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FFCP PHASE1:Mm9::chr8:26127778..26127792,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=69742|HGNC=|MCL_coexpression_id=641|UniProt=Q8R0I4|association_with_transcript=95bp_to_ENSMUST00000033961,NM_027194,uc009lfm.2,uc009lfn.2_5end|description=CAGE_peak_2_at_Tm2d2_5end|id=chr8:26127778..26127792,+|ontology_enrichment_celltype=CL:0000055!5.60e-14!50;CL:0000144!6.08e-13!121;CL:0000012!6.08e-13!121;CL:0000548!2.39e-12!115;CL:0000004!2.39e-12!115;CL:0000255!2.39e-12!115;CL:0002321!3.06e-12!70;CL:0000220!3.06e-12!70;CL:0002371!3.92e-12!118;CL:0000723!2.97e-11!91;CL:0000048!2.97e-11!91;CL:0000034!5.11e-11!97;CL:0000221!2.02e-10!44;CL:0000133!2.02e-10!44;CL:0002319!2.02e-10!43;CL:0000393!2.48e-09!39;CL:0000211!2.48e-09!39|ontology_enrichment_celltype_v019_2=CL:0002321,1.18e-12,70;CL:0000723,2.31e-11,91;CL:0000048,2.31e-11,91;CL:0000034,3.66e-11,97;CL:0002319,1.43e-10,43;CL:0000221,1.44e-10,44;CL:0000133,1.44e-10,44;CL:0000393,1.78e-09,39;CL:0000211,1.78e-09,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!6.34e-10!75;UBERON:0001016!6.34e-10!75;UBERON:0001017!7.61e-10!73;UBERON:0005743!7.61e-10!73;UBERON:0002346!6.32e-07!71;UBERON:0003075!6.32e-07!71;UBERON:0007284!6.32e-07!71;UBERON:0004121!8.54e-07!102;UBERON:0000924!8.54e-07!102;UBERON:0006601!8.54e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.41e-10,75;UBERON:0001017,6.49e-10,73;UBERON:0002346,4.66e-07,64;UBERON:0003075,4.66e-07,64;UBERON:0007284,4.66e-07,64;UBERON:0004121,8.49e-07,95;UBERON:0000924,8.49e-07,95;UBERON:0006601,8.49e-07,95|phase1_expression=1.76163731815273,0.348975407639361,1.36499771816861,1.51232105653415,2.00358291978539,2.18243053485457,2.10251376535973,0.645616617207881,0.84473233291,1.40438715793196,0.68487187290202,0.398860794976682,0.684802919724823,0.262261207256992,0.999329285446988,0.404950534779652,1.39912375625629,2.36596624018678,2.4680598049033,2.97072756258621,6.54833334163237,1.78723712161594,1.82839852397255,2.55987876469451,4.81759490241057,1.72269589234506,3.01533397311352,1.72376986148711,3.23039813075836,2.01624103807945,4.21287970245079,1.27006134691926,0.61506478758457,0,1.73310971850765,1.49611180822643,2.24586291888606,1.67412652294763,2.3440060335714,1.57057123192139,1.76469446409304,0,3.88408282424923,4.28049181116963,4.8660926985367,7.70896359079063,16.4302182313088,5.45062890951116,9.88587822305123,10.1103547518627,7.69925318939494,7.18762821824858,5.70460860596304,2.90144856804538,4.36921938885203,15.4355661621568,6.5902691185914,9.28209766099396,5.66486090406874,5.28990979272033,3.1691570175309,10.8430250262122,8.00365316500025,26.996991518442,16.8107281636386,27.7087244828979,4.49400165777607,6.91592949578798,3.00699875694585,3.37514845829227,5.25812403378455,3.99911378165325,4.63823935998388,2.44981598429908,1.72521847832825,3.67687514644008,0,2.68143409978894,2.4577045320999,5.80299666012853,5.03182039813253,4.68822033501084,3.62937898701795,3.37657566019008,2.13917546887534,3.53554302568401,3.27454865837937,6.71038004971082,3.48340489332647,1.66257432234928,2.02905142091174,6.88339101585109,4.0798280022465,9.17495425784289,8.4470934268197,3.58421509677868,4.49422144421606,3.40860645156115,4.67614808285164,5.65343319216544,2.25349471642689,1.28326477414318,0,0,8.22665955842614,9.88103475352884,12.1325866803548,4.79572294820052,0.258937883647172,2.07818994690755,2.08182392119363,1.82679286987285,1.84492397804847,1.3565037649736,2.23418543557839,3.01599819191221,1.97755974187499,1.01219549843938,0,0.970601099684455,1.54589062922275,1.45462575940567,7.45567044872489,1.46390398505774,0.628340120440365,1.27728527604296,4.43315960671905,4.19931911695385,4.95573885584952,1.49790639404823,2.28750301409313,1.7591609295801,1.91206752211504,3.3243009452943,3.32460871295296,2.27137768294861,1.52759045775474,2.98576729464223,2.27450482590307,1.26265113531884,2.86264974517948,2.5289231487682,1.98068342785884,3.16480117455002,1.36072998302656,2.94661556655154,1.49922759295566,1.81092359517311