FFCP PHASE1:Hg19::chr2:134325832..134325855,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=344148 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29847 | |||
|TSSclassifier=weak | |||
|UniProt=O14513 | |||
|association_with_transcript=175bp_to_ENST00000409261,NM_207363,NM_207481,uc002ttp.2,uc002ttq.2,uc002ttt.1_5end | |||
|description=CAGE_peak_7_at_NCKAP5_5end | |||
|id=chr2:134325832..134325855,- | |||
|ontology_enrichment_celltype=CL:1000306!9.31e-08!4;CL:0002547!9.31e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0000511;7.36e-18;1!CL:0002625;7.36e-18;1!CL:0000222;7.36e-18;1!CL:0002568;7.36e-18;1!CL:0000216;7.36e-18;1!CL:0000632;8.14e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,6.23e-18,1;CL:0002625,6.23e-18,1;CL:0000216,6.23e-18,1;CL:0002568,1.70e-17,1;CL:0000632,8.62e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3571;7.36e-18;1!DOID:3350;1.33e-09;2!DOID:3307;1.33e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,8.72e-18,1;DOID:3307,9.46e-10,2;DOID:3350,1.44e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0000415!9.31e-08!4;UBERON:0007240!9.31e-08!4;UBERON:0005742!9.31e-08!4;UBERON:0005734!9.31e-08!4;UBERON:0004664!9.31e-08!4;UBERON:0004663!9.31e-08!4;UBERON:0000477!5.71e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;7.36e-18;1!UBERON:0001136;7.36e-18;1!UBERON:0001343;7.36e-18;1!UBERON:0004910;7.36e-18;1!UBERON:0004813;7.36e-18;1!UBERON:0004909;1.33e-09;2!UBERON:0002114;8.14e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,3.16e-18,1;UBERON:0001136,6.23e-18,1;UBERON:0001343,6.23e-18,1;UBERON:0004910,6.23e-18,1;UBERON:0005154,6.23e-18,1;UBERON:0005295,6.23e-18,1;UBERON:0004813,6.23e-18,1;UBERON:0005297,6.23e-18,1;UBERON:0005294,6.23e-18,1;UBERON:0010141,6.23e-18,1;UBERON:0005891,6.23e-18,1;UBERON:0004909,1.22e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0.71153252537342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,1.58891016975863,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0,1.03417372606222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0.114814448164607,0.364182336013434,0.131124414959424,0,0,0.784349769176855,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0,0,0.94443704049192,0,0.308033580176089,0,0,0,0,0.372158369359667,0.632758849437452,0,0,0,0.318203247925937,0,0.179872457583315,0,0,0,0,0,0,0.487426979262569,0,0.682499557039929,0.565621727814851,0,0.551365343546124,0.66343897524122,0,0,0,0,0,0,0,0.0982490410131212,0.35667105148125,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90012867315194,0,0,0.251932747854276,0.306806047506464,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0.144090417154106,0,0,0,0.745515213392595,0,0,0,0.203996435272644,0,0,0,0,0.429765441419957,0,0,0.687481272035051,0,0.199679000498991,0,0,0.53746777989381,1.44119953416961,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0.653174720218818,0,0,0,0,0.58620893471233,0,0,0,0,0,0.213574825135389,1.41483874589699,0,0,0,0,0,0,0.5013797880454,0,0,0,0,0,0.1251909307065,0,0,0,0.138348634936231,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0.73927574994817,0.159296767163702,0,0,0.829412415681711,0.265841714557995,0.521745061811734,0,0,0.406870733204662,0.181848659202559,0,0.464033759878494,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,0,0,1.61116493536703,0,0,4.02194899506392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49131575253029,0.147856086217045,0,0,0,0.0634158101939068,0.546974809018219,0,0.496211178389294,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0.280272163313789,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0.170426809518315,0,0,0,0,0,0,0,0,0,0,1.94284397223656,0,0,0,0,0,0.754814217833368,0,0,0,0,0,0,0,0.4226557275834,0,0,0.128915775947154,0,0,0,0,0.730336388246517,0,0,0.473314686579554,0.0679914901909147,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26940821205835,0,0.332660356546013,0,0,1.9307228228694,0.179650404213174,0,0.244482888365733,0.813792356631477,0,0.402547587182052,0 | |||
|short_description=p7@NCKAP5 | |||
}} |
Revision as of 05:29, 21 January 2014
Short description: | p7@NCKAP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_NCKAP5_5end |
Coexpression cluster: | NA |
Association with transcript: | 175bp_to_ENST00000409261, NM_207363, NM_207481, uc002ttp.2, uc002ttq.2, uc002ttt.1_5end |
EntrezGene: | NCKAP5 |
HGNC: | 29847 |
UniProt: | O14513 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 6.23e-18 | 1 |
seminiferous tubule epithelial cell | 6.23e-18 | 1 |
Sertoli cell | 6.23e-18 | 1 |
mesenchymal stem cell of Wharton's jelly | 1.70e-17 | 1 |
hepatic stellate cell | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
surface | 3.16e-18 | 1 |
mesothelium | 6.23e-18 | 1 |
seminiferous tubule of testis | 6.23e-18 | 1 |
epithelium of male gonad | 6.23e-18 | 1 |
epithelial cord | 6.23e-18 | 1 |
sex cord | 6.23e-18 | 1 |
seminiferous tubule epithelium | 6.23e-18 | 1 |
testis sex cord | 6.23e-18 | 1 |
genital ridge | 6.23e-18 | 1 |
primitive sex cord of indifferent gonad | 6.23e-18 | 1 |
coelomic epithelium | 6.23e-18 | 1 |
epithelium of gonad | 1.22e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 8.72e-18 | 1 |
teratoma | 9.46e-10 | 2 |
mesenchymal cell neoplasm | 1.44e-09 | 2 |