FFCP PHASE1:Mm9::chr5:34530706..34530768,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=33|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:34530706..34530768,+|id=chr5:34530706..34530768,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.52e-08,29;UBERON:0005057,1.52e-08,29;UBERON:0000077,2.72e-08,35;UBERON:0003408,2.89e-08,24;UBERON:0006562,4.93e-08,24;UBERON:0001557,4.93e-08,24;UBERON:0001042,4.93e-08,24;UBERON:0008814,4.93e-08,24;UBERON:0009145,4.93e-08,24;UBERON:0001004,5.35e-08,42;UBERON:0002370,8.27e-08,23;UBERON:0000974,8.27e-08,23;UBERON:0004807,8.27e-08,23;UBERON:0005058,8.27e-08,23;UBERON:0003351,8.27e-08,23;UBERON:0009113,8.27e-08,23;UBERON:0003295,8.27e-08,23;UBERON:0009722,8.27e-08,23;UBERON:0005562,8.27e-08,23;UBERON:0007690,8.27e-08,23;UBERON:0000065,1.37e-07,41;UBERON:0000072,6.91e-07,27;UBERON:0002193,7.64e-07,48;UBERON:0002405,7.64e-07,48|phase1_expression=0,0,0,0.30246421130683,0.500895729946347,0.503637815735669,0,10.975482492534,0.281577444303333,1.40438715793196,0.34243593645101,0.239316476986009,4.79362043807376,6.29426897416781,0.333109761815663,1.82227740650843,0,4.57420139769445,3.29074640653773,4.2438965179803,0.680346321208558,1.58865521921416,2.08959831311148,1.11994695955385,0.68822784320151,0.57423196411502,0.430761996159075,0.215471232685889,0.570070258369122,1.00812051903972,1.10865255327652,0.635030673459631,1.84519436275371,0,0.288851619751275,0.166234645358492,0.204169356262369,2.09265815368454,0.7813353445238,0.523523743973798,1.76469446409304,1.36609096991689,0,2.89562681343828,2.53442328048786,1.83546752161682,3.9119567217402,1.30815093828268,0.659058548203415,1.74986909166855,1.25987779462826,0,3.02008690903925,10.1550699881588,7.05796978199174,0,0,0,0.809265843438391,0.528990979272033,0,0.338844532069132,1.77858959222228,0,0,0,1.19840044207362,0.384218305321555,0.207379224616955,0.270011876663381,0,1.14260393761521,0.662605622854841,0.122490799214954,0.191690942036473,0,0,1.27687338085188,1.38245879930619,0.527545150920775,0.365950574409639,0,1.11673199600552,0,0.61119299110724,0.294628585473668,0.284743361598206,0.559198337475902,0.075726193333184,0.0755715601067855,0.869593466105033,0,0,0,0,0.896053774194671,0.983110940922263,0.681721290312231,0.519572009205738,1.41335829804136,0.14084341977668,0,5.09610479413291,0,0.649473123033642,1.01343946190039,0,0.5709193985953,5.69663344023778,2.9688427812965,0.867426633830679,0.304465478312141,1.15307748628029,1.65794904607885,0.470354828542819,2.01066546127481,0.988779870937496,1.15679485535929,0,0.647067399789637,1.10420759230197,0.484875253135222,0,0.878342391034642,0.628340120440365,0.766371165625774,0.718890747035522,0.599902730993408,0.762421362438388,0.898743836428936,0,0.251308704225729,1.39059456153821,1.53429274398198,0.83115217823824,0.486723789203273,0.101839363850316,2.73695335342205,2.77995034277042,0.631325567659422,0.390361328888111,0.689706313300419,0.720248519221397,1.05493372485001,0.408218994907967,1.2811372028485,1.12442069471675,0.776110112217047,0.646703978798527,0.378212160335639,1.40760899331159,0.876782929710299,0.556094498451196,1.39300866608867,1.23469281844766,1.19420560091096,0.702213187313235,0.51469581422943,0,0,0.234526059981096,0.720248245844059,0.473489471170421,0.787056926989615,1.07986979021165,0.930135779001631,0.804820204198858,0.350296027101508,1.31647879930784,0.656669856316381,1.21603214318784,1.75439984910399,1.97595103761946,0.671032093801859,0.630869845692382,0.720332286654991,2.64335026387038,0.264450566663544,0.639864751605702,0.928946687441754,0.38660238396628,0.403367049246685,0.22237804384487,0.760902504450237,0.949058123089023,0.494096864172033,1.25667604400135,0.994782360205754,0.58489226135736,0,0.864552199498777,1.59313018603494,0.379335801906163,1.02823661348756,0,1.22190796707189,1.16371492300575,0.561086559122548,1.39120381673366,1.03327103585722,0.470996183524124,1.60416313098341,0.592905254174298,0.500535317148282,0,0.224862112384854,0,0.482354319504834,0.763877555344259,0.575392274901621,0