002031,4.16e-13,120;CL:0000037,1.13e-12,168;CL:0002087,2.86e-12,115;CL:0000988,7.80e-11,177;CL:0002032,1.21e-10,161;CL:0000837,1.21e-10,161;CL:0000451,9.92e-10,10;CL:0000990,2.64e-08,8;CL:0000094,3.91e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;3.23e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.25e-16!80;UBERON:0002390!1.32e-15!102;UBERON:0003061!1.32e-15!102;UBERON:0001474!2.89e-15!86;UBERON:0004765!1.38e-14!101;UBERON:0001434!1.38e-14!101;UBERON:0007023!1.86e-13!115;UBERON:0002193!1.10e-11!112;UBERON:0002405!5.04e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.24e-19,76;UBERON:0001474,3.49e-18,82;UBERON:0002390,6.59e-17,98;UBERON:0003061,6.59e-17,98;UBERON:0001434,4.84e-16,100;UBERON:0004765,1.63e-15,90;UBERON:0002405,7.18e-14,93;UBERON:0002193,4.72e-13,108;UBERON:0007023,1.99e-10,114 | |||
|phase1_expression=0.54503513781167,0.856402095563933,1.40954404095971,1.0007329835313,1.78784437770915,0,2.53299878168311,0,0.522371256399677,0,0,0,0,1.36142988256051,1.32558950291166,0.672325146451775,1.20538905604795,0,0,0,0,0,0,0,0.125542639594803,0.305653622991805,0.656804715599566,0.0787107813136792,73.1657554938961,24.5650814782216,28.9506150601062,0,0,0,0,0,2.64240395401362,23.8218025668707,49.1333896301847,21.2670653301535,0,0,0,0.872389432677388,0.377875943688809,0.970336244751265,14.6430293250581,18.0913870729603,17.962969511916,11.507695692886,8.19714260893122,5.67557351732605,77.5677781657392,66.4849224091341,36.5651513804723,17.5065375774622,8.46009065179322,10.7867272533641,96.4164260968343,68.3578827672079,79.2778035990811,2.30895910130701,1.59570926097305,1.27867425159808,23.7971575675439,20.9932533135722,24.912889959823,15.8286659111748,9.90817544998383,8.25317609879443,19.3727840842678,26.1477121551171,12.9749578850763,8.45021145247767,12.5436536979376,5.45112478321777,17.5232664588532,7.35866774923381,6.26829788118613,7.41033133727246,4.57508357557907,1.82664153764634,0,0,0,0,0,0,0,0,10.8150464130795,38.170417309111,27.1413991968912,43.6165384310785,33.0700052159106,0.526768169550154,31.0801436779856,46.7682807671506,62.7084571948503,0,12.71096839871,8.5220605032252,1.94826728407911,0.334231370655521,18.5601721709147,7.3106185212595,8.6657236404805,0,0.390178042679635,0.164437904603676,0.552700035571697,0.289803085735052,9.63862660553393,2.67540828089713,10.4535523804977,0,13.7959377696692,11.3397057009268,10.1207876807801,0,0,0,0.150575119077773,0,0,0.473554504088034,0,42.7406295636433,61.2438048344232,30.992422430919,2.43806866313962,0,0.511450247374121,0.361439152384566,0.50133791063589,4.77993512570718,0,1.94653948121054,0.189069634328136,0.221729397462564,0.702678285545008,1.44076983047484,0,0,24.0165071304466,22.1144766370069,7.97747763113191,35.5351030214959,21.1638116988647,24.1447375864217,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,117.284571518096,151.234303017847,0,1.98788780678127,0.25326102332916,1.32409180813219,5.73673241497627,1.06400514659507,0,0,0,0,0,0,0.151357427644931,0.576175924479999,0.234321431833797,0,0,0.896692083310806,0.117434498643765,0.161872944368132,0,2.65400422631361,3.80786383666481,4.95963749643674,2.37600571456411,7.17074094907815,0,0,1.34668891163253,2.25213335769535,1.93944880838928,0,0.919463387397059,10.5166641234618,0.680593098960126,3.58779271377724,0.85422955527427,2.11931901159562,0.600182192168805,0.206105058476878,3.09168648054755,0,0.843881661206331,0.292311015483596,2.77677151668526,0.920498986422993,0.969876340912871,6.03516307278244,0,0.339121184620975,0,0,0,0.121973706129595,0,0.116193942869518,0.414644220061482,0.252320850875628,0,0,0,0,2.78620756819187,0,0.946454400318751,2.36018566109342,0.964044119533928,1.98529150918309,1.96091499683166,2.13543557199987,2.69662616320329,2.74710051175484,2.30848294167834,0,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