FFCP PHASE1:Hg19::chr2:56144851..56144902,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C395 | |||
|description=CAGE_peak_at_chr2:56144851..56144902,- | |||
|id=chr2:56144851..56144902,- | |||
|ontology_enrichment_celltype=CL:0000222!9.73e-22!119;CL:0002139!1.05e-15!24;CL:0000213!1.15e-14!57;CL:0000215!1.15e-14!57;CL:0000071!1.66e-11!18;CL:0002546!1.66e-11!18;CL:0000220!2.18e-11!246;CL:0002321!3.34e-11!248;CL:0002078!4.59e-11!44;CL:0000055!5.08e-11!180;CL:0000115!5.13e-11!35;CL:0000680!6.17e-09!57;CL:0000056!6.17e-09!57;CL:0000355!6.17e-09!57;CL:0000187!8.30e-09!54;CL:0000393!1.28e-07!60;CL:0000211!1.28e-07!60;CL:0000076!1.40e-07!62;CL:0000057!1.42e-07!75;CL:0000183!1.94e-07!59;CL:1000413!4.32e-07!9;CL:0000359!7.12e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.10e-24;24!CL:0000071;1.89e-17;18!CL:0000115;8.37e-16;36!CL:0000213;4.49e-14;58!CL:0000215;4.49e-14;58!CL:0002078;9.04e-13;45!CL:1000413;4.81e-10;9!CL:0002138;2.79e-08;6!CL:0000136;1.97e-07;13!CL:0000359;5.44e-07;32!CL:0002494;9.05e-07;16!CL:0000153;9.84e-07;9!CL:0000447;9.84e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.17e-24,24;CL:0000222,3.20e-24,121;CL:0000213,5.64e-24,58;CL:0000215,5.64e-24,58;CL:0000115,1.31e-18,36;CL:0002078,2.55e-18,45;CL:0000071,9.70e-18,18;CL:0002546,9.70e-18,18;CL:0002321,8.70e-11,250;CL:1000413,2.75e-10,9;CL:0000057,1.24e-09,76;CL:0005020,2.97e-08,6;CL:0002138,2.97e-08,6;CL:0005022,2.97e-08,6;CL:0000076,7.25e-08,63;CL:0000359,4.02e-07,32;CL:0002544,6.03e-07,6;CL:0002494,6.17e-07,16 | |||
|ontology_enrichment_development_v019=CL:0002546;1.89e-17;18!CL:0005022;2.79e-08;6!CL:0000222;8.87e-08;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!7.04e-26!84;UBERON:0002049!5.60e-23!79;UBERON:0007798!5.60e-23!79;UBERON:0000055!4.52e-22!69;UBERON:0000477!1.74e-21!286;UBERON:0001981!2.31e-20!60;UBERON:0007500!2.31e-20!60;UBERON:0004537!2.31e-20!60;UBERON:0006965!2.31e-20!60;UBERON:0004535!5.35e-20!110;UBERON:0004111!1.18e-19!241;UBERON:0001009!2.90e-19!113;UBERON:0003914!1.12e-17!118;UBERON:0000483!1.62e-16!309;UBERON:0000119!2.92e-16!312;UBERON:0000025!1.79e-15!194;UBERON:0001637!1.64e-14!42;UBERON:0003509!1.64e-14!42;UBERON:0004572!1.64e-14!42;UBERON:0000490!1.20e-13!138;UBERON:0000468!3.67e-13!659;UBERON:0001986!1.66e-11!18;UBERON:0004638!1.66e-11!18;UBERON:0004852!1.66e-11!18;UBERON:0006914!4.65e-11!25;UBERON:0004573!1.36e-10!33;UBERON:0004571!1.36e-10!33;UBERON:0000487!1.79e-10!22;UBERON:0000467!2.06e-10!625;UBERON:0000480!2.97e-10!626;UBERON:0000475!9.07e-10!365;UBERON:0000947!2.35e-08!21;UBERON:0010191!2.35e-08!21;UBERON:0002385!3.64e-08!63;UBERON:0001015!3.64e-08!63;UBERON:0000383!3.64e-08!63;UBERON:0001134!6.64e-08!61;UBERON:0002036!6.64e-08!61;UBERON:0003082!6.64e-08!61;UBERON:0000481!1.00e-07!347;UBERON:0000948!4.11e-07!24;UBERON:0005498!4.11e-07!24;UBERON:0004140!4.11e-07!24;UBERON:0009881!4.11e-07!24;UBERON:0004141!4.11e-07!24;UBERON:0003084!4.11e-07!24;UBERON:0007005!4.11e-07!24;UBERON:0004139!4.11e-07!24;UBERON:0004291!4.11e-07!24;UBERON:0003915!4.32e-07!9;UBERON:0004700!4.32e-07!9;UBERON:0001917!4.32e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0006914;7.05e-18;25!UBERON:0004638;1.89e-17;18!UBERON:0001986;1.89e-17;18!UBERON:0004852;1.89e-17;18!UBERON:0000487;1.49e-16;22!UBERON:0001637;4.27e-16;42!UBERON:0003509;4.27e-16;42!UBERON:0004572;4.27e-16;42!UBERON:0007500;1.13e-15;56!UBERON:0001981;1.13e-15;56!UBERON:0004537;1.13e-15;56!UBERON:0000055;1.14e-15;65!UBERON:0004573;1.74e-14;33!UBERON:0004571;1.74e-14;33!UBERON:0000947;2.87e-12;21!UBERON:0010191;2.87e-12;21!UBERON:0002049;6.12e-12;75!UBERON:0007798;6.12e-12;75!UBERON:0000490;3.75e-11;33!UBERON:0003915;4.81e-10;9!UBERON:0004700;4.81e-10;9!UBERON:0001917;4.81e-10;9!UBERON:0003914;3.19e-09;74!UBERON:0004535;4.48e-09;109!UBERON:0001009;2.75e-08;112!UBERON:0004457;2.83e-08;9!UBERON:0000042;2.83e-08;9!UBERON:0000948;8.95e-08;22!UBERON:0003688;4.42e-07;6!UBERON:0002358;4.42e-07;6!UBERON:0003684;4.42e-07;6!UBERON:0001178;4.42e-07;6!UBERON:0000025;7.63e-07;93 