FFCP PHASE1:Hg19::chr12:49621641..49621650,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84790 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20768 | |||
|TSSclassifier=strong | |||
|UniProt=F5H5D3 | |||
|association_with_transcript=-58bp_to_ENST00000541364,uc001rts.2,uc010smh.1_5end | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_22_at_TUBA1C_5end | |||
|id=chr12:49621641..49621650,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!1.29e-26!2;UBERON:0002757!1.29e-26!2;UBERON:0010134!1.29e-26!2;UBERON:0002784!1.29e-26!2;UBERON:0005408!1.29e-26!2;UBERON:0001899!1.29e-26!2;UBERON:0000073!3.15e-14!94;UBERON:0001016!3.15e-14!94;UBERON:0003296!8.06e-14!4;UBERON:0010133!8.06e-14!4;UBERON:0001017!1.09e-13!82;UBERON:0005743!5.20e-13!86;UBERON:0000955!1.86e-10!69;UBERON:0006238!1.86e-10!69;UBERON:0001049!4.89e-10!57;UBERON:0005068!4.89e-10!57;UBERON:0006241!4.89e-10!57;UBERON:0007135!4.89e-10!57;UBERON:0001894!2.78e-08!7;UBERON:0006222!2.78e-08!7;UBERON:0003076!4.12e-08!15;UBERON:0003057!4.12e-08!15;UBERON:0007023!9.45e-08!115;UBERON:0001875!1.99e-07!2;UBERON:0006514!1.99e-07!2;UBERON:0004121!2.10e-07!169;UBERON:0002616!3.18e-07!59;UBERON:0000924!3.35e-07!173;UBERON:0006601!3.35e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;3.29e-195;2!UBERON:0002757;3.29e-195;2!UBERON:0010134;3.29e-195;2!UBERON:0005408;3.29e-195;2!UBERON:0001899;3.29e-195;2!UBERON:0003296;1.55e-98;4!UBERON:0010133;1.55e-98;4!UBERON:0002784;1.55e-98;4!UBERON:0001894;4.76e-57;7!UBERON:0000949;1.70e-11;43!UBERON:0002368;1.71e-11;33!UBERON:0002780;1.47e-07;41!UBERON:0001890;1.47e-07;41!UBERON:0002530;7.93e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,3.29e-195,2;UBERON:0002757,3.29e-195,2;UBERON:0010134,3.29e-195,2;UBERON:0005408,3.29e-195,2;UBERON:0001899,3.29e-195,2;UBERON:0003296,1.55e-98,4;UBERON:0010133,1.55e-98,4;UBERON:0002784,1.55e-98,4;UBERON:0001894,4.76e-57,7;UBERON:0006222,4.76e-57,7;UBERON:0002368,1.42e-12,35;UBERON:0002780,1.07e-10,41;UBERON:0001890,1.07e-10,41;UBERON:0003080,1.07e-10,41;UBERON:0006240,1.07e-10,41;UBERON:0000949,4.55e-10,45;UBERON:0000073,1.34e-08,53;UBERON:0002616,1.34e-08,53;UBERON:0001049,3.28e-08,56;UBERON:0005068,3.28e-08,56;UBERON:0006241,3.28e-08,56;UBERON:0007135,3.28e-08,56;UBERON:0002530,5.66e-08,59;UBERON:0003056,1.20e-07,61;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552896299656123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310482014706917,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74991285114801,11.43364655544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p22@TUBA1C | |||
}} |
Revision as of 13:18, 11 January 2014
Short description: | p22@TUBA1C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_TUBA1C_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | -58bp_to_ENST00000541364, uc001rts.2, uc010smh.1_5end |
EntrezGene: | TUBA1C |
HGNC: | 20768 |
UniProt: | F5H5D3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 3.29e-195 | 2 |
regional part of epithalamus | 3.29e-195 | 2 |
secretory circumventricular organ | 3.29e-195 | 2 |
circumventricular organ | 3.29e-195 | 2 |
epithalamus | 3.29e-195 | 2 |
gland of diencephalon | 1.55e-98 | 4 |
neuroendocrine gland | 1.55e-98 | 4 |
regional part of diencephalon | 1.55e-98 | 4 |
diencephalon | 4.76e-57 | 7 |
future diencephalon | 4.76e-57 | 7 |
endocrine gland | 1.42e-12 | 35 |
regional part of forebrain | 1.07e-10 | 41 |
forebrain | 1.07e-10 | 41 |
anterior neural tube | 1.07e-10 | 41 |
future forebrain | 1.07e-10 | 41 |
endocrine system | 4.55e-10 | 45 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |
gland | 5.66e-08 | 59 |
pre-chordal neural plate | 1.20e-07 | 61 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |