FFCP PHASE1:Hg19::chr9:124088975..124088996,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2934|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4620|TSSclassifier=S|UniProt=Q5T0H7|association_with_transcript=-13bp_to_ENST00000373805_5end|description=CAGE_peak_13_at_GSN_5end|id=chr9:124088975..124088996,+|ontology_enrichment_celltype=CL:0000136!4.97e-09!15;CL:0002334!1.16e-08!12;CL:0005020!2.69e-07!6;CL:0002138!2.69e-07!6;CL:0005022!2.69e-07!6;CL:0002139!7.55e-07!24|ontology_enrichment_celltype_v019=CL:0002144;2.66e-12;3!CL:0000136;5.51e-07;13!CL:0002138;9.57e-07;6|ontology_enrichment_celltype_v019_2=CL:0002144,3.50e-12,3;CL:0000136,2.99e-08,15;CL:0005020,9.95e-07,6;CL:0002138,9.95e-07,6;CL:0005022,9.95e-07,6|ontology_enrichment_development_v019=UBERON:0008947;2.39e-20;29!CL:0005022;9.57e-07;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.86e-21!115;UBERON:0000477!6.37e-14!286;UBERON:0001737!3.77e-12!9;UBERON:0004111!2.84e-10!241;UBERON:0000468!2.28e-09!659;UBERON:0000064!6.38e-09!219;UBERON:0001049!1.04e-08!57;UBERON:0005068!1.04e-08!57;UBERON:0006241!1.04e-08!57;UBERON:0007135!1.04e-08!57;UBERON:0000467!5.84e-08!625;UBERON:0000480!7.06e-08!626;UBERON:0000025!8.92e-08!194;UBERON:0003124!1.54e-07!7;UBERON:0005631!1.79e-07!14;UBERON:0000158!1.79e-07!14;UBERON:0001557!2.31e-07!19;UBERON:0004923!3.12e-07!57;UBERON:0004457!8.64e-07!12;UBERON:0000042!8.64e-07!12;UBERON:0002298!9.82e-07!8|ontology_enrichment_uberon_v019=UBERON:0001737;7.42e-36;9!UBERON:0001557;7.42e-36;9!UBERON:0010523;2.66e-12;3!UBERON:0001915;2.66e-12;3!UBERON:0001982;2.66e-12;3!UBERON:0000065;7.95e-11;44!UBERON:0000072;6.17e-10;37!UBERON:0005406;1.46e-08;2!UBERON:0003127;1.77e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0001737,7.34e-36,9;UBERON:0001557,4.80e-16,19;UBERON:0008947,6.68e-15,38;UBERON:0003258,6.68e-15,38;UBERON:0010523,3.50e-12,3;UBERON:0001915,3.50e-12,3;UBERON:0001982,3.50e-12,3;UBERON:0000065,1.28e-09,54;UBERON:0001041,3.21e-09,87;UBERON:0003127,1.21e-08,2;UBERON:0005406,1.35e-08,2;UBERON:0000072,3.47e-08,47;UBERON:0001004,2.31e-07,74|phase1_expression=0.54503513781167,1.2846031433459,1.26858963686374,0,0.893922188854576,3.48935409640147,2.53299878168311,0.631719873426831,0.522371256399677,0,0,0.655324116390517,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0.579386075843295,0,0.486634870302636,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0.275118041940067,0,0.258416759169329,0.71153252537342,0.66944122552934,1.20848795132744,3.80136052859256,5.12530320851156,0.367663080345869,0,0.17859945656816,0,0.225222960966644,0,0,0,0,0,0.872188104285069,0,1.2663051166458,0,0.860509862246441,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0.619954687054593,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0.18611685633159,0,0.194874010322397,0,0.0920498986422993,0.161646056818812,0,0,0.169560592310488,0,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,8.51808960286876,8.26064981382698,4.57920956778616,7.83087206399997,7.40790109914181,4.50814176311084,8.76403503041069,6.67152981426177,5.00171304030308,0.738155454624648,0,0,0,2.53510069643662,8.84544495009863,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,6.0633908059651,7.40776820122577,6.27838702374174,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909382714338778,4.99306318531491,0.604780586659361,1.73675465473144,0.306923946576125,1.40330047216537,0.896974044789907,0.511707249066704,0.965123526861645,1.48418066444991,0.154209693802656,0.177561725313127,0.164254312027618,0.519254429183621,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0.170093705276516,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,2.36994326789761,0,0,0,0,0,0,0.308097234229289,0.15350367472613,0,0,0.580066775656914,0.0852266274161009,0,0,0,0,0,0,0,1.3940745403212,0,0,0