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,2.42e-34,83;UBERON:0000055,1.12e-30,68;UBERON:0004535,1.27e-29,109;UBERON:0002049,3.01e-29,78;UBERON:0007798,3.01e-29,78;UBERON:0001009,3.29e-28,112;UBERON:0007500,7.73e-27,59;UBERON:0001981,7.73e-27,59;UBERON:0004537,7.73e-27,59;UBERON:0006965,7.73e-27,59;UBERON:0003914,2.56e-26,117;UBERON:0001637,1.57e-20,42;UBERON:0003509,1.57e-20,42;UBERON:0004572,1.57e-20,42;UBERON:0006914,3.03e-18,25;UBERON:0004638,9.70e-18,18;UBERON:0001986,9.70e-18,18;UBERON:0004852,9.70e-18,18;UBERON:0000487,6.28e-17,22;UBERON:0004573,3.61e-15,33;UBERON:0004571,3.61e-15,33;UBERON:0004111,5.62e-14,240;UBERON:0000025,7.02e-13,192;UBERON:0000947,2.51e-12,21;UBERON:0010191,2.51e-12,21;UBERON:0000490,4.17e-11,148;UBERON:0003915,2.75e-10,9;UBERON:0004700,2.75e-10,9;UBERON:0001917,2.75e-10,9;UBERON:0000948,2.09e-09,24;UBERON:0005498,2.09e-09,24;UBERON:0004140,2.09e-09,24;UBERON:0009881,2.09e-09,24;UBERON:0004141,2.09e-09,24;UBERON:0003084,2.09e-09,24;UBERON:0007005,2.09e-09,24;UBERON:0004139,2.09e-09,24;UBERON:0004291,2.09e-09,24;UBERON:0007100,8.07e-08,27;UBERON:0000483,1.14e-07,306;UBERON:0000119,2.19e-07,309;UBERON:0003688,3.82e-07,6;UBERON:0002358,3.82e-07,6;UBERON:0003684,3.82e-07,6;UBERON:0001178,3.82e-07,6;UBERON:0003081,4.15e-07,203 | |||
|phase1_expression=3.99692434395225,4.49611100171065,4.08767771878316,8.00586386825043,5.36353313312745,19.1914475302081,5.06599756336621,0,2.61185628199839,0,0,0.436882744260345,0.791300934685361,0.990130823680373,0.994192127183747,2.6893005858071,3.01347264011988,3.65155045193687,2.43966399395253,0.123121058076788,0.408001382488506,0,0,0,0.125542639594803,0,0,0,0,0,0,0,1.204823675113,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,4.02420515822182,2.81297636055767,5.42158728576849,11.5307719446255,23.6099825906143,2.3858578411533,3.40644409211845,0.189069634328136,0.665188192387692,1.22968699970376,0,0,0,0,0,0,0,0,0,2.58391129576717,1.72046919021225,3.81854551768354,2.82653970962005,7.55098985177831,6.60283300656162,7.52381879532518,4.65150166504792,4.62496141492723,7.02913286805807,10.0707329277287,10.6438094800592,12.935289050053,7.72092468726324,12.1521292182264,6.25098097988558,5.38870494302808,5.63057402416611,0,7.59412527654503,4.946447086121,0,0,0,7.9515512271251,11.143485026483,1.32409180813219,31.5520282823695,5.32002573297536,5.04609840128076,0,2.4666754841716,3.42332138939743,3.77189881795127,5.39424280274414,0.908144565869588,1.72852777344,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.751190294532984,4.53728732640084,3.40840307808838,5.97960688691989,4.23863802319124,3.90118424909723,2.78241828943785,0.515281080091258,0.18611685633159,0.337552664482532,1.55899208257918,3.02920529092937,3.12969655383818,5.01102776138317,3.55009592516614,1.5112814734146,0.339121184620975,0.193260853163297,0.818238361772504,0.286804595389004,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0.236613600079688,0,0.482022059766964,0.661763836394364,0.217879444092406,0,0.539325232640658,0.392442930250692,0,0,1.40241773803446,0.8231480226628,0,0,0,0,0,0,1.20097467208968,0.548751427043128,0,0.100528972411631,0.648119116109707,0.325808305310325,0,0,0.115930404975077,0.821860859650752,7.21832238805369,16.2044929401814,23.0207524203864,0.790204397959275,0,0,0,0,0,0.16798212819886,0.141775097242386,0.626909658919938,0.290633938513962,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87192013766656,0,0.387815147273333