,4.74249584452253,1.89106080167819,2.11141348996739,1.97276159184817,1.94633074457919,1.0447564995665,0.823128545631774,1.79130840136644,4.21327912387941,2.31613116403244,2.27330799516474,1.86413195281952,2.11073453982987,2.34080679899319,2.13070262026689,1.96764231747404,1.69693824176116,1.16266972375204,2.14618721119695,1.86824547787471,1.81015834904829,1.31333971263276,1.94565142910054,1.16959989940266,0.658650345873152,1.20785776884335,1.89260953707715,1.85228302282712,0.660837565967596,0.528901133327089,2.77274725695804,1.62565670302307,1.28867461322093,1.21010114774006,0.667134131534611,0.570676878337677,3.79623249235609,1.31759163779209,1.75934646160189,1.59165177632921,2.9244613067868,0.898819408654221,1.08069024937347,0.796565093017469,5.12103332573321,3.19895835307241,1.1270773567308,3.25842124552503,3.29719228184964,4.34842083319975,7.27220176928959,6.7900668070617,8.94892748695836,11.7227305725711,5.92905254174298,1.33476084572875,1.17935397067922,1.12431056192427,0.608580364165509,0.964708639009667,1.78238096246994,1.43848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|EntrezGene=69742
|HGNC=
|MCL_coexpression_id=641
|UniProt=Q8R0I4
|association_with_transcript=95bp_to_ENSMUST00000033961,NM_027194,uc009lfm.2,uc009lfn.2_5end
|description=CAGE_peak_2_at_Tm2d2_5end
|id=chr8:26127778..26127792,+
|ontology_enrichment_celltype=CL:0000055!5.60e-14!50;CL:0000144!6.08e-13!121;CL:0000012!6.08e-13!121;CL:0000548!2.39e-12!115;CL:0000004!2.39e-12!115;CL:0000255!2.39e-12!115;CL:0002321!3.06e-12!70;CL:0000220!3.06e-12!70;CL:0002371!3.92e-12!118;CL:0000723!2.97e-11!91;CL:0000048!2.97e-11!91;CL:0000034!5.11e-11!97;CL:0000221!2.02e-10!44;CL:0000133!2.02e-10!44;CL:0002319!2.02e-10!43;CL:0000393!2.48e-09!39;CL:0000211!2.48e-09!39
|ontology_enrichment_celltype_v019_2=CL:0002321,1.18e-12,70;CL:0000723,2.31e-11,91;CL:0000048,2.31e-11,91;CL:0000034,3.66e-11,97;CL:0002319,1.43e-10,43;CL:0000221,1.44e-10,44;CL:0000133,1.44e-10,44;CL:0000393,1.78e-09,39;CL:0000211,1.78e-09,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!6.34e-10!75;UBERON:0001016!6.34e-10!75;UBERON:0001017!7.61e-10!73;UBERON:0005743!7.61e-10!73;UBERON:0002346!6.32e-07!71;UBERON:0003075!6.32e-07!71;UBERON:0007284!6.32e-07!71;UBERON:0004121!8.54e-07!102;UBERON:0000924!8.54e-07!102;UBERON:0006601!8.54e-07!102
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.41e-10,75;UBERON:0001017,6.49e-10,73;UBERON:0002346,4.66e-07,64;UBERON:0003075,4.66e-07,64;UBERON:0007284,4.66e-07,64;UBERON:0004121,8.49e-07,95;UBERON:0000924,8.49e-07,95;UBERON:0006601,8.49e-07,95
|phase1_expression=1.76163731815273,0.348975407639361,1.36499771816861,1.51232105653415,2.00358291978539,2.18243053485457,2.10251376535973,0.645616617207881,0.84473233291,1.40438715793196,0.68487187290202,0.398860794976682,0.684802919724823,0.262261207256992,0.999329285446988,0.404950534779652,1.39912375625629,2.36596624018678,2.4680598049033,2.97072756258621,6.54833334163237,1.78723712161594,1.82839852397255,2.55987876469451,4.81759490241057,1.72269589234506,3.01533397311352,1.72376986148711,3.23039813075836,2.01624103807945,4.21287970245079,1.27006134691926,0.61506478758457,0,1.73310971850765,1.49611180822643,2.24586291888606,1.67412652294763,2.3440060335714,1.57057123192139,1.76469446409304,0,3.88408282424923,4.28049181116963,4.8660926985367,7.70896359079063,16.4302182313088,5.45062890951116,9.88587822305123,10.1103547518627,7.69925318939494,7.18762821824858,5.70460860596304,2.90144856804538,4.36921938885203,15.4355661621568,6.5902691185914,9.28209766099396,5.66486090406874,5.28990979272033,3.1691570175309,10.8430250262122,8.00365316500025,26.996991518442,16.8107281636386,27.7087244828979,4.49400165777607,6.91592949578798,3.00699875694585,3.37514845829227,5.25812403378455,3.99911378165325,4.63823935998388,2.44981598429908,1.72521847832825,3.67687514644008,0,2.68143409978894,2.4577045320999,5.80299666012853,5.03182039813253,4.68822033501084,3.62937898701795,3.37657566019008,2.13917546887534,3.53554302568401,3.27454865837937