,0.55597265731176,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0,1.32687795048244,0,0,0,0,0,0,0,0,0,0,3.58882980006029,2.96365403663912,0,0,0.0962221127255121,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0.23874448473769,0.890894042497916,0.307160702099232,0,0.140669416410513,0,0,0,0.796991953004279,0,0,0,0,0,0,0,0,0.690503839458535,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.241192877250816,0,0,0.295547618953547,0.658156191461918,10.0223386437471,0,0.230850775511391,0,0,0,0,0.31900115973192,0.366390373607449,0.533034776018635,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2934 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4620 | |||
|TSSclassifier=S | |||
|UniProt=Q5T0H7 | |||
|association_with_transcript=-13bp_to_ENST00000373805_5end | |||
|description=CAGE_peak_13_at_GSN_5end | |||
|id=chr9:124088975..124088996,+ | |||
|ontology_enrichment_celltype=CL:0000136!4.97e-09!15;CL:0002334!1.16e-08!12;CL:0005020!2.69e-07!6;CL:0002138!2.69e-07!6;CL:0005022!2.69e-07!6;CL:0002139!7.55e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0002144;2.66e-12;3!CL:0000136;5.51e-07;13!CL:0002138;9.57e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,3.50e-12,3;CL:0000136,2.99e-08,15;CL:0005020,9.95e-07,6;CL:0002138,9.95e-07,6;CL:0005022,9.95e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.39e-20;29!CL:0005022;9.57e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.86e-21!115;UBERON:0000477!6.37e-14!286;UBERON:0001737!3.77e-12!9;UBERON:0004111!2.84e-10!241;UBERON:0000468!2.28e-09!659;UBERON:0000064!6.38e-09!219;UBERON:0001049!1.04e-08!57;UBERON:0005068!1.04e-08!57;UBERON:0006241!1.04e-08!57;UBERON:0007135!1.04e-08!57;UBERON:0000467!5.84e-08!625;UBERON:0000480!7.06e-08!626;UBERON:0000025!8.92e-08!194;UBERON:0003124!1.54e-07!7;UBERON:0005631!1.79e-07!14;UBERON:0000158!1.79e-07!14;UBERON:0001557!2.31e-07!19;UBERON:0004923!3.12e-07!57;UBERON:0004457!8.64e-07!12;UBERON:0000042!8.64e-07!12;UBERON:0002298!9.82e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.42e-36;9!UBERON:0001557;7.42e-36;9!UBERON:0010523;2.66e-12;3!UBERON:0001915;2.66e-12;3!UBERON:0001982;2.66e-12;3!UBERON:0000065;7.95e-11;44!UBERON:0000072;6.17e-10;37!UBERON:0005406;1.46e-08;2!UBERON:0003127;1.77e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,7.34e-36,9;UBERON:0001557,4.80e-16,19;UBERON:0008947,6.68e-15,38;UBERON:0003258,6.68e-15,38;UBERON:0010523,3.50e-12,3;UBERON:0001915,3.50e-12,3;UBERON:0001982,3.50e-12,3;UBERON:0000065,1.28e-09,54;UBERON:0001041,3.21e-09,87;UBERON:0003127,1.21e-08,2;UBERON:0005406,1.35e-08,2;UBERON:0000072,3.47e-08,47;UBERON:0001004,2.31e-07,74 | |||
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| |||
|short_description=p13@GSN | |||
}} |
Revision as of 07:17, 14 September 2013
Short description: | p13@GSN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_GSN_5end |
Coexpression cluster: | NA |
Association with transcript: | -13bp_to_ENST00000373805_5end |
EntrezGene: | GSN |
HGNC: | 4620 |
UniProt: | Q5T0H7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 3.50e-12 | 3 |
fat cell | 2.99e-08 | 15 |
lymphangioblast | 9.95e-07 | 6 |
endothelial cell of lymphatic vessel | 9.95e-07 | 6 |
vascular lymphangioblast | 9.95e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
larynx | 7.34e-36 | 9 |
upper respiratory tract | 4.80e-16 | 19 |
respiratory primordium | 6.68e-15 | 38 |
endoderm of foregut | 6.68e-15 | 38 |
microcirculatory vessel | 3.50e-12 | 3 |
endothelium of capillary | 3.50e-12 | 3 |
capillary | 3.50e-12 | 3 |
respiratory tract | 1.28e-09 | 54 |
foregut | 3.21e-09 | 87 |
open tracheal system trachea | 1.21e-08 | 2 |
perirenal fat | 1.35e-08 | 2 |
segment of respiratory tract | 3.47e-08 | 47 |
respiratory system | 2.31e-07 | 74 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.