FFCP PHASE1:Hg19::chr11:115064845..115064863,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23705 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5951 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-15bp_to_ENST00000543375_5end | |||
|description=CAGE_peak_6_at_CADM1_5end | |||
|id=chr11:115064845..115064863,- | |||
|ontology_enrichment_celltype=CL:0002620!1.72e-19!23;CL:0002551!3.49e-13!6;CL:0000080!1.03e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000084;4.50e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,9.77e-09,52;CL:0000542,1.43e-08,53;CL:0000051,1.43e-08,53;CL:0000084,4.41e-07,25;CL:0000827,4.41e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0004140;4.69e-19;1 | |||
|ontology_enrichment_disease=DOID:0060058!5.30e-13!10;DOID:17!2.15e-09!5;DOID:450!2.15e-09!5;DOID:66!2.15e-09!5;DOID:423!2.15e-09!5;DOID:0080000!2.15e-09!5;DOID:11722!2.15e-09!5 | |||
|ontology_enrichment_disease_v019=DOID:4960;2.97e-19;1!DOID:0070004;2.97e-19;1!DOID:0060060;4.69e-19;1!DOID:0060061;4.69e-19;1!DOID:8691;4.69e-19;1!DOID:0060058;7.09e-17;10 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,2.71e-19,1;DOID:0070004,2.71e-19,1;DOID:0060060,3.91e-19,1;DOID:0060061,3.91e-19,1;DOID:8691,3.91e-19,1;DOID:0060058,6.54e-17,10;DOID:2531,6.60e-09,51;DOID:0060083,6.60e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0002097!1.92e-10!40;UBERON:0002199!4.36e-09!45;UBERON:0002416!4.36e-09!45;UBERON:0002067!7.82e-09!9;UBERON:0004016!7.82e-09!9;UBERON:0010083!7.82e-09!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;2.97e-19;1!UBERON:0002331;4.85e-17;10!UBERON:0002390;3.80e-14;32!UBERON:0000178;1.39e-11;15!UBERON:0000179;1.39e-11;15!UBERON:0000463;1.39e-11;15!UBERON:0002193;8.25e-08;42!UBERON:0000478;1.87e-07;24!UBERON:0002371;6.35e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,3.25e-19,1;UBERON:0002331,4.98e-17,10;UBERON:0000358,4.98e-17,10;UBERON:0000307,4.98e-17,10;UBERON:0000091,4.98e-17,10;UBERON:0000087,4.98e-17,10;UBERON:0007010,4.98e-17,10;UBERON:0007806,4.98e-17,10;UBERON:0008780,4.98e-17,10;UBERON:0005728,4.98e-17,10;UBERON:0000178,1.42e-11,15;UBERON:0000179,1.42e-11,15;UBERON:0000463,1.42e-11,15;UBERON:0000478,1.89e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0.323745888736263,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0.179389635688862,0.213557388818567,0.211931901159562,0,0,0,0,0,0,0.252433774244115,0.552299391853796,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,6.75695884329714,0,0,0,0,0,0,0,0,0,0,0,0,3.33410970433911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.44781693020933,7.41383633679017,5.53436332378913,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57732412567589,0.279282401272254,0,0,0,0,0,1.07493555978762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.10207690781571,4.50632614009315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,1.59989916683944,0,3.61651457287713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.452888530700021,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672791175483681,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@CADM1 | |||
}} |
Revision as of 10:27, 11 January 2014
Short description: | p6@CADM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CADM1_5end |
Coexpression cluster: | NA |
Association with transcript: | -15bp_to_ENST00000543375_5end |
EntrezGene: | CADM1 |
HGNC: | 5951 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 9.77e-09 | 52 |
lymphocyte | 1.43e-08 | 53 |
common lymphoid progenitor | 1.43e-08 | 53 |
T cell | 4.41e-07 | 25 |
pro-T cell | 4.41e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 3.25e-19 | 1 |
umbilical cord | 4.98e-17 | 10 |
blastocyst | 4.98e-17 | 10 |
blastula | 4.98e-17 | 10 |
bilaminar disc | 4.98e-17 | 10 |
inner cell mass | 4.98e-17 | 10 |
cleaving embryo | 4.98e-17 | 10 |
connecting stalk | 4.98e-17 | 10 |
inner cell mass derived epiblast | 4.98e-17 | 10 |
extraembryonic mesoderm | 4.98e-17 | 10 |
blood | 1.42e-11 | 15 |
haemolymphatic fluid | 1.42e-11 | 15 |
organism substance | 1.42e-11 | 15 |
extraembryonic structure | 1.89e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 2.71e-19 | 1 |
myeloma | 2.71e-19 | 1 |
non-Hodgkin lymphoma | 3.91e-19 | 1 |
cutaneous T cell lymphoma | 3.91e-19 | 1 |
mycosis fungoides | 3.91e-19 | 1 |
lymphoma | 6.54e-17 | 10 |
hematologic cancer | 6.60e-09 | 51 |
immune system cancer | 6.60e-09 | 51 |