.486405680325106,0.823684239564244,2.87536413054709,0.372140947668503,0.312037673114561,0.252578877947112,0.717589654087649,0,2.40179147216586,0.757965647081939,0.325929952884052,1.18821560042632,1.17345124144251,1.34005005953453,0.952174563544055,0.585400943573396,2.20689201748667,0.664394068946325,1.43509291791738,2.13022309130459,2.07221978239075,1.59113964439663,1.50791283939272,0.54390568381871,0.983528546038072,1.10374698521893,1.12385412991454,1.05490517932983,0,0.504941854408746,0.315508219416257,1.17131623288992,1.50796378412959,2.38968797952552,1.55959071857676,1.41538265394416,0.404810701674894,0.876767573733936,0.395287777946524,3.53453448063988,0.851640511249612,0.890328018336276,0.488660878060728,1.97964147567043,6.63725691699814,0.728341908464944,2.11626489875326,0.754420319023592,2.06711325016541,0.307435147943927,1.550569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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=33 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:34530706..34530768,+ | |||
|id=chr5:34530706..34530768,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.52e-08,29;UBERON:0005057,1.52e-08,29;UBERON:0000077,2.72e-08,35;UBERON:0003408,2.89e-08,24;UBERON:0006562,4.93e-08,24;UBERON:0001557,4.93e-08,24;UBERON:0001042,4.93e-08,24;UBERON:0008814,4.93e-08,24;UBERON:0009145,4.93e-08,24;UBERON:0001004,5.35e-08,42;UBERON:0002370,8.27e-08,23;UBERON:0000974,8.27e-08,23;UBERON:0004807,8.27e-08,23;UBERON:0005058,8.27e-08,23;UBERON:0003351,8.27e-08,23;UBERON:0009113,8.27e-08,23;UBERON:0003295,8.27e-08,23;UBERON:0009722,8.27e-08,23;UBERON:0005562,8.27e-08,23;UBERON:0007690,8.27e-08,23;UBERON:0000065,1.37e-07,41;UBERON:0000072,6.91e-07,27;UBERON:0002193,7.64e-07,48;UBERON:0002405,7.64e-07,48 | |||
|phase1_expression=0,0,0,0.30246421130683,0.500895729946347,0.503637815735669,0,10.975482492534,0.281577444303333,1.40438715793196,0.34243593645101,0.239316476986009,4.79362043807376,6.29426897416781,0.333109761815663,1.82227740650843,0,4.57420139769445,3.29074640653773,4.2438965179803,0.680346321208558,1.58865521921416,2.08959831311148,1.11994695955385,0.68822784320151,0.57423196411502,0.430761996159075,0.215471232685889,0.570070258369122,1.00812051903972,1.10865255327652,0.635030673459631,1.84519436275371,0,0.288851619751275,0.166234645358492,0.204169356262369,2.09265815368454,0.7813353445238,0.523523743973798,1.76469446409304,1.36609096991689,0,2.89562681343828,2.53442328048786,1.83546752161682,3.9119567217402,1.30815093828268,0.659058548203415,1.74986909166855,1.25987779462826,0,3.02008690903925,10.1550699881588,7.05796978199174,0,0,0,0.809265843438391,0.528990979272033,0,0.338844532069132,1.77858959222228,0,0,0,1.19840044207362,0.384218305321555,0.207379224616955,0.270011876663381,0,1.14260393761521,0.662605622854841,0.122490799214954,0.191690942036473,0,0,1.27687338085188,1.38245879930619,0.527545150920775,0.365950574409639,0,1.11673199600552,0,0.61119299110724,0.294628585473668,0.284743361598206,0.559198337475902,0.075726193333184,0.0755715601067855,0.869593466105033,0,0,0,0,0.896053774194671,0.983110940922263,0.681721290312231,0.519572009205738,1.41335829804136,0.14084341977668,0,5.09610479413291,0,0.649473123033642,1.01343946190039,0,0.5709193985953,5.69663344023778,2.9688427812965,0.867426633830679,0.304465478312141,1.15307748628029,1.65794904607885,0.470354828542819,2.01066546127481,0.988779870937496,1.15679485535929,0,0.647067399789637,1.10420759230197,0.484875253135222,0,0.878342391034642,0.628340120440365,0.766371165625774,0.718890747035522,0.599902730993408,0.762421362438388,0.898743836428936,0,0.251308704225729,1.39059456153821,1.53429274398198,0.83115217823824,0.486723789203273,0.101839363850316,2.73695335342205,2.77995034277042,0.631325567659422,0.390361328888111,0.689706313300419,0.720248519221397,1.05493372485001,0.408218994907967,1.2811372028485,1.12442069471675,0.776110112217047,0.646703978798527,0.378212160335639,1.40760899331159,0.876782929710299,0.556094498451196,1.39300866608867,1.23469281844766,1