,6.71038004971082,3.48340489332647,1.66257432234928,2.02905142091174,6.88339101585109,4.0798280022465,9.17495425784289,8.4470934268197,3.58421509677868,4.49422144421606,3.40860645156115,4.67614808285164,5.65343319216544,2.25349471642689,1.28326477414318,0,0,8.22665955842614,9.88103475352884,12.1325866803548,4.79572294820052,0.258937883647172,2.07818994690755,2.08182392119363,1.82679286987285,1.84492397804847,1.3565037649736,2.23418543557839,3.01599819191221,1.97755974187499,1.01219549843938,0,0.970601099684455,1.54589062922275,1.45462575940567,7.45567044872489,1.46390398505774,0.628340120440365,1.27728527604296,4.43315960671905,4.19931911695385,4.95573885584952,1.49790639404823,2.28750301409313,1.7591609295801,1.91206752211504,3.3243009452943,3.32460871295296,2.27137768294861,1.52759045775474,2.98576729464223,2.27450482590307,1.26265113531884,2.86264974517948,2.5289231487682,1.98068342785884,3.16480117455002,1.36072998302656,2.94661556655154,1.49922759295566,1.81092359517311,4.74249584452253,1.89106080167819,2.11141348996739,1.97276159184817,1.94633074457919,1.0447564995665,0.823128545631774,1.79130840136644,4.21327912387941,2.31613116403244,2.27330799516474,1.86413195281952,2.11073453982987,2.34080679899319,2.13070262026689,1.96764231747404,1.69693824176116,1.16266972375204,2.14618721119695,1.86824547787471,1.81015834904829,1.31333971263276,1.94565142910054,1.16959989940266,0.658650345873152,1.20785776884335,1.89260953707715,1.85228302282712,0.660837565967596,0.528901133327089,2.77274725695804,1.62565670302307,1.28867461322093,1.21010114774006,0.667134131534611,0.570676878337677,3.79623249235609,1.31759163779209,1.75934646160189,1.59165177632921,2.9244613067868,0.898819408654221,1.08069024937347,0.796565093017469,5.12103332573321,3.19895835307241,1.1270773567308,3.25842124552503,3.29719228184964,4.34842083319975,7.27220176928959,6.7900668070617,8.94892748695836,11.7227305725711,5.92905254174298,1.33476084572875,1.17935397067922,1.12431056192427,0.608580364165509,0.964708639009667,1.78238096246994,1.43848068725405,2.10775794807546,2.19649130550465,1.43768206527355,1.48856379067401,2.80833905803104,1.76805214562978,1.61457672169721,7.71909634181387,1.47802552133284,3.41084541186873,1.30371981153621,2.03694102930226,1.87752198630802,0.335012514883631,2.61848004974615,2.34160377429359,1.89162172927429,1.55025282754142,1.91345722388985,2.45794972073607,1.38147985492716,3.7608755231193,9.04747703635634,19.5806046174735,1.47529281905711,1.37968373152366,2.56880943980467,3.7507739709505,1.96721934452011,1.76729649043061,4.41711507182759,3.51394869866975,3.66219776145758,2.15071918157297,1.78238939265915,2.83076530788832,5.66734982344852,2.63030272120181,1.58115111178609,2.24924921495265,2.41298144854057,1.95872164033981,2.93196526836437,1.97964147567043,1.32745138339963,2.6705869977048,1.209294227859,0.565815239267694,3.2483208216885,1.53717573971964,0.775284879504663,1.45413491791002,1.06949213515416,0.632073515871632,1.05418608574999,1.03135543248187,3.06395645178409,2.34079422240703,3.10460841078611,2.35770738534752,2.48276327099183,1.24858172321449,2.46823530903181,3.34911444026059,1.17335854031855,2.1183207086382,3.52845436887939,0.65954501176592,0.645857706783622,1.08563264870681,1.3130957840345,0.656563598980245,2.04036585640896,1.11255181206306,0.512612642393558,1.65109494370578,1.11116716421827,0.376736914009382,1.0935538217682,0.228778173206523,2.37969801991397,4.19854356970974,3.86959926652387,1.90934123603023,1.26534397432454,1.21991680276109,1.29606408986162,1.25452977608681,1.31017538247707,1.75323650300267,1.90102948168273,2.87931536182433,2.85152941241944,1.24267862617385,3.38215763210514,2.8408143748356,2.64733584731356,1.75006069509643,2.32487682259916,2.02747350588934,1.29092962510329,1.95306577265925,0.943734099831398,4.59009829569411,3.74439008135225,0.316011120628178,1.21635129174099,1.02710957164827,0.909445760844565,0.537080087002444,0.596044064343795,1.20195449519969,1.18151621739662,0.504832249740738,0.609654453239999,1.00826