FFCP PHASE1:Hg19::chr2:158114516..158114531,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11227 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4127 | |||
|TSSclassifier=not | |||
|UniProt=A5PKZ1,Q7Z7M9 | |||
|association_with_transcript=176bp_to_NM_014568,uc002tzg.2,uc010zci.1_5end | |||
|coexpression_cluster_id=C1496 | |||
|description=CAGE_peak_4_at_GALNT5_5end | |||
|id=chr2:158114516..158114531,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.70e-21!180;CL:0000057!7.92e-13!75;CL:0000680!1.85e-08!57;CL:0000056!1.85e-08!57;CL:0000355!1.85e-08!57;CL:0000359!2.00e-08!32;CL:0002620!2.55e-08!23;CL:0002371!5.33e-08!591;CL:0000192!1.16e-07!42;CL:0000514!1.16e-07!42;CL:0000187!2.58e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.64e-13;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.71e-15,76;CL:0002620,1.47e-13,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.15e-08;5!DOID:450;1.15e-08;5!DOID:66;1.15e-08;5!DOID:423;1.15e-08;5!DOID:0080000;1.15e-08;5!DOID:11722;1.15e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.20e-08,5;DOID:450,1.20e-08,5;DOID:66,1.20e-08,5;DOID:423,1.20e-08,5;DOID:0080000,1.20e-08,5;DOID:11722,1.20e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!1.14e-13!95;UBERON:0000475!9.50e-10!365;UBERON:0000914!1.02e-09!83;UBERON:0002329!1.02e-09!83;UBERON:0003077!1.02e-09!83;UBERON:0003059!1.02e-09!83;UBERON:0007282!1.02e-09!83;UBERON:0009618!1.02e-09!83;UBERON:0007285!1.02e-09!83;UBERON:0002097!3.41e-09!40;UBERON:0002199!1.05e-08!45;UBERON:0002416!1.05e-08!45;UBERON:0000486!2.40e-08!82;UBERON:0001134!3.37e-07!61;UBERON:0002036!3.37e-07!61;UBERON:0003082!3.37e-07!61;UBERON:0000165!4.71e-07!28;UBERON:0000930!4.71e-07!28;UBERON:0000481!9.33e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0000075;1.77e-10;16!UBERON:0002097;8.40e-10;41!UBERON:0002199;2.72e-09;46!UBERON:0002416;2.72e-09;46!UBERON:0011135;3.30e-09;5!UBERON:0002216;3.30e-09;5!UBERON:0011134;3.30e-09;5!UBERON:0002209;3.30e-09;5!UBERON:0002213;3.30e-09;5!UBERON:0007844;3.30e-09;5!UBERON:0011138;3.30e-09;5!UBERON:0001130;3.30e-09;5!UBERON:0001066;3.30e-09;5!UBERON:0001468;3.30e-09;5!UBERON:0001828;9.71e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,7.82e-14,99;UBERON:0002097,1.25e-12,41;UBERON:0002199,5.57e-12,46;UBERON:0002416,5.57e-12,46;UBERON:0000075,1.69e-10,16;UBERON:0011135,2.81e-09,5;UBERON:0002216,2.81e-09,5;UBERON:0011134,2.81e-09,5;UBERON:0002209,2.81e-09,5;UBERON:0002213,2.81e-09,5;UBERON:0005856,2.81e-09,5;UBERON:0005866,2.81e-09,5;UBERON:0005863,2.81e-09,5;UBERON:0007844,2.81e-09,5;UBERON:0011138,2.81e-09,5;UBERON:0001130,2.81e-09,5;UBERON:0001066,2.81e-09,5;UBERON:0001468,2.81e-09,5;UBERON:0011137,5.74e-08,14;UBERON:0000165,3.66e-07,29;UBERON:0000930,3.66e-07,29;UBERON:0001828,7.86e-07,8 | |||
|phase1_expression=0.54503513781167,0,0,0,0,0.872338524100369,5.06599756336621,0,0,0.491467873003018,0.697801167972428,0,0,3.46545788288131,3.64537113300707,0.672325146451775,1.20538905604795,0.730310090387373,0,0.369363174230364,0,0,1.14494394852423,0.958120975510189,0.125542639594803,0,0,0,0,0,0,0,1.204823675113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89151321907653,0.50133791063589,1.73815822752988,0.795285947051099,3.40644409211845,0.567208902984407,1.55210578223795,0.527008714158756,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.759783069987479,7.94455084879313,2.29469296599051,0,0,1.06748995729705,0.74000264525148,0,0,0.163461903113459,0.756787138224657,0.576175924479999,0,0,0,0,0.117434498643765,0,0,1.22492502752936,0.491337269247072,0.619954687054593,4.75201142912821,1.48360157567134,0,0,0,0.125118519871964,1.10825646193673,1.31693286264251,2.45190236639216,1.65261864797256,1.02088964844019,4.66413052791041,1.06778694409284,1.90738711043606,12.0036438433761,3.09157587715317,8.50213782150576,2.97786970130544,5.40084263172052,3.11798416515836,4.54380793639406,0.920498986422993,1.45481451136931,14.5553932931812,4.23158812556089,1.18692414617341,2.31913023795956,1.90922284413584,2.00763216772303,0,0,0.232387885739037,0.10366105501537,0,0,3.12899064659632,2.57296375277154,0,1.39310378409594,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0.686271241194102,0.548751427043128,0,0.100528972411631,0.462942225792648,0,0,1.44331342025273,0.115930404975077,8.92306076192245,0,0,0,0,0,0,0,0,0,5.71139235876122,0.850650583454319,0.0895585227028483,0,0,0.492663237895943,0,0,0,0,0,0,0,3.4214489204541,0.102827492703324,0,0,0,0,0,1.03417372606222,0,0,0,0,0,0,0,0,0,1.64648067356154,0,0,0,0,0,0,0