FFCP PHASE1:Hg19::chr1:158323158..158323175,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=913 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1638 | |||
|TSSclassifier=strong | |||
|UniProt=E7ET31 | |||
|association_with_transcript=-78bp_to_ENST00000434258,uc010pid.1_5end | |||
|coexpression_cluster_id=C46 | |||
|description=CAGE_peak_13_at_CD1E_5end | |||
|id=chr1:158323158..158323175,+ | |||
|ontology_enrichment_celltype=CL:0000242!2.90e-12!2;CL:0000084!1.14e-08!25;CL:0000827!1.14e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0000084;5.06e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,5.06e-09,25;CL:0000827,5.06e-09,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!2.40e-07!51;DOID:0060083!2.40e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.59e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.59e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0002370!4.11e-23!4;UBERON:0005058!4.11e-23!4;UBERON:0009113!4.11e-23!4;UBERON:0003295!4.11e-23!4;UBERON:0005562!4.11e-23!4;UBERON:0002372!6.40e-23!1;UBERON:0001961!6.40e-23!1;UBERON:0001744!6.40e-23!1;UBERON:0001735!6.40e-23!1;UBERON:0001042!1.91e-20!10;UBERON:0009145!1.91e-20!10;UBERON:0006562!1.17e-18!11;UBERON:0003351!9.04e-16!6;UBERON:0004177!1.15e-13!7;UBERON:0001557!4.22e-11!19;UBERON:0000974!7.40e-10!10;UBERON:0003408!7.40e-10!10;UBERON:0009722!4.80e-09!11;UBERON:0007690!4.80e-09!11;UBERON:0008814!7.20e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;4.22e-98;2!UBERON:0005058;4.22e-98;2!UBERON:0009113;4.22e-98;2!UBERON:0004177;4.05e-40;5!UBERON:0005057;4.05e-40;5!UBERON:0000077;2.30e-08;27!UBERON:0002405;2.30e-08;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.47e-50,4;UBERON:0005058,8.47e-50,4;UBERON:0009113,8.47e-50,4;UBERON:0003295,8.47e-50,4;UBERON:0005562,8.47e-50,4;UBERON:0003351,1.17e-33,6;UBERON:0004177,4.86e-29,7;UBERON:0005057,4.86e-29,7;UBERON:0000974,1.04e-20,10;UBERON:0003408,1.04e-20,10;UBERON:0001042,1.04e-20,10;UBERON:0009145,1.04e-20,10;UBERON:0006562,6.17e-19,11;UBERON:0009722,6.17e-19,11;UBERON:0007690,6.17e-19,11;UBERON:0008814,5.09e-12,18;UBERON:0001557,1.91e-11,19;UBERON:0004807,4.21e-08,28;UBERON:0000077,7.40e-08,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.3075388992756,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.13159789174419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.1648565819643,1.48979314310059,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p13@CD1E | |||
}} |
Revision as of 21:35, 10 January 2014
Short description: | p13@CD1E |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_CD1E_5end |
Coexpression cluster: | C46_acute_Hodgkin_thymus_CD8_chronic_CD4_merkel |
Association with transcript: | -78bp_to_ENST00000434258, uc010pid.1_5end |
EntrezGene: | CD1E |
HGNC: | 1638 |
UniProt: | E7ET31 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 5.06e-09 | 25 |
pro-T cell | 5.06e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
thymus | 8.47e-50 | 4 |
hemolymphoid system gland | 8.47e-50 | 4 |
thymic region | 8.47e-50 | 4 |
pharyngeal gland | 8.47e-50 | 4 |
thymus primordium | 8.47e-50 | 4 |
pharyngeal epithelium | 1.17e-33 | 6 |
hemopoietic organ | 4.86e-29 | 7 |
immune organ | 4.86e-29 | 7 |
neck | 1.04e-20 | 10 |
gland of gut | 1.04e-20 | 10 |
chordate pharynx | 1.04e-20 | 10 |
pharyngeal region of foregut | 1.04e-20 | 10 |
pharynx | 6.17e-19 | 11 |
entire pharyngeal arch endoderm | 6.17e-19 | 11 |
early pharyngeal endoderm | 6.17e-19 | 11 |
pharyngeal arch system | 5.09e-12 | 18 |
upper respiratory tract | 1.91e-11 | 19 |
respiratory system epithelium | 4.21e-08 | 28 |
mixed endoderm/mesoderm-derived structure | 7.40e-08 | 29 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.59e-07 | 8 |