FFCP PHASE1:Mm9::chr7:53176481..53176497,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=13732|HGNC=|MCL_coexpression_id=115|UniProt=Q3UIF8,O35912|association_with_transcript=-262bp_to_ENSMUST00000164119,NM_001146346,uc009gxv.2_5end|description=CAGE_peak_7_at_Emp3_5end|id=chr7:53176481..53176497,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000049,2.24e-09,19;CL:0000988,2.97e-09,32;CL:0002032,2.97e-09,32;CL:0000037,2.97e-09,32;CL:0000837,2.97e-09,32;CL:0000557,5.34e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.78e-12!48;UBERON:0004177!3.12e-12!29;UBERON:0002370!3.80e-12!23;UBERON:0000974!3.80e-12!23;UBERON:0004807!3.80e-12!23;UBERON:0005058!3.80e-12!23;UBERON:0003351!3.80e-12!23;UBERON:0009113!3.80e-12!23;UBERON:0003295!3.80e-12!23;UBERON:0009722!3.80e-12!23;UBERON:0005562!3.80e-12!23;UBERON:0007690!3.80e-12!23;UBERON:0002390!1.24e-11!45;UBERON:0003061!1.24e-11!45;UBERON:0006562!2.09e-11!24;UBERON:0003408!2.09e-11!24;UBERON:0001557!2.09e-11!24;UBERON:0001042!2.09e-11!24;UBERON:0008814!2.09e-11!24;UBERON:0009145!2.09e-11!24;UBERON:0000072!1.57e-09!27;UBERON:0002405!1.62e-09!70;UBERON:0005057!5.46e-08!51;UBERON:0000065!1.88e-07!41;UBERON:0001004!3.92e-07!42|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.59e-09,23;UBERON:0000974,1.59e-09,23;UBERON:0004807,1.59e-09,23;UBERON:0005058,1.59e-09,23;UBERON:0003351,1.59e-09,23;UBERON:0009113,1.59e-09,23;UBERON:0003295,1.59e-09,23;UBERON:0009722,1.59e-09,23;UBERON:0005562,1.59e-09,23;UBERON:0007690,1.59e-09,23;UBERON:0002390,2.13e-09,45;UBERON:0003061,2.13e-09,45;UBERON:0006562,4.23e-09,24;UBERON:0003408,4.23e-09,24;UBERON:0001557,4.23e-09,24;UBERON:0001042,4.23e-09,24;UBERON:0008814,4.23e-09,24;UBERON:0009145,4.23e-09,24;UBERON:0002193,1.01e-08,48;UBERON:0002405,1.01e-08,48;UBERON:0000072,5.18e-08,27;UBERON:0004177,2.06e-07,29;UBERON:0005057,2.06e-07,29|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.258246646883153,0.140788722151667,0,0,0,0.342401459862411,0.34968160967599,0,0.202475267389826,0.699561878128147,0,0.137114433605739,0,0,4.36880185283895,1.04479915655574,0,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,0.672187598284928,0.257259436035947,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259786004602869,0,0.14084341977668,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0.883366073841574,0,0,0,0,0,4.31334448221313,4.79922184794726,5.46401976414178,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0.219195732427575,0,0,0.205782136407943,0,3.51106593656617,2.31613116403244,1.42081749697796,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0,0,0,0,0,0,0,0.166845105716094,0.393117990226406,0,0.202860121388503,0.482354319504834,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502518772325447,0,0,0.157635144106191,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0,0,0.170870880797853,0.412773735926445,0,0,0.27338845544205,0,1.69978429993855,2.79902904647316,1.52019971184866,0,0,0,0,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0,0,0.258319646955462,0,0.117357238645754,0,0.104859344425711,0.241584120826006,0,0.632022241256357,0.405450430580328,0.718976700153791,1.55904987573354,0.716106782669926,1.19208812868759,1.56254084375959,0.886137163047463,1.11063094942962,1.143102099825,1.51239277705261,1.07203668813728,0.577271049841977,0.584384510907845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.187283014939765,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0.249810577937946,0,0,0,0.441182838239031,0|short_description=p7@Emp3}} | ||
|EntrezGene=13732 | |||
|HGNC= | |||
|MCL_coexpression_id=115 | |||
|UniProt=Q3UIF8,O35912 | |||
|association_with_transcript=-262bp_to_ENSMUST00000164119,NM_001146346,uc009gxv.2_5end | |||
|description=CAGE_peak_7_at_Emp3_5end | |||