,0,0,1.19812427745791,0,2.85273810081437,0.868687840005475,0.61642896765115,2.14873155887875,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,2.57652132610194,4.00136416847742,3.7977103317963,1.24782516918484,1.96271887676878,2.52323864054295,0.702848489956279,2.10662269809403,2.27407504055985,0,2.65690239414175,1.29058417979192,0.695068915744663,0,0,0,0,0,0,0,0,0.496215615637554,3.52962538562544,1.68396056659844,0,2.04682899626681,0.160853921143607,0,0,0.177561725313127,1.64254312027618,1.03850885836724,0.348631135379878,0.120859449591622,0.601519410909855,0.552485933615378,0.68888668898764,0.182091168006717,0.131124414959424,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.438519753291869,0.784306353074702,0,0.328014645699706,0,0,0,0,0.574265537996172,0.650060246036521,0,0,0.308097234229289,0,0.137836572484531,0.966782203814463,0.290033387828457,0,0.356128142586949,1.15699440752685,0.768760269460425,1.27612712494584,0.708104465988849,0.929691098594572,8.49993336442728,0,0,0.532306030317022,0.869932992075073,1.11194531462352,1.43124886741991,0.744316738719335,6.01120906965579,1.90630193923825,0,0.42793898803392,0.318203247925937,0,0.359744915166629,0,0.117812402345686,1.2130948894399,1.58510321173008,0.842516912477962,0,1.70599442741899,0,0.272999822815972,0.424216295861138,0,0,2.65375590096488,3.06915619677634,0,1.9676842561399,1.01455188481352,0,0.281695602532241,0.860468113224309,0.0982490410131212,3.5667105148125,0,0.844430541190656,0.658589785919804,0,0,1.05844323998063,0,1.08890984861323,0.188287601553558,0.43050537267123,0,0,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,6.40334199959057,2.46174797895425,0,0,0,0,0.146508179271894,0,0.557216921387392,0,0.47748896947538,0.296964680832639,0.307160702099232,0,0,0.111308705022906,0,0,0,0,0,3.1703291575668,4.30796819113743,4.66559381492711,2.60618218327248,0,0,0,0,0,0,0,0,0,0,0,1.0241410345695,0,0,0,0,0,0,0,1.52581736317083,1.65868889896837,0.886642856860642,0,0,0,0.230850775511391,0,0,0,0,0,0.0915975934018623,0,0,0,1.16348177330109,13.761335297648,9.21493911293376,12.4187974362124,5.123350783553,0.317873157960757,0,0,0.848118428603645,0.432777279484182,0,0.353830258013357,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0,0,0,0.640358984218058,0,1.87317542300338,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.201550417460179,1.80149941771202,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,1.0063040627978,0,0.0524545881349981,0,0.179287339332845,0,0.714695326373367,0,0,0,0.864221491201268,0,0,0.738832686744051,12.4383255903358,0,0,0,0,0,0,0,0.427149650270779,0.157204305099666,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0.573409195690071,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0,0.554805861502613,1.32582103692562,0.754703705257725,6.22867855117575,0.228840068396924,0.453692771289717,0.15543720058278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| |||
|short_description=p4@GALNT5 | |||
}} |
Revision as of 06:08, 21 January 2014
Short description: | p4@GALNT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GALNT5_5end |
Coexpression cluster: | C1496_Fibroblast_Smooth_papillotubular_basal_liposarcoma_tenocyte_mesenchymal |
Association with transcript: | 176bp_to_NM_014568, uc002tzg.2, uc010zci.1_5end |
EntrezGene: | GALNT5 |
HGNC: | 4127 |
UniProt: | A5PKZ1Q7Z7M9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.71e-15 | 76 |
skin fibroblast | 1.47e-13 | 23 |
Ontology term | p-value | n |
---|---|---|
surface structure | 7.82e-14 | 99 |
skin of body | 1.25e-12 | 41 |
integument | 5.57e-12 | 46 |
integumental system | 5.57e-12 | 46 |
subdivision of skeletal system | 1.69e-10 | 16 |
intervertebral cartilage | 2.81e-09 | 5 |
symphysis | 2.81e-09 | 5 |
nonsynovial joint | 2.81e-09 | 5 |
fibrous joint | 2.81e-09 | 5 |
cartilaginous joint | 2.81e-09 | 5 |
developing mesenchymal condensation | 2.81e-09 | 5 |
pre-cartilage condensation | 2.81e-09 | 5 |
cartilaginous condensation | 2.81e-09 | 5 |
cartilage element | 2.81e-09 | 5 |
post-cranial axial skeletal system | 2.81e-09 | 5 |
vertebral column | 2.81e-09 | 5 |
intervertebral disk | 2.81e-09 | 5 |
intervertebral joint | 2.81e-09 | 5 |
axial skeletal system | 5.74e-08 | 14 |
mouth | 3.66e-07 | 29 |
stomodeum | 3.66e-07 | 29 |
gingiva | 7.86e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.20e-08 | 5 |
myotonic disease | 1.20e-08 | 5 |
muscle tissue disease | 1.20e-08 | 5 |
myopathy | 1.20e-08 | 5 |
muscular disease | 1.20e-08 | 5 |
myotonic dystrophy | 1.20e-08 | 5 |