FFCP PHASE1:Hg19::chr19:55658687..55658701,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=7138 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11948 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-370bp_to_uc002qiz.3,uc002qja.3_5end | |||
|description=CAGE_peak_8_at_TNNT1_5end | |||
|id=chr19:55658687..55658701,- | |||
|ontology_enrichment_celltype=CL:0000066!6.18e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:0000313;8.61e-12;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,8.62e-12,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!4.04e-21!143;DOID:162!7.42e-18!235;DOID:305!3.39e-17!106;DOID:14566!4.27e-17!239;DOID:299!2.20e-09!25;DOID:0050686!3.57e-08!137 | |||
|ontology_enrichment_disease_v019=DOID:2152;8.61e-12;1!DOID:3371;1.18e-11;1!DOID:4549;1.18e-11;1!DOID:5861;1.18e-11;1!DOID:6496;1.18e-11;1!DOID:6193;3.11e-11;1!DOID:201;1.19e-07;6!DOID:0060100;1.19e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,8.62e-12,1;DOID:3371,9.57e-12,1;DOID:4549,9.57e-12,1;DOID:5861,9.57e-12,1;DOID:6496,9.57e-12,1;DOID:6193,1.97e-11,1;DOID:0050687,3.75e-08,143;DOID:201,1.29e-07,6;DOID:0060100,1.29e-07,6;DOID:0050686,4.22e-07,137 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;8.61e-12;1!UBERON:0001389;3.11e-11;1!UBERON:0000026;3.11e-11;1!UBERON:0008784;3.11e-11;1!UBERON:0006058;3.11e-11;1!UBERON:0003663;3.11e-11;1!UBERON:0004256;3.11e-11;1!UBERON:0004708;3.11e-11;1!UBERON:0002101;3.11e-11;1!UBERON:0004709;3.11e-11;1!UBERON:0002529;3.11e-11;1!UBERON:0010538;3.11e-11;1!UBERON:0003661;3.11e-11;1!UBERON:0010890;3.11e-11;1!UBERON:0002471;3.11e-11;1!UBERON:0001383;3.11e-11;1!UBERON:0010758;3.11e-11;1!UBERON:0010707;3.11e-11;1!UBERON:0000978;3.11e-11;1!UBERON:0002103;3.11e-11;1!UBERON:0001665;3.11e-11;1!UBERON:0003823;3.11e-11;1!UBERON:0000154;3.11e-11;1!UBERON:0010709;3.11e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,8.62e-12,1;UBERON:0005418,2.96e-11,1;UBERON:0001389,2.96e-11,1;UBERON:0000026,2.96e-11,1;UBERON:0008784,2.96e-11,1;UBERON:0006058,2.96e-11,1;UBERON:0003663,2.96e-11,1;UBERON:0004256,2.96e-11,1;UBERON:0004708,2.96e-11,1;UBERON:0002101,2.96e-11,1;UBERON:0004709,2.96e-11,1;UBERON:0002529,2.96e-11,1;UBERON:0010538,2.96e-11,1;UBERON:0003661,2.96e-11,1;UBERON:0010890,2.96e-11,1;UBERON:0002471,2.96e-11,1;UBERON:0001383,2.96e-11,1;UBERON:0004357,2.96e-11,1;UBERON:0004347,2.96e-11,1;UBERON:0005420,2.96e-11,1;UBERON:0005732,2.96e-11,1;UBERON:0010758,2.96e-11,1;UBERON:0010707,2.96e-11,1;UBERON:0000978,2.96e-11,1;UBERON:0002103,2.96e-11,1;UBERON:0001665,2.96e-11,1;UBERON:0003823,2.96e-11,1;UBERON:0000154,2.96e-11,1;UBERON:0010709,2.96e-11,1;UBERON:0005733,2.96e-11,1;UBERON:0005730,2.96e-11,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0.487894824518382,1.72288698817931,0.580969714347592,0.310983165046111,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0.482022059766964,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0.185176890317059,0,0,0,0,0,0,0,0,0.790204397959275,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48335359146061,0.308097234229289,0.307007349452259,0.137836572484531,0,0,0.340906509664404,0.623224249527161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38871292465715,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0.169291777801603,0,0,0,0,0.614481528616916,0,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0.593929361665277,1.53580351049616,0,0,0,0,0.844501632511974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