|id=chr7:53176481..53176497,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,2.24e-09,19;CL:0000988,2.97e-09,32;CL:0002032,2.97e-09,32;CL:0000037,2.97e-09,32;CL:0000837,2.97e-09,32;CL:0000557,5.34e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.78e-12!48;UBERON:0004177!3.12e-12!29;UBERON:0002370!3.80e-12!23;UBERON:0000974!3.80e-12!23;UBERON:0004807!3.80e-12!23;UBERON:0005058!3.80e-12!23;UBERON:0003351!3.80e-12!23;UBERON:0009113!3.80e-12!23;UBERON:0003295!3.80e-12!23;UBERON:0009722!3.80e-12!23;UBERON:0005562!3.80e-12!23;UBERON:0007690!3.80e-12!23;UBERON:0002390!1.24e-11!45;UBERON:0003061!1.24e-11!45;UBERON:0006562!2.09e-11!24;UBERON:0003408!2.09e-11!24;UBERON:0001557!2.09e-11!24;UBERON:0001042!2.09e-11!24;UBERON:0008814!2.09e-11!24;UBERON:0009145!2.09e-11!24;UBERON:0000072!1.57e-09!27;UBERON:0002405!1.62e-09!70;UBERON:0005057!5.46e-08!51;UBERON:0000065!1.88e-07!41;UBERON:0001004!3.92e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.59e-09,23;UBERON:0000974,1.59e-09,23;UBERON:0004807,1.59e-09,23;UBERON:0005058,1.59e-09,23;UBERON:0003351,1.59e-09,23;UBERON:0009113,1.59e-09,23;UBERON:0003295,1.59e-09,23;UBERON:0009722,1.59e-09,23;UBERON:0005562,1.59e-09,23;UBERON:0007690,1.59e-09,23;UBERON:0002390,2.13e-09,45;UBERON:0003061,2.13e-09,45;UBERON:0006562,4.23e-09,24;UBERON:0003408,4.23e-09,24;UBERON:0001557,4.23e-09,24;UBERON:0001042,4.23e-09,24;UBERON:0008814,4.23e-09,24;UBERON:0009145,4.23e-09,24;UBERON:0002193,1.01e-08,48;UBERON:0002405,1.01e-08,48;UBERON:0000072,5.18e-08,27;UBERON:0004177,2.06e-07,29;UBERON:0005057,2.06e-07,29 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.258246646883153,0.140788722151667,0,0,0,0.342401459862411,0.34968160967599,0,0.202475267389826,0.699561878128147,0,0.137114433605739,0,0,4.36880185283895,1.04479915655574,0,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,0.672187598284928,0.257259436035947,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259786004602869,0,0.14084341977668,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0.883366073841574,0,0,0,0,0,4.31334448221313,4.79922184794726,5.46401976414178,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0.219195732427575,0,0,0.205782136407943,0,3.51106593656617,2.31613116403244,1.42081749697796,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0,0,0,0,0,0,0,0.166845105716094,0.393117990226406,0,0.202860121388503,0.482354319504834,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502518772325447,0,0,0.157635144106191,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0,0,0.170870880797853,0.412773735926445,0,0,0.27338845544205,0,1.69978429993855,2.79902904647316,1.52019971184866,0,0,0,0,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0,0,0.258319646955462,0,0.117357238645754,0,0.104859344425711,0.241584120826006,0,0.632022241256357,0.405450430580328,0.718976700153791,1.55904987573354,0.716106782669926,1.19208812868759,1.56254084375959,0.886137163047463,1.11063094942962,1.143102099825,1.51239277705261,1.07203668813728,0.577271049841977,0.584384510907845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.187283014939765,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0.249810577937946,0,0,0,0.441182838239031,0 | |||
|short_description=p7@Emp3 | |||
}} |
Revision as of 13:49, 14 September 2013
Short description: | p7@Emp3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Emp3_5end |
Coexpression cluster: | MCL_coexpression_mm9:115 |
Association with transcript: | -262bp_to_ENSMUST00000164119, NM_001146346, uc009gxv.2_5end |
EntrezGene: | Emp3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 2.24e-09 | 19 |
hematopoietic cell | 2.97e-09 | 32 |
hematopoietic oligopotent progenitor cell | 2.97e-09 | 32 |
hematopoietic stem cell | 2.97e-09 | 32 |
hematopoietic multipotent progenitor cell | 2.97e-09 | 32 |
granulocyte monocyte progenitor cell | 5.34e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.59e-09 | 23 |
neck | 1.59e-09 | 23 |
respiratory system epithelium | 1.59e-09 | 23 |
hemolymphoid system gland | 1.59e-09 | 23 |
pharyngeal epithelium | 1.59e-09 | 23 |
thymic region | 1.59e-09 | 23 |
pharyngeal gland | 1.59e-09 | 23 |
entire pharyngeal arch endoderm | 1.59e-09 | 23 |
thymus primordium | 1.59e-09 | 23 |
early pharyngeal endoderm | 1.59e-09 | 23 |
hematopoietic system | 2.13e-09 | 45 |
blood island | 2.13e-09 | 45 |
pharynx | 4.23e-09 | 24 |
gland of gut | 4.23e-09 | 24 |
upper respiratory tract | 4.23e-09 | 24 |
chordate pharynx | 4.23e-09 | 24 |
pharyngeal arch system | 4.23e-09 | 24 |
pharyngeal region of foregut | 4.23e-09 | 24 |
hemolymphoid system | 1.01e-08 | 48 |
immune system | 1.01e-08 | 48 |
segment of respiratory tract | 5.18e-08 | 27 |
hemopoietic organ | 2.06e-07 | 29 |
immune organ | 2.06e-07 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.