FFCP PHASE1:Hg19::chr9:139305102..139305123,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23203 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18667 | |||
|TSSclassifier=S | |||
|UniProt=Q10713,Q5SXN0,B4DKL3,Q5SXM9 | |||
|association_with_transcript=0bp_to_ENST00000371717,ENST00000371720,ENST00000399219,NM_015160,uc004chl.2,uc010nbk.2,uc010nbl.2,uc011mdy.1,uc011mdz.1_5end | |||
|description=CAGE_peak_1_at_PMPCA_5end | |||
|id=chr9:139305102..139305123,+ | |||
|ontology_enrichment_celltype=CL:0002321!3.41e-22!248;CL:0000220!8.45e-22!246;CL:0000012!5.19e-20!682;CL:0000548!1.71e-19!679;CL:0000004!1.71e-19!679;CL:0000255!1.71e-19!679;CL:0000144!2.67e-16!625;CL:0000003!7.58e-14!722;CL:0002371!1.09e-13!591;CL:0000222!5.75e-13!119;CL:0000183!8.27e-13!59;CL:0000066!3.95e-12!254;CL:0000393!7.58e-11!60;CL:0000211!7.58e-11!60;CL:0000680!1.24e-10!57;CL:0000056!1.24e-10!57;CL:0000355!1.24e-10!57;CL:0000187!1.66e-10!54;CL:0000055!5.15e-10!180;CL:0000192!1.95e-08!42;CL:0000514!1.95e-08!42;CL:0000359!2.45e-07!32;CL:1000449!4.04e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:1000449;2.22e-07;15!CL:0000359;7.02e-07;32!CL:0000187;7.27e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.19e-22,250;CL:0000222,2.36e-13,121;CL:0000066,4.18e-12,253;CL:0000393,8.64e-11,61;CL:0000211,8.64e-11,61;CL:0000680,1.43e-10,58;CL:0000056,1.43e-10,58;CL:0000355,1.43e-10,58;CL:0000187,1.93e-10,55;CL:0000192,2.27e-08,43;CL:0000514,2.27e-08,43;CL:1000449,2.38e-07,15;CL:0000359,2.45e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!4.11e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;5.07e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,4.11e-07,31 | |||
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| |||
|short_description=p1@PMPCA | |||
}} |
Revision as of 08:11, 14 September 2013
Short description: | p1@PMPCA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_PMPCA_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000371717, ENST00000371720, ENST00000399219, NM_015160, uc004chl.2, uc010nbk.2, uc010nbl.2, uc011mdy.1, uc011mdz.1_5end |
EntrezGene: | PMPCA |
HGNC: | 18667 |
UniProt: | Q10713Q5SXN0B4DKL3Q5SXM9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.19e-22 | 250 |
mesodermal cell | 2.36e-13 | 121 |
epithelial cell | 4.18e-12 | 253 |
electrically responsive cell | 8.64e-11 | 61 |
electrically active cell | 8.64e-11 | 61 |
muscle precursor cell | 1.43e-10 | 58 |
myoblast | 1.43e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.43e-10 | 58 |
muscle cell | 1.93e-10 | 55 |
smooth muscle cell | 2.27e-08 | 43 |
smooth muscle myoblast | 2.27e-08 | 43 |
epithelial cell of nephron | 2.38e-07 | 15 |
vascular associated smooth muscle cell | 2.45e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 4.11e-07 | 31 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.