0.628303510868405,0.217294743844016,0,0,0,0,0,0,0,0.392125068635479,0.167821586975843,0,0,0.210998064528027,0.163232808159148,0.706765357169704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0.693373365065693,1.04135843001079,0.293977192243133,0.0870592065804026,0.17472666824203,1.71986032471617,0.0967563312890851,0,0,0,2.73593992743651,0,0,0,0,0.195551382734803,0.0801588202515337,0,0,1.00863292007874,0,0,0,0.372757606696298,0,2.44627570932505,1.46443984837266,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,1.16495949527454,0.0787831823072236,0.164831716762333,0,0,0,0,0,0,0.412618309791701,0,0,0,0,0.335434687599266,0,0,0.422401346077626,0,0,0,0,0.5085370753095,0,0,0,0,0,0,0,0,0,0,0,0.513260513652988,2.11444506695002,0,0.157204305099666,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0.300515217994437,0,0,0,0,0,0,2.00013882331577,0,0,0,0,1.28664954824955,0,0,0,0.244736704506468,0,0,0.877136198314828,0.706756583783524,1.73622634443823,0.506827321959218,0,0,0,0,0,0,0,0,0.737318726261158,0,0,0,0,1.13503190713367,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0.431855182437243,0.9555033757741,0,0,0.348724276104376,0.695433089210318,0,0,0.17071847709395,0,0.430227358820278,0,0,0,0,0,0,3.46751838573156,0,0,1.29485767437579,2.46390736454993,0,0,0,1.19370465096821,0.237840181555137,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0.252332849670158,0,0.126698501011437,0.203977659483963,0.26721740526556,0,0,0.0757786982182394,0,0,0,0.852935927603924,0,0,0,0,0.0636471582781649,0,0.653150243690884,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p8@TNNT1 | |||
}} |
Revision as of 01:08, 21 January 2014
Short description: | p8@TNNT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_8_at_TNNT1_5end |
Coexpression cluster: | NA |
Association with transcript: | -370bp_to_uc002qiz.3, uc002qja.3_5end |
EntrezGene: | TNNT1 |
HGNC: | 11948 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 8.62e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 8.62e-12 | 1 |
hindlimb bud | 2.96e-11 | 1 |
soleus muscle | 2.96e-11 | 1 |
appendage | 2.96e-11 | 1 |
lower limb segment | 2.96e-11 | 1 |
multi-limb segment region | 2.96e-11 | 1 |
hindlimb muscle | 2.96e-11 | 1 |
hindlimb zeugopod muscle | 2.96e-11 | 1 |
paired limb/fin | 2.96e-11 | 1 |
limb | 2.96e-11 | 1 |
pelvic appendage | 2.96e-11 | 1 |
limb segment | 2.96e-11 | 1 |
paired limb/fin segment | 2.96e-11 | 1 |
limb muscle | 2.96e-11 | 1 |
pelvic complex muscle | 2.96e-11 | 1 |
zeugopod | 2.96e-11 | 1 |
muscle of leg | 2.96e-11 | 1 |
paired limb/fin bud | 2.96e-11 | 1 |
limb bud | 2.96e-11 | 1 |
pelvic appendage bud | 2.96e-11 | 1 |
limb/fin field | 2.96e-11 | 1 |
subdivision of organism along appendicular axis | 2.96e-11 | 1 |
appendage girdle complex | 2.96e-11 | 1 |
leg | 2.96e-11 | 1 |
hindlimb | 2.96e-11 | 1 |
triceps surae | 2.96e-11 | 1 |
hindlimb zeugopod | 2.96e-11 | 1 |
posterior region of body | 2.96e-11 | 1 |
pelvic complex | 2.96e-11 | 1 |
limb field | 2.96e-11 | 1 |
hindlimb/pelvic fin field | 2.96e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 8.62e-12 | 1 |
chondrosarcoma | 9.57e-12 | 1 |
extraosseous chondrosarcoma | 9.57e-12 | 1 |
myxoid chondrosarcoma | 9.57e-12 | 1 |
extraskeletal myxoid chondrosarcoma | 9.57e-12 | 1 |
epithelioid sarcoma | 1.97e-11 | 1 |
cell type cancer | 3.75e-08 | 143 |
connective tissue cancer | 1.29e-07 | 6 |
musculoskeletal system cancer | 1.29e-07 | 6 |
organ system cancer | 4.22e-07 | 137 |