185136841,0.682205165178267,0.673482891482306,0.584384510907845,1.36038230169127,1.33191572024439,1.79427713218951,0.503653849092235,1.9318959403219,3.56596703357246,1.64836461840539,1.71494703263253,2.50786052017682,3.3885110557024,2.76195141904306,3.43737308063638,6.35856774671644,2.74033007908257,0.755393897389701,2.02506750069542,3.60256962579376,1.81256963593682,1.55328093525546,1.14166082342594,0.399024873401031,1.87806966329548,1.70174701947806,0.628839487883947,0.551530525350042,1.33348036680969,1.23621034343337,1.28367683836726,1.51618327058278,0.760437899670719,0.943131706930381,1.87283014939765,1.02440243847791,1.03383844120104,2.38146845641537,1.15884325944855,1.35036454324594,1.23625770240992,1.17759136107518,1.02860775715625,2.30718548007139,0.238436189947321,1.45346416632329,1.31753132581463,1.01537529470012,0.73171189149109,0.789209134313529,1.49384525230448,0,0.830445126869219,1.0835493061312,1.22769312950907,1.70430525304563,1.15743966588685,1.74867404556562,1.87145286756327,1.28922632428979,0.57386499620653,0.882365676478062,1.62307484934295
|short_description=p2@Tm2d2
}}

Revision as of 15:24, 14 September 2013

Short description:p2@Tm2d2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Tm2d2_5end
Coexpression cluster:MCL_coexpression_mm9:641
Association with transcript: 95bp_to_ENSMUST00000033961, NM_027194, uc009lfm.2, uc009lfn.2_5end
EntrezGene:Tm2d2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Tm2d2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.76
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.10
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.40
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.37
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.47
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.97
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.83
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.82
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I13.02
GP2+ M cell, pool3.CNhs13240.11847-124I21.72
Ileum epithelium, pool1.CNhs13199.10252-104B93.23
Ileum epithelium, pool2.CNhs13232.10253-104C12.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.21
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.28
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.87
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B37.71
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B716.43
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.45
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B89.89
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C310.11
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.70
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.37
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C115.44
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.59
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C59.28
Mouse Granule cells, donor1.CNhs12131.11713-123C35.66
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C610.84
Mouse Meningeal cells, donor3.CNhs12109.11639-122D18.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C727.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E716.81
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D227.71
Mouse Microglia, donor1.CNhs12629.11718-123C84.49
Mouse Microglia, donor2.CNhs12634.11736-123E86.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.01
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.38
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.64
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.45
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.73
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.68
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.80
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.03
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.71
Mouse Schwann, donor1.CNhs12507.11728-123D93.48
Mouse Schwann, donor2.CNhs12573.11746-123F91.66
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.88