0.651616610620649,2.07986957055916,0,0,0.234817388471643,0,0.462985512576611,0,0,0,0.246217006087397,2.10603838625314,0.445893486866185,0,0,0,0.0895585227028483,0,0,110.849228526587,0,24.4647176338111,19.4561937112898,14.7703647108865,11.1121315011296,11.8416411923066,5.86087236050235,3.4214489204541,4.31875469353959,9.61097785100536,8.57479297891735,0.112131084345361,0,0,0.517086863031111,0,0,0,0,0,0,0,2.7165818795048,0,0,0.325736184293735,3.909311436168,0,0.301439377059586,0.871533458600294,0.299918973546171,2.43247561282381,2.00902836572851,2.10833939483032,0.718874566474748,0,0,0.144781306667579,0,0,0.112085143993527,26.5991526272602,37.7348256004155,20.40654276848,0.254094624222463,5.20559415430487,3.09315525111078,2.17771144934653,1.27587750330633,47.9364495326197,44.8742188806037,65.8920666363296,0.613457458595699,0,0,2.9115920614313,3.7470087647404,2.68094105557689,1.40569697991256,0,0,0,0,0.553107505625109,0.0868836144680828,0,0,19.6429624816743,30.6314165162436,43.6515711416087,0,0,0,1.73675465473144,1.38115775959256,0,0.512556597022804,0,0.321707842287215,1.48418066444991,0,0,0.657017248110473,0,1.04589340613963,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23649213977267,0.183138929636687,0.082509499920588,0.574265537996172,0,0,0.096670718292122,0.308097234229289,0.767518373630648,0.137836572484531,0,0.145016693914229,0.426133137080504,0.356128142586949,0,0,0,0.10115778085555,0,5.03699754929024,0.6970372701606,0.308033580176089,0,0,0.74129687641568,0.143124886741991,0,0.316379424718726,0,0,1.28381696410176,0.636406495851874,0,0,0,0,0.202182481573316,0,0.842516912477962,0,0.731140468893853,4.22600587027022,0.409499734223957,0.141405431953713,0,0,1.32687795048244,1.31535265576129,0,3.9353685122798,0,0.92947049429925,0,1.72093622644862,0,0,0,6.96655196482292,3.29294892959902,2.27683904259429,1.74967360122491,0,1.34060455107157,0,2.07116361708914,0,0,0,0,1.01489521846434,0.764637207142375,1.13929437434833,0.71469532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| |||
|short_description=p4@NR4A3 | |||
}} |
Revision as of 06:40, 14 September 2013
Short description: | p4@NR4A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_NR4A3_5end |
Coexpression cluster: | C1466_immature_Mast_CD14_Eosinophils_CD8_CD4_Basophils |
Association with transcript: | 86bp_to_ENST00000395096_5end |
EntrezGene: | NR4A3 |
HGNC: | 7982 |
UniProt: | E9PBS2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.13e-24 | 72 |
leukocyte | 6.91e-22 | 136 |
classical monocyte | 4.39e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.39e-21 | 42 |
granulocyte monocyte progenitor cell | 6.41e-21 | 67 |
defensive cell | 5.05e-20 | 48 |
phagocyte | 5.05e-20 | 48 |
macrophage dendritic cell progenitor | 2.36e-18 | 61 |
myeloid lineage restricted progenitor cell | 1.17e-17 | 66 |
monopoietic cell | 6.31e-17 | 59 |
monocyte | 6.31e-17 | 59 |
monoblast | 6.31e-17 | 59 |
promonocyte | 6.31e-17 | 59 |
myeloid cell | 1.85e-13 | 108 |
common myeloid progenitor | 1.85e-13 | 108 |
hematopoietic lineage restricted progenitor cell | 4.16e-13 | 120 |
hematopoietic stem cell | 1.13e-12 | 168 |
nongranular leukocyte | 2.86e-12 | 115 |
hematopoietic cell | 7.80e-11 | 177 |
hematopoietic oligopotent progenitor cell | 1.21e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.21e-10 | 161 |
dendritic cell | 9.92e-10 | 10 |
conventional dendritic cell | 2.64e-08 | 8 |
granulocyte | 3.91e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.24e-19 | 76 |
bone element | 3.49e-18 | 82 |
hematopoietic system | 6.59e-17 | 98 |
blood island | 6.59e-17 | 98 |
skeletal system | 4.84e-16 | 100 |
skeletal element | 1.63e-15 | 90 |
immune system | 7.18e-14 | 93 |
hemolymphoid system | 4.72e-13 | 108 |
adult organism | 1.99e-10 | 114 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.