FFCP PHASE1:Mm9::chr9:110556673..110556716,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=235627|HGNC=|UniProt=Q6ZQA0,E9Q9L6,B2RXS1,B7ZWL5|association_with_transcript=-8bp_to_ENSMUST00000133191,ENSMUST00000167320,NM_183276,uc009rul.2,uc012hbk.1_5end|description=CAGE_peak_2_at_Nbeal2_5end|id=chr9:110556673..110556716,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001004!3.00e-11!42;UBERON:0000065!1.05e-10!41;UBERON:0000072!3.58e-08!27;UBERON:0003408!1.73e-07!24;UBERON:0006562!1.93e-07!24;UBERON:0001557!1.93e-07!24;UBERON:0001042!1.93e-07!24;UBERON:0008814!1.93e-07!24;UBERON:0009145!1.93e-07!24;UBERON:0000063!5.82e-07!35;UBERON:0002370!5.87e-07!23;UBERON:0000974!5.87e-07!23;UBERON:0004807!5.87e-07!23;UBERON:0005058!5.87e-07!23;UBERON:0003351!5.87e-07!23;UBERON:0009113!5.87e-07!23;UBERON:0003295!5.87e-07!23;UBERON:0009722!5.87e-07!23;UBERON:0005562!5.87e-07!23;UBERON:0007690!5.87e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0001004,2.85e-12,42;UBERON:0000065,1.07e-11,41;UBERON:0000072,4.81e-09,27;UBERON:0003408,2.43e-08,24;UBERON:0006562,2.74e-08,24;UBERON:0001557,2.74e-08,24;UBERON:0001042,2.74e-08,24;UBERON:0008814,2.74e-08,24;UBERON:0009145,2.74e-08,24;UBERON:0007811,8.15e-08,36;UBERON:0002370,8.87e-08,23;UBERON:0000974,8.87e-08,23;UBERON:0004807,8.87e-08,23;UBERON:0005058,8.87e-08,23;UBERON:0003351,8.87e-08,23;UBERON:0009113,8.87e-08,23;UBERON:0003295,8.87e-08,23;UBERON:0009722,8.87e-08,23;UBERON:0005562,8.87e-08,23;UBERON:0007690,8.87e-08,23;UBERON:0000153,2.89e-07,43|phase1_expression=1.76163731815273,0.348975407639361,0,1.20985684522732,1.00179145989269,1.34303417529512,0.700837921786577,7.87652272993615,2.67498572088167,3.97909694747389,1.71217968225505,4.06838010876216,8.38883576662908,7.86783621770977,0.666219523631325,1.01237633694913,0,3.15462165358238,3.29074640653773,1.69755860719212,2.04103896362567,1.58865521921416,2.35079810225042,0.47997726838022,0.91763712426868,0,0.86152399231815,1.07735616342945,0.190023419456374,0.252030129759931,0.443461021310609,5.08024538767705,9.84103660135312,0,1.73310971850765,1.82858109894342,2.45003227514843,7.11503772252743,5.4693474116666,5.23523743973798,8.82347232046521,4.78131839470912,6.79714494243615,0.881277725829041,1.11514624341466,0.367093504323363,0.782391344348039,0.436050312760893,1.09843091367236,1.36100929351998,2.37976916763116,1.43752564364972,2.51673909086605,7.97898356212479,3.36093799142464,0.514518872071894,0,0,0.606949382578793,1.5869729378161,0,0,0,1.3498495759221,0,1.4209602298922,0.898800331555214,1.53687322128622,0.311068836925433,0.270011876663381,0.420649922702764,1.42825492201902,0.662605622854841,0.367472397644862,0.383381884072945,1.83843757322004,0,0.510749352340751,1.38245879930619,1.18697658957174,1.64677758484337,1.04182674111352,1.11673199600552,2.8138130501584,1.83357897332172,0.883885756421003,1.28134512719193,1.86399445825301,0.681535739998656,0.302286240427142,1.73918693221007,0,0,0,0.649776417447669,0.448026887097336,1.26399978118577,0.340860645156116,0,0,3.66192891419369,0,0,0,2.81438353314578,3.54703811665138,2.02209778005913,1.1418387971906,2.58937883647172,3.11728492036132,0.346970653532272,0.913396434936424,1.38369298353635,1.05