FFCP PHASE1:Hg19::chr2:56104999..56105010,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C395 | |||
|description=CAGE_peak_at_chr2:56104999..56105010,- | |||
|id=chr2:56104999..56105010,- | |||
|ontology_enrichment_celltype=CL:0000222!8.63e-17!119;CL:0002139!4.30e-16!24;CL:0000213!3.14e-14!57;CL:0000215!3.14e-14!57;CL:0002078!8.95e-12!44;CL:0000115!1.89e-11!35;CL:0000071!3.16e-10!18;CL:0002546!3.16e-10!18;CL:0000055!2.23e-09!180;CL:0000057!4.33e-09!75;CL:0000220!5.02e-08!246;CL:0005020!6.12e-08!6;CL:0002138!6.12e-08!6;CL:0005022!6.12e-08!6;CL:0002321!8.45e-08!248;CL:0002548!6.33e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.52e-17;24!CL:0000135;1.39e-14;3!CL:0000388;1.39e-14;3!CL:0002078;9.52e-13;45!CL:0000115;1.09e-12;36!CL:0002138;2.20e-12;6!CL:0000213;9.85e-12;58!CL:0000215;9.85e-12;58!CL:1000306;7.78e-11;4!CL:0002547;7.78e-11;4!CL:0000499;1.57e-09;28!CL:0000153;7.51e-09;9!CL:0000447;7.51e-09;9!CL:0000071;1.73e-08;18!CL:0000327;9.62e-08;15!CL:0000214;1.76e-07;3!CL:0002548;2.68e-07;6!CL:0000746;3.63e-07;3!CL:0002144;4.16e-07;3!CL:0002494;6.41e-07;16!CL:0002615;8.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,6.06e-19,58;CL:0000215,6.06e-19,58;CL:0002139,3.08e-17,24;CL:0002078,5.46e-17,45;CL:0000115,8.57e-16,36;CL:0000135,9.06e-15,3;CL:0000388,9.06e-15,3;CL:0000222,4.96e-13,121;CL:0005020,1.29e-12,6;CL:0002138,1.29e-12,6;CL:0005022,1.29e-12,6;CL:1000306,7.69e-11,4;CL:0002547,7.69e-11,4;CL:0000499,1.58e-09,28;CL:0000153,7.54e-09,9;CL:0000447,7.54e-09,9;CL:0000071,1.41e-08,18;CL:0002546,1.41e-08,18;CL:0000057,1.62e-08,76;CL:0000327,1.11e-07,15;CL:0000214,1.76e-07,3;CL:0002144,2.56e-07,3;CL:0002548,3.85e-07,6;CL:0000746,4.05e-07,3;CL:0000513,4.05e-07,3;CL:0002494,8.34e-07,16;CL:0002615,9.92e-07,3 | |||
|ontology_enrichment_development_v019=CL:0005022;2.20e-12;6!CL:0002546;1.73e-08;18!CL:0000513;3.63e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!4.19e-23!84;UBERON:0000055!8.14e-20!69;UBERON:0002049!1.76e-19!79;UBERON:0007798!1.76e-19!79;UBERON:0004535!8.08e-19!110;UBERON:0001009!1.40e-18!113;UBERON:0001981!2.13e-16!60;UBERON:0007500!2.13e-16!60;UBERON:0004537!2.13e-16!60;UBERON:0006965!2.13e-16!60;UBERON:0003914!1.61e-15!118;UBERON:0001637!1.13e-12!42;UBERON:0003509!1.13e-12!42;UBERON:0004572!1.13e-12!42;UBERON:0000490!1.97e-11!138;UBERON:0006914!2.84e-10!25;UBERON:0001986!3.16e-10!18;UBERON:0004638!3.16e-10!18;UBERON:0004852!3.16e-10!18;UBERON:0000477!3.80e-10!286;UBERON:0004111!2.88e-09!241;UBERON:0000487!5.28e-09!22;UBERON:0004573!5.68e-09!33;UBERON:0004571!5.68e-09!33;UBERON:0000947!7.57e-08!21;UBERON:0010191!7.57e-08!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.39e-14;3!UBERON:0000043;1.39e-14;3!UBERON:0007845;1.39e-14;3!UBERON:0006914;2.80e-13;25!UBERON:0004797;7.78e-11;4!UBERON:0000415;7.78e-11;4!UBERON:0007240;7.78e-11;4!UBERON:0005742;7.78e-11;4!UBERON:0005734;7.78e-11;4!UBERON:0004664;7.78e-11;4!UBERON:0004663;7.78e-11;4!UBERON:0001473;2.62e-09;8!UBERON:0004536;2.62e-09;8!UBERON:0006558;2.62e-09;8!UBERON:0000487;3.97e-09;22!UBERON:0000055;1.56e-08;65!UBERON:0004638;1.73e-08;18!UBERON:0001986;1.73e-08;18!UBERON:0004852;1.73e-08;18!UBERON:0004457;2.01e-08;9!UBERON:0000042;2.01e-08;9!UBERON:0006915;1.76e-07;3!UBERON:0007616;1.76e-07;3!UBERON:0002217;1.76e-07;3!UBERON:0002018;1.76e-07;3!UBERON:0002465;1.87e-07;10!UBERON:0000490;2.22e-07;33!UBERON:0010523;4.16e-07;3!UBERON:0