FFCP PHASE1:Hg19::chr10:131488786..131488807,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_at_chr10:131488786..131488807,+ | |||
|id=chr10:131488786..131488807,+ | |||
|ontology_enrichment_celltype=CL:0002537!1.13e-15!5;CL:0002536!2.72e-10!2;CL:0000349!1.93e-07!3;CL:0002577!1.93e-07!3;CL:0002541!2.19e-07!3;CL:0000239!2.32e-07!3;CL:1000615!2.32e-07!3;CL:0002306!2.32e-07!3;CL:0000767!2.97e-07!3;CL:0002603!3.16e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000349;3.83e-42;19!CL:0002537;2.22e-40;5!CL:0002577;8.00e-18;3!CL:0002541;1.12e-17;3!CL:0000134;3.89e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.83e-42,19;CL:0002537,2.22e-40,5;CL:0002577,8.00e-18,3;CL:0002541,1.12e-17,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.29e-46!14;UBERON:0000158!2.29e-46!14;UBERON:0000478!4.39e-27!24;UBERON:0000305!5.23e-24!7;UBERON:0003124!5.66e-24!7;UBERON:0004871!4.20e-21!8;UBERON:0001987!3.92e-19!4;UBERON:0004340!3.92e-19!4;UBERON:0004923!2.30e-11!57;UBERON:0000476!2.19e-07!3;UBERON:0000920!2.19e-07!3;UBERON:0006853!2.32e-07!3;UBERON:0007685!2.32e-07!3;UBERON:0004134!2.32e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;5.64e-45;10!UBERON:0000158;5.64e-45;10!UBERON:0000478;1.33e-33;24!UBERON:0000305;3.16e-29;7!UBERON:0003124;1.12e-17;3!UBERON:0000920;1.12e-17;3!UBERON:0001987;1.00e-13;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,9.13e-57,14;UBERON:0000158,9.13e-57,14;UBERON:0000478,1.33e-33,24;UBERON:0000305,3.16e-29,7;UBERON:0003124,4.21e-29,7;UBERON:0004871,9.81e-26,8;UBERON:0000920,1.12e-17,3;UBERON:0001987,1.00e-13,4;UBERON:0004340,1.00e-13,4;UBERON:0004923,7.62e-13,66 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.24378600024763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9822462979337,0,3.07160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55200927785536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:131488786..131488807,+ | |||
}} |
Revision as of 05:37, 11 January 2014
Short description: | p@chr10:131488786..131488807, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:131488786..131488807, + |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.83e-42 | 19 |
amnion mesenchymal stem cell | 2.22e-40 | 5 |
placental epithelial cell | 8.00e-18 | 3 |
chorionic membrane mesenchymal stem cell | 1.12e-17 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 9.13e-57 | 14 |
membranous layer | 9.13e-57 | 14 |
extraembryonic structure | 1.33e-33 | 24 |
amnion | 3.16e-29 | 7 |
chorion | 4.21e-29 | 7 |
somatic layer of lateral plate mesoderm | 9.81e-26 | 8 |
egg chorion | 1.12e-17 | 3 |
placenta | 1.00e-13 | 4 |
allantois | 1.00e-13 | 4 |
organ component layer | 7.62e-13 | 66 |