505848386836,1.88141931417128,1.13099932196708,0.494389935468748,1.59059292611903,2.65383165584962,0.808834249737046,1.10420759230197,0,0,4.39171195517321,5.23616767033638,2.04365644166873,1.55759661857696,1.79970819298022,2.03312363316904,4.04434726393021,3.20250421973039,0.879580464790051,1.39059456153821,1.02286182932132,1.45451631191692,2.75810147215188,1.73126918545538,1.36847667671102,2.0217820674694,5.47148825304832,0.780722657776222,0.919608417733892,0.720248519221397,1.9591626318643,1.90502197623718,1.7935920839879,1.59292931751539,3.10444044886819,0.215567992932842,0.567318240503458,0.351902248327898,2.19195732427575,4.44875598760957,3.1342694986995,3.08673204611915,0.398068533636986,1.40442637462647,1.54408744268829,1.42081749697796,1.65700618028402,0.469052119962192,0.720248245844059,0.946978942340841,1.77087808572663,1.23413690309903,2.32533944750408,2.68273401399619,1.98501082024188,1.97471819896177,1.31333971263276,1.4592385718254,1.46199987425332,1.3173006917463,1.07365135008297,1.05144974282064,1.02904612379284,0.991256348951394,1.32225283331772,0.213288250535234,0.928946687441754,2.44848176511977,1.21010114774006,1.11189021922435,1.90225626112559,0.949058123089023,0.988193728344065,0.754005626400808,0.994782360205754,1.55971269695296,1.79763881730844,0.864552199498777,0.597423819763102,1.32767530667157,1.82797620175566,1.1270773567308,2.03651327845314,3.87904974335251,2.24434623649019,2.78240763346732,5.16635517928608,3.29697328466887,3.82531208157582,0,0.83422552858047,0.589676985339609,0.674586337154561,0.811440485554012,0.241177159752417,0.763877555344259,1.43848068725405,0.972811360650212,0.823684239564244,1.43768206527355,0.744281895337007,0.936113019343682,1.26289438973556,0.896987067609561,0.482443521363367,3.32555742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| ||
|EntrezGene=235627 | |||
|HGNC= | |||
|UniProt=Q6ZQA0,E9Q9L6,B2RXS1,B7ZWL5 | |||
|association_with_transcript=-8bp_to_ENSMUST00000133191,ENSMUST00000167320,NM_183276,uc009rul.2,uc012hbk.1_5end | |||
|description=CAGE_peak_2_at_Nbeal2_5end | |||
|id=chr9:110556673..110556716,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!3.00e-11!42;UBERON:0000065!1.05e-10!41;UBERON:0000072!3.58e-08!27;UBERON:0003408!1.73e-07!24;UBERON:0006562!1.93e-07!24;UBERON:0001557!1.93e-07!24;UBERON:0001042!1.93e-07!24;UBERON:0008814!1.93e-07!24;UBERON:0009145!1.93e-07!24;UBERON:0000063!5.82e-07!35;UBERON:0002370!5.87e-07!23;UBERON:0000974!5.87e-07!23;UBERON:0004807!5.87e-07!23;UBERON:0005058!5.87e-07!23;UBERON:0003351!5.87e-07!23;UBERON:0009113!5.87e-07!23;UBERON:0003295!5.87e-07!23;UBERON:0009722!5.87e-07!23;UBERON:0005562!5.87e-07!23;UBERON:0007690!5.87e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,2.85e-12,42;UBERON:0000065,1.07e-11,41;UBERON:0000072,4.81e-09,27;UBERON:0003408,2.43e-08,24;UBERON:0006562,2.74e-08,24;UBERON:0001557,2.74e-08,24;UBERON:0001042,2.74e-08,24;UBERON:0008814,2.74e-08,24;UBERON:0009145,2.74e-08,24;UBERON:0007811,8.15e-08,36;UBERON:0002370,8.87e-08,23;UBERON:0000974,8.87e-08,23;UBERON:0004807,8.87e-08,23;UBERON:0005058,8.87e-08,23;UBERON:0003351,8.87e-08,23;UBERON:0009113,8.87e-08,23;UBERON:0003295,8.87e-08,23;UBERON:0009722,8.87e-08,23;UBERON:0005562,8.87e-08,23;UBERON:0007690,8.87e-08,23;UBERON:0000153,2.89e-07,43 | |||