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C89.17
Mouse hepatocyte, donor6.CNhs13090.11822-124F48.45
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.58
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.49
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.41
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I85.65
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.25
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G18.23
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G29.88
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G312.13
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D72.08
adrenal gland, embryo E14.CNhs11038.406-44C52.08
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I11.84
adrenal gland, embryo E18.CNhs11026.1262-18F51.36
adrenal gland, neonate N00.CNhs11191.1311-23C12.23
adrenal gland, neonate N25.CNhs11223.1377-27I33.02
amnion, adult pregnant day17.5.CNhs10488.583-22A81.98
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.43
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.96
corpora quadrigemina, adult.CNhs10501.16-22A41.50
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F11.76
cortex, adult.CNhs10473.12-14D51.91
cortex, neonate N30.CNhs11107.1392-42F23.32
diencephalon, adult.CNhs10482.20-12F23.32
diencephalon, neonate N30.CNhs11201.1388-42B22.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.53
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.99
epididymis, adult.CNhs10490.58-23B22.27
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C62.86
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C91.98
eyeball, embryo E17.CNhs11023.1261-18D43.16
eyeball, neonate N00.CNhs11207.633-15C61.36
eyeball, neonate N01.CNhs11140.1532-43E72.95
eyeball, neonate N02.CNhs11205.1551-44G81.50
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E24.74
forelimb, embryo E12.CNhs10600.359-14H21.89
forelimb, embryo E13.CNhs10589.384-1E22.11
forelimb, embryo E14.CNhs10577.413-26A81.97
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I61.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.21
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.32
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.27
heart, embryo E11.CNhs10586.331-24E91.86
heart, embryo E12.CNhs11015.353-12F52.11
heart, embryo E13.CNhs11013.376-3I92.34
heart, embryo E14.CNhs10597.403-26D42.13
heart, embryo E15.CNhs11017.431-16C81.97
heart, embryo E16.CNhs11021.457-17C61.70
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G32.15
heart, neonate N00.CNhs11213.639-21E31.87
heart, neonate N03.CNhs11221.1349-25I21.81
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G11.95
heart, neonate N20.CNhs11127.821-26I61.17
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D21.21
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G11.85
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I52.77
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D81.29
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D13.80
intestine, neonate N01.CNhs11192.1322-23E91.32
intestine, neonate N06.CNhs11102.688-20B81.76
intestine, neonate N07.CNhs11095.720-20F21.59
intestine, neonate N10.CNhs11098.755-23A52.92
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I95.12
kidney, embryo E15.CNhs10997.434-16F83.20
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I23.26
kidney, embryo E18.CNhs11001.1288-20C73.30
kidney, neonate N00.CNhs11214.646-21G74.35
kidney, neonate N10.CNhs11206.758-6D57.27
kidney, neonate N20.CNhs11113.832-19I16.79
kidney, neonate N25.CNhs11122.1353-25F38.95
kidney, neonate N30.CNhs11203.1385-42H111.72
liver, adult pregnant day01.CNhs10466.508-5B25.93
liver, embryo E12.CNhs10601.355-15F81.33
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F42.11
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B92.81
liver, neonate N20.CNhs11220.823-25A31.77
liver, neonate N25.CNhs11198.1368-26H11.61
liver, neonate N30.CNhs11106.1382-42D17.72
lung, adult.CNhs10474.28-22B11.48
lung, embryo E12.CNhs10522.354-16G23.41