001915;4.16e-07;3!UBERON:0001982;4.16e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,9.06e-15,3;UBERON:0000043,9.06e-15,3;UBERON:0007845,9.06e-15,3;UBERON:0006914,2.06e-13,25;UBERON:0004535,2.80e-13,109;UBERON:0001009,8.54e-13,112;UBERON:0004872,1.10e-11,83;UBERON:0000055,1.38e-11,68;UBERON:0002049,3.58e-11,78;UBERON:0007798,3.58e-11,78;UBERON:0000415,7.69e-11,4;UBERON:0007240,7.69e-11,4;UBERON:0005742,7.69e-11,4;UBERON:0005734,7.69e-11,4;UBERON:0004664,7.69e-11,4;UBERON:0004663,7.69e-11,4;UBERON:0001473,1.77e-09,8;UBERON:0004536,1.77e-09,8;UBERON:0006558,1.77e-09,8;UBERON:0003914,2.14e-09,117;UBERON:0000487,3.04e-09,22;UBERON:0004638,1.41e-08,18;UBERON:0001986,1.41e-08,18;UBERON:0004852,1.41e-08,18;UBERON:0002465,1.37e-07,10;UBERON:0006915,1.76e-07,3;UBERON:0007616,1.76e-07,3;UBERON:0002217,1.76e-07,3;UBERON:0002018,1.76e-07,3;UBERON:0010523,2.56e-07,3;UBERON:0001915,2.56e-07,3;UBERON:0001982,2.56e-07,3;UBERON:0007500,4.78e-07,59;UBERON:0001981,4.78e-07,59;UBERON:0004537,4.78e-07,59;UBERON:0006965,4.78e-07,59 | |||
|phase1_expression=0.908391896352783,0.856402095563933,0.563817616383885,1.0007329835313,1.78784437770915,0.872338524100369,0,0,0.261185628199839,0,0,0.218441372130172,0,0.123766352960047,0.662794751455832,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739508020333575,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1903433156981,1.34140171940727,0,0.722878304769133,3.50936537445123,5.93870727739377,0,0.486634870302636,0,0,0.351339142772504,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,1.13061588384802,0,0.825354125820202,1.8809546988313,0.775250277507987,0.71153252537342,1.67360306382335,0.402829317109147,4.56163263431108,1.95249646038536,0.735326160691737,2.43042584364528,1.16089646769304,0.44905874525234,0.675668882899933,0,0,0.549605231791222,0,0,0,1.49091585508596,1.51956613997496,0.264818361626438,4.30254931123221,1.41867352879343,2.24271040056923,1.06748995729705,0.74000264525148,0.311211035399766,0.404132016209064,1.30769522490767,0.151357427644931,0.576175924479999,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0.567160915800105,0.179389635688862,2.77624605464138,1.48352330811693,0,0.412210116953756,0,0,0.168776332241266,0.194874010322397,0.252433774244115,0.184099797284599,1.61646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,1.44331342025273,0.115930404975077,0,1.73239737313289,2.31492756288305,2.85381228351897,0,0,0,0,0,0.93733833986777,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57191197463259,0.542621605391443,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0.415941723061614,0,0.473107245101804,0.585707074963566,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0.496215615637554,0.306923946576125,0.841980283299221,0.512556597022804,0.511707249066704,0.321707842287215,0,0,0,0,0,0,0,0.40101294060657,0,0.114814448164607,0,0.393373244878272,0,0,0,0,0,0,0,1.94324324491925,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0,0,0,0,0.107420244868274,0.290033387828457,0,0.0890320356467374,0.165284915360978,0,0,0,0,0.31481234683064,0.6970372701606,0.616067160352178,0,0,0,0.429374660225974,0,0,1.5250415513906,0,0.855877976067841,0,0.78494864019923,0.179872457583315,0.274537029736055,0.353437207037059,0,0,0,0,0.487426979262569,1.05650146756755,0,0.565621727814851,0,0,0.66343897524122,0.876901770507525,0,0,0.405820753925408,0.30982349809975,1.40