,0,0,0,0,0,0,0,3.14551586047925,0.542621605391443,0.823240336780769,0,2.84313558994037,0.791951872933429,0,0,0.399891964728228,0,0,0,0.239624855491583,0,0,0.289562613335158,0.410952645100767,0.179060963239896,0,0,0,0,0,0,1.54657762555539,0,0,0,0,0,0.858840442033979,2.00068208423871,1.35632511849868,3.11956292296211,2.49800584316026,2.05013139544115,2.34282829985426,1.50473049863859,0,0,1.32845119707087,0,0.955719759148911,0,0,0,0,0,0.303127571446259,0,1.81434175997808,3.2254015016441,1.53461973288062,6.17452207752762,3.58789617915963,2.55853624533352,2.89537058058494,11.8734453155993,0,0.710246901252508,0.0821271560138091,0,0.116210378459959,0,3.20810352485256,0.644566922551274,1.03333003348146,0.182091168006717,0.655622074797121,0,0.0770153371044148,0,0,0,1.13733384070897,0.850468526382578,7.1252252313706,1.54227252690289,0,0,0.254876273045038,0,0,0,0,0,0.656029291399411,1.95227036798582,2.57602529119306,0,0,0,0,4.82051789532479,0.193341436584244,0.616194468458578,1.68854042198743,0.275673144969061,0.859361958946189,1.0151168573996,0.426133137080504,0.623224249527161,1.81813406897076,0.576570202095319,0.382838137483752,0.6069466851333,0,8.18512101759664,0.6970372701606,1.23213432070436,0,0,0.37064843820784,1.86062352764589,0,0.949138274156178,6.1001662055624,0.255897791311334,0.42793898803392,1.27281299170375,1.56989728039846,0.539617372749944,1.09814811894422,0.706874414074119,0.202182481573316,0,0,0,7.55511817856982,6.33900880540533,0.136499911407986,3.11091950298168,2.26016233240486,1.10273068709225,5.30751180192976,5.69986150829892,0,0.655894752046633,1.01455188481352,1.8589409885985,1.40847801266121,0.286822704408103,0.982490410131212,0.35667105148125,0,33.1438987417333,38.8567973692684,0,0,0.769776901804097,0.670302275535787,1.08890984861323,3.29503302718727,0.86101074534246,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63714722689409,0,0,0,0.95497793895076,0,0.921482106297696,0,0.140669416410513,1.44701316529778,0,0,5.18044769452781,0,0,0.920418142519393,0,0,0.0898683511473268,0,0,2.46608514092334,0,1.11136990144637,0,0.74214478529481,0,0,0,0.724999575434793,0.455173793141999,1.77977555204936,0,0,0,0,1.77148277162768,1.20596438625408,0,0.442317039724898,0.591095237907095,0.438770794307945,0.10893846351899,1.95193241990045,0.692552326534174,1.82307289355202,0,0,0,1.5950057986596,0,7.99552164027952,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.353830258013357,1.22206028986725,0,0,0,0.741412462787447,0,0.468528891450678,0,0.19566461893209,0,0.394584402849391,0,0.61214552326098,2.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| |||
|short_description=p@chr2:56144851..56144902,- | |||
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Revision as of 03:17, 21 January 2014
Short description: | p@chr2:56144851..56144902, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:56144851..56144902, - |
Coexpression cluster: | C395_Synoviocyte_Cardiac_Fibroblast_mesothelioma_Endothelial_Chondrocyte_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.17e-24 | 24 |
mesodermal cell | 3.20e-24 | 121 |
lining cell | 5.64e-24 | 58 |
barrier cell | 5.64e-24 | 58 |
endothelial cell | 1.31e-18 | 36 |
meso-epithelial cell | 2.55e-18 | 45 |
blood vessel endothelial cell | 9.70e-18 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.70e-18 | 18 |
embryonic cell | 8.70e-11 | 250 |
endothelial cell of artery | 2.75e-10 | 9 |
fibroblast | 1.24e-09 | 76 |
lymphangioblast | 2.97e-08 | 6 |
endothelial cell of lymphatic vessel | 2.97e-08 | 6 |
vascular lymphangioblast | 2.97e-08 | 6 |
squamous epithelial cell | 7.25e-08 | 63 |
vascular associated smooth muscle cell | 4.02e-07 | 32 |
aortic endothelial cell | 6.03e-07 | 6 |
cardiocyte | 6.17e-07 | 16 |