|phase1_expression=1.76163731815273,0.348975407639361,0,1.20985684522732,1.00179145989269,1.34303417529512,0.700837921786577,7.87652272993615,2.67498572088167,3.97909694747389,1.71217968225505,4.06838010876216,8.38883576662908,7.86783621770977,0.666219523631325,1.01237633694913,0,3.15462165358238,3.29074640653773,1.69755860719212,2.04103896362567,1.58865521921416,2.35079810225042,0.47997726838022,0.91763712426868,0,0.86152399231815,1.07735616342945,0.190023419456374,0.252030129759931,0.443461021310609,5.08024538767705,9.84103660135312,0,1.73310971850765,1.82858109894342,2.45003227514843,7.11503772252743,5.4693474116666,5.23523743973798,8.82347232046521,4.78131839470912,6.79714494243615,0.881277725829041,1.11514624341466,0.367093504323363,0.782391344348039,0.436050312760893,1.09843091367236,1.36100929351998,2.37976916763116,1.43752564364972,2.51673909086605,7.97898356212479,3.36093799142464,0.514518872071894,0,0,0.606949382578793,1.5869729378161,0,0,0,1.3498495759221,0,1.4209602298922,0.898800331555214,1.53687322128622,0.311068836925433,0.270011876663381,0.420649922702764,1.42825492201902,0.662605622854841,0.367472397644862,0.383381884072945,1.83843757322004,0,0.510749352340751,1.38245879930619,1.18697658957174,1.64677758484337,1.04182674111352,1.11673199600552,2.8138130501584,1.83357897332172,0.883885756421003,1.28134512719193,1.86399445825301,0.681535739998656,0.302286240427142,1.73918693221007,0,0,0,0.649776417447669,0.448026887097336,1.26399978118577,0.340860645156116,0,0,3.66192891419369,0,0,0,2.81438353314578,3.54703811665138,2.02209778005913,1.1418387971906,2.58937883647172,3.11728492036132,0.346970653532272,0.913396434936424,1.38369298353635,1.05505848386836,1.88141931417128,1.13099932196708,0.494389935468748,1.59059292611903,2.65383165584962,0.808834249737046,1.10420759230197,0,0,4.39171195517321,5.23616767033638,2.04365644166873,1.55759661857696,1.79970819298022,2.03312363316904,4.04434726393021,3.20250421973039,0.879580464790051,1.39059456153821,1.02286182932132,1.45451631191692,2.75810147215188,1.73126918545538,1.36847667671102,2.0217820674694,5.47148825304832,0.780722657776222,0.919608417733892,0.720248519221397,1.9591626318643,1.90502197623718,1.7935920839879,1.59292931751539,3.10444044886819,0.215567992932842,0.567318240503458,0.351902248327898,2.19195732427575,4.44875598760957,3.1342694986995,3.08673204611915,0.398068533636986,1.40442637462647,1.54408744268829,1.42081749697796,1.65700618028402,0.469052119962192,0.720248245844059,0.946978942340841,1.77087808572663,1.23413690309903,2.32533944750408,2.68273401399619,1.98501082024188,1.97471819896177,1.31333971263276,1.4592385718254,1.46199987425332,1.3173006917463,1.07365135008297,1.05144974282064,1.02904612379284,0.991256348951394,1.32225283331772,0.213288250535234,0.928946687441754,2.44848176511977,1.21010114774006,1.11189021922435,1.90225626112559,0.949058123089023,0.988193728344065,0.754005626400808,0.994782360205754,1.55971269695296,1.79763881730844,0.864552199498777,0.597423819763102,1.32767530667157,1.82797620175566,1.1270773567308,2.03651327845314,3.87904974335251,2.24434623