847801266121,0.143411352204052,0.0982490410131212,0.35667105148125,0,4.43326034125095,5.26871828735843,0,0,0.192444225451024,0,0,0,0,0,0.443430153536676,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0.111308705022906,0,0,0.996239941255349,0,0,0.102268682502155,0,0,0.0898683511473268,0,0,0.197286811273867,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0,0.569710279235006,0,0,0,0.638002319463839,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.34945333648406,0,0,0,0.0821154570532092,0,0,0.225980740780532,0.411125773940253,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0.199679000498991,0,0,0,1.08089965062721,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.537862017998534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.320362237703084,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0,0,0.110929051536852,0,0,0.124980407962107,0,0,0,0,0,0,0.467426619694449,0,0.568209015825267,0.754703705257725,1.77962244319307,0,0.453692771289717,0.15543720058278,0.443565449968902,0.159296767163702,0,0,0.414706207840855,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0,0,0.343395705182793,0.336749488765919,0,0,0.214441591374926,0,0,0.231522474323834,0.244736704506468,0.358177682162975,4.01441881309264,0.438568099157414,0.176689145945881,0,1.18259708457151,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0.366857197043358,0.115525666150338,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0.496211178389294,0,1.02209942111676,0,0,0,0,0.177404740325278,0,0.514464028312255,0,0,0.118193840883968,0,0.078493092850514,0.157115589916002,0,0,0.215927591218621,0,0.142953088353313,0,0,0,0.801711364730253,0,0.51215543128185,0,0,0,0,0.423387050190929,0.4582137370881,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,1.85997509083376,3.69740502905135,2.16313281061895,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0.127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| |||
|short_description=p@chr2:56104999..56105010,- | |||
}} |
Revision as of 03:16, 21 January 2014
Short description: | p@chr2:56104999..56105010, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr2:56104999..56105010, - |
Coexpression cluster: | C395_Synoviocyte_Cardiac_Fibroblast_mesothelioma_Endothelial_Chondrocyte_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 6.06e-19 | 58 |
barrier cell | 6.06e-19 | 58 |
endothelial cell of vascular tree | 3.08e-17 | 24 |
meso-epithelial cell | 5.46e-17 | 45 |
endothelial cell | 8.57e-16 | 36 |
fibrocyte | 9.06e-15 | 3 |
tendon cell | 9.06e-15 | 3 |
mesodermal cell | 4.96e-13 | 121 |
lymphangioblast | 1.29e-12 | 6 |
endothelial cell of lymphatic vessel | 1.29e-12 | 6 |
vascular lymphangioblast | 1.29e-12 | 6 |
fibroblast of tunica adventitia of artery | 7.69e-11 | 4 |
fibroblast of the aortic adventitia | 7.69e-11 | 4 |
stromal cell | 1.58e-09 | 28 |
GAG secreting cell | 7.54e-09 | 9 |
carbohydrate secreting cell | 7.54e-09 | 9 |
blood vessel endothelial cell | 1.41e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.41e-08 | 18 |
fibroblast | 1.62e-08 | 76 |
extracellular matrix secreting cell | 1.11e-07 | 15 |
synovial cell | 1.76e-07 | 3 |
capillary endothelial cell | 2.56e-07 | 3 |
cardiac fibroblast | 3.85e-07 | 6 |
cardiac muscle cell | 4.05e-07 | 3 |
cardiac muscle myoblast | 4.05e-07 | 3 |
cardiocyte | 8.34e-07 | 16 |
adipocyte of omentum tissue | 9.92e-07 | 3 |