.19420560091096,0.702213187313235,0.51469581422943,0,0,0.234526059981096,0.720248245844059,0.473489471170421,0.787056926989615,1.07986979021165,0.930135779001631,0.804820204198858,0.350296027101508,1.31647879930784,0.656669856316381,1.21603214318784,1.75439984910399,1.97595103761946,0.671032093801859,0.630869845692382,0.720332286654991,2.64335026387038,0.264450566663544,0.639864751605702,0.928946687441754,0.38660238396628,0.403367049246685,0.22237804384487,0.760902504450237,0.949058123089023,0.494096864172033,1.25667604400135,0.994782360205754,0.58489226135736,0,0.864552199498777,1.59313018603494,0.379335801906163,1.02823661348756,0,1.22190796707189,1.16371492300575,0.561086559122548,1.39120381673366,1.03327103585722,0.470996183524124,1.60416313098341,0.592905254174298,0.500535317148282,0,0.224862112384854,0,0.482354319504834,0.763877555344259,0.575392274901621,0.486405680325106,0.823684239564244,2.87536413054709,0.372140947668503,0.312037673114561,0.252578877947112,0.717589654087649,0,2.40179147216586,0.757965647081939,0.325929952884052,1.18821560042632,1.17345124144251,1.34005005953453,0.952174563544055,0.585400943573396,2.20689201748667,0.664394068946325,1.43509291791738,2.13022309130459,2.07221978239075,1.59113964439663,1.50791283939272,0.54390568381871,0.983528546038072,1.10374698521893,1.12385412991454,1.05490517932983,0,0.504941854408746,0.315508219416257,1.17131623288992,1.50796378412959,2.38968797952552,1.55959071857676,1.41538265394416,0.404810701674894,0.876767573733936,0.395287777946524,3.53453448063988,0.851640511249612,0.890328018336276,0.488660878060728,1.97964147567043,6.63725691699814,0.728341908464944,2.11626489875326,0.754420319023592,2.06711325016541,0.307435147943927,1.55056975900933,1.81766864738753,0.712994756769443,2.84433082142234,1.05418608574999,1.03135543248187,5.7874732978144,0.540183282093931,1.55230420539305,1.71469628025274,1.77340233642274,1.96205699362278,2.79733335023606,1.522324745573,0.704015124191131,1.69465656691056,2.64634077665954,2.4732937941222,0.322928853391811,1.08563264870681,0.477489376012546,1.64140899745061,0.874442509889552,0.18542530201051,2.05045056957423,1.65109494370578,0.740778109478847,1.31857919903284,1.0935538217682,1.37266903923914,0.679913719975421,2.23922323717853,2.07299960706636,0,0.632671987162271,0.406638934253697,1.08005340821801,0.836353184057875,1.09181281873089,0.404593039154462,0.826534557253359,3.14107130380836,0.90730481304255,1.86401793926078,1.12738587736838,0.747582730219894,0.992750942742586,0.583353565032143,1.16243841129958,1.520605129417,0.469428954583016,0.5208175393758,0.838874755405687,1.69108884578204,1.72818003754719,7.90027801570446,1.62180172232131,1.23253148597793,0.649604114888975,4.47566739168704,6.556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| |||
|short_description=p@chr5:34530706..34530768,+ | |||
}} |
Revision as of 07:31, 14 September 2013
Short description: | p@chr5:34530706..34530768, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:34530706..34530768, + |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 1.52e-08 | 29 |
immune organ | 1.52e-08 | 29 |
mixed endoderm/mesoderm-derived structure | 2.72e-08 | 35 |
gland of gut | 2.89e-08 | 24 |
pharynx | 4.93e-08 | 24 |
upper respiratory tract | 4.93e-08 | 24 |
chordate pharynx | 4.93e-08 | 24 |
pharyngeal arch system | 4.93e-08 | 24 |
pharyngeal region of foregut | 4.93e-08 | 24 |
respiratory system | 5.35e-08 | 42 |
thymus | 8.27e-08 | 23 |
neck | 8.27e-08 | 23 |
respiratory system epithelium | 8.27e-08 | 23 |
hemolymphoid system gland | 8.27e-08 | 23 |
pharyngeal epithelium | 8.27e-08 | 23 |
thymic region | 8.27e-08 | 23 |
pharyngeal gland | 8.27e-08 | 23 |
entire pharyngeal arch endoderm | 8.27e-08 | 23 |
thymus primordium | 8.27e-08 | 23 |
early pharyngeal endoderm | 8.27e-08 | 23 |
respiratory tract | 1.37e-07 | 41 |
segment of respiratory tract | 6.91e-07 | 27 |
hemolymphoid system | 7.64e-07 | 48 |
immune system | 7.64e-07 | 48 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.