FFCP PHASE1:Hg19::chr12:498415..498492,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5927 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9886 | |||
|TSSclassifier=strong | |||
|UniProt=F5GZ99,F5GZR8,E7EV89 | |||
|association_with_transcript=0bp_to_ENST00000535014,ENST00000543507,ENST00000544760_5end | |||
|coexpression_cluster_id=C176 | |||
|description=CAGE_peak_1_at_KDM5A_5end | |||
|id=chr12:498415..498492,- | |||
|ontology_enrichment_celltype=CL:0000738!7.92e-39!140;CL:0002031!9.52e-31!124;CL:0002087!6.53e-29!119;CL:0000037!1.15e-27!172;CL:0000566!1.15e-27!172;CL:0000988!7.71e-25!182;CL:0002032!1.16e-24!165;CL:0000837!1.16e-24!165;CL:0000766!3.12e-18!76;CL:0000838!3.51e-16!52;CL:0002057!5.57e-16!42;CL:0000542!6.33e-16!53;CL:0000051!6.33e-16!53;CL:0000860!1.49e-15!45;CL:0000839!2.64e-14!70;CL:0000557!1.29e-13!71;CL:0002009!3.55e-12!65;CL:0002194!7.42e-12!63;CL:0000576!7.42e-12!63;CL:0000040!7.42e-12!63;CL:0000559!7.42e-12!63;CL:0000791!1.38e-10!18;CL:0000789!1.38e-10!18;CL:0002420!1.38e-10!18;CL:0002419!1.38e-10!18;CL:0000790!1.38e-10!18;CL:0000763!2.33e-10!112;CL:0000049!2.33e-10!112;CL:0000084!2.70e-08!25;CL:0000827!2.70e-08!25;CL:0000236!1.07e-07!14;CL:0000945!1.53e-07!24;CL:0000826!1.53e-07!24;CL:0000625!2.01e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.48e-12;33!CL:0002057;3.48e-12;33!CL:0000791;1.48e-10;18!CL:0000789;1.48e-10;18!CL:0002419;1.48e-10;18!CL:0002087;2.56e-10;104!CL:0000542;6.60e-10;53!CL:0000576;1.65e-09;48!CL:0000473;1.41e-08;39!CL:0000234;1.41e-08;39!CL:0000766;2.02e-08;69!CL:0000738;2.34e-08;136!CL:0000084;2.62e-08;25!CL:0000236;5.60e-08;13!CL:0000945;1.44e-07;24!CL:0000625;2.13e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.92e-39,136;CL:0002031,2.64e-31,120;CL:0002087,1.85e-29,115;CL:0000037,6.25e-28,168;CL:0000988,9.02e-26,177;CL:0002032,6.58e-25,161;CL:0000837,6.58e-25,161;CL:0000766,8.14e-19,72;CL:0000838,3.51e-16,52;CL:0000860,5.57e-16,42;CL:0002057,5.57e-16,42;CL:0000542,6.33e-16,53;CL:0000051,6.33e-16,53;CL:0000839,8.87e-15,66;CL:0000557,4.76e-14,67;CL:0000473,1.41e-13,48;CL:0000234,1.41e-13,48;CL:0002009,1.35e-12,61;CL:0002194,2.80e-12,59;CL:0000576,2.80e-12,59;CL:0000040,2.80e-12,59;CL:0000559,2.80e-12,59;CL:0000791,1.38e-10,18;CL:0000789,1.38e-10,18;CL:0002420,1.38e-10,18;CL:0002419,1.38e-10,18;CL:0000790,1.38e-10,18;CL:0000763,1.72e-10,108;CL:0000049,1.72e-10,108;CL:0000084,2.70e-08,25;CL:0000827,2.70e-08,25;CL:0000236,1.07e-07,14;CL:0000945,1.53e-07,24;CL:0000826,1.53e-07,24;CL:0000625,2.01e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;9.01e-12;42!CL:0000790;1.48e-10;18!CL:0000051;6.60e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.59e-18!102;UBERON:0003061!3.59e-18!102;UBERON:0002193!4.22e-16!112;UBERON:0007023!3.20e-12!115;UBERON:0002371!3.31e-10!80;UBERON:0001474!1.04e-08!86;UBERON:0000178!9.80e-08!15;UBERON:0000179!9.80e-08!15;UBERON:0000463!9.80e-08!15;UBERON:0002405!3.12e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.67e-08;15!UBERON:0000179;8.67e-08;15!UBERON:0000463;8.67e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.51e-18,98;UBERON:0003061,1.51e-18,98;UBERON:0002193,2.26e-16,108;UBERON:0007023,5.96e-12,114;UBERON:0002405,4.42e-11,93;UBERON:0002371,1.92e-10,76;UBERON:0001474,7.20e-09,82;UBERON:0000178,9.80e-08,15;UBERON:0000179,9.80e-08,15;UBERON:0000463,9.80e-08,15;UBERON:0004765,8.91e-07,90 | |||
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| |||
|short_description=p1@KDM5A | |||
}} |
Revision as of 11:23, 11 January 2014
Short description: | p1@KDM5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KDM5A_5end |
Coexpression cluster: | C176_Eosinophils_Neutrophils_Mast_CD14_CD4_Basophils_CD19 |
Association with transcript: | 0bp_to_ENST00000535014, ENST00000543507, ENST00000544760_5end |
EntrezGene: | KDM5A |
HGNC: | 9886 |
UniProt: | F5GZ99F5GZR8E7EV89 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.51e-18 | 98 |
blood island | 1.51e-18 | 98 |
hemolymphoid system | 2.26e-16 | 108 |
adult organism | 5.96e-12 | 114 |
immune system | 4.42e-11 | 93 |
bone marrow | 1.92e-10 | 76 |
bone element | 7.20e-09 | 82 |
blood | 9.80e-08 | 15 |
haemolymphatic fluid | 9.80e-08 | 15 |
organism substance | 9.80e-08 | 15 |
skeletal element | 8.91e-07 | 90 |