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C52.04
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I62.62
lung, neonate N00.CNhs11224.640-42C62.34
lung, neonate N06.CNhs11212.683-20E51.89
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E61.91
lung, neonate N20.CNhs11109.822-18A42.46
lung, neonate N25.CNhs11119.1359-25C71.38
lung, neonate N30.CNhs11133.1394-42H23.76
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A19.05
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A119.58
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C22.57
medulla oblongata, neonate N30.CNhs11200.1396-42A33.75
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.97
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.42
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.51
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.66
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.67
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.63
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I72.41
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I42.93
oviduct, adult pregnant day01.CNhs10500.988-6G61.98
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F42.67
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G33.25
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E62.34
pituitary gland, embryo E13.CNhs11009.370-44C73.10
pituitary gland, embryo E14.CNhs11037.398-44A52.36
pituitary gland, embryo E15.CNhs10592.427-16B92.48
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F52.47
pituitary gland, neonate N00.CNhs11190.1308-22E93.35
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G32.12
prostate, adult.CNhs10470.859-1F83.53
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H31.09
skin, neonate N06.CNhs11097.693-20I51.31
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I12.04
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H11.09
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.87
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D41.30
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B81.75
stomach, neonate N07.CNhs11210.718-18A91.90
stomach, neonate N25.CNhs11104.1355-25E42.88
stomach, neonate N30.CNhs11134.1386-42I12.85
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G53.38
testis, embryo E13.CNhs11031.389-23F52.84
testis, embryo E15.CNhs11034.443-27C52.65
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I52.32
testis, embryo E18.CNhs11027.503-18G52.03
testis, neonate N00.CNhs11189.1300-22B71.29
testis, neonate N07.CNhs11222.726-26I41.95
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H34.59
testis, neonate N30.CNhs11130.1391-42E23.74
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I21.03
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F81.20
thymus, neonate N03.CNhs11137.2104-43C71.18
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.61
thymus, neonate N10.CNhs11194.748-24E41.01
thymus, neonate N20.CNhs11186.820-7A20.68
thymus, neonate N25.CNhs11125.1362-25G70.67
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.79
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E41.93
uterus, adult pregnant day19.CNhs10497.590-15F53.57
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D51.71
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.36
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.88
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
embryonic cell1.18e-1270
somatic stem cell2.31e-1191
multi fate stem cell2.31e-1191
stem cell3.66e-1197
neural cell1.43e-1043
ectodermal cell1.44e-1044
neurectodermal cell1.44e-1044
electrically responsive cell1.78e-0939
electrically active cell1.78e-0939

Uber anatomy
Ontology termp-valuen
nervous system5.41e-1075
central nervous system6.49e-1073
neurectoderm4.66e-0764
neural plate4.66e-0764
presumptive neural plate4.66e-0764
ectoderm-derived structure8.49e-0795
ectoderm8.49e-0795
presumptive ectoderm8.49e-0795







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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