649019,2.78240763346732,5.16635517928608,3.29697328466887,3.82531208157582,0,0.83422552858047,0.589676985339609,0.674586337154561,0.811440485554012,0.241177159752417,0.763877555344259,1.43848068725405,0.972811360650212,0.823684239564244,1.43768206527355,0.744281895337007,0.936113019343682,1.26289438973556,0.896987067609561,0.482443521363367,3.32555742299888,0.189491411770485,0.651859905768103,1.86719594352707,2.58159273117352,4.18765643604539,5.47500374037832,3.90267295715598,3.62560831444239,2.21464689648775,3.6674596791222,5.89907932976657,2.76295970985433,2.89298117163023,0,0,1.47529281905711,1.37968373152366,1.60550589987792,1.64096361229084,0.163934945376675,1.00988370881749,1.26203287766503,0.780877488593277,1.29254038639679,1.43381278771531,1.11399337041197,1.69845918473299,0.404810701674894,1.75353514746787,1.18586333383957,3.85585579706168,2.41298144854057,2.31485284767432,2.44330439030364,2.8044920905331,0,2.42780636154981,0.906970670894253,2.26326095707078,3.54362271456927,3.07435147943927,1.55056975900933,2.18120237686503,1.06949213515416,2.84433082142234,4.21674434299995,2.06271086496374,2.7235168460303,0.36012218806262,1.03486947026204,1.50035924522115,1.41872186913819,1.96205699362278,3.62007845324666,2.43571959291679,0.704015124191131,1.90648863777438,1.32317038832977,3.79238381765404,4.35953952078945,2.95533332147964,2.38744688006273,3.77524069413641,1.7488850197791,2.03967832211561,1.19609616558497,2.06386867963222,2.22233432843654,0.376736914009382,0.820165366326151,2.0590035588587,1.18984900995699,4.05859211738608,2.48759952847963,0,0.632671987162271,1.62655573701479,2.16010681643603,2.71814784818809,1.9652630737156,2.83215127408124,3.05817786183743,1.83229159388821,1.29614973291793,5.59205381778233,1.12738587736838,1.19613236835183,0.66183396182839,0.388902376688095,1.16243841129958,0.675824501963113,0.352071715937262,1.5624526181274,4.08951443260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| |||
|short_description=p2@Nbeal2 | |||
}} |
Revision as of 16:57, 14 September 2013
Short description: | p2@Nbeal2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nbeal2_5end |
Coexpression cluster: | NA |
Association with transcript: | -8bp_to_ENSMUST00000133191, ENSMUST00000167320, NM_183276, uc009rul.2, uc012hbk.1_5end |
EntrezGene: | Nbeal2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory system | 2.85e-12 | 42 |
respiratory tract | 1.07e-11 | 41 |
segment of respiratory tract | 4.81e-09 | 27 |
gland of gut | 2.43e-08 | 24 |
pharynx | 2.74e-08 | 24 |
upper respiratory tract | 2.74e-08 | 24 |
chordate pharynx | 2.74e-08 | 24 |
pharyngeal arch system | 2.74e-08 | 24 |
pharyngeal region of foregut | 2.74e-08 | 24 |
craniocervical region | 8.15e-08 | 36 |
thymus | 8.87e-08 | 23 |
neck | 8.87e-08 | 23 |
respiratory system epithelium | 8.87e-08 | 23 |
hemolymphoid system gland | 8.87e-08 | 23 |
pharyngeal epithelium | 8.87e-08 | 23 |
thymic region | 8.87e-08 | 23 |
pharyngeal gland | 8.87e-08 | 23 |
entire pharyngeal arch endoderm | 8.87e-08 | 23 |
thymus primordium | 8.87e-08 | 23 |
early pharyngeal endoderm | 8.87e-08 | 23 |
anterior region of body | 2.89e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.