FFCP PHASE1:Hg19::chr2:162762294..162762305,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C121 | |||
|description=CAGE_peak_at_chr2:162762294..162762305,+ | |||
|id=chr2:162762294..162762305,+ | |||
|ontology_enrichment_celltype=CL:0000625!5.73e-28!11;CL:0000791!3.20e-26!18;CL:0000789!3.20e-26!18;CL:0002420!3.20e-26!18;CL:0002419!3.20e-26!18;CL:0000790!3.20e-26!18;CL:0000084!2.70e-22!25;CL:0000827!2.70e-22!25;CL:0000842!5.17e-15!3;CL:0000838!1.54e-13!52;CL:0000542!3.13e-13!53;CL:0000051!3.13e-13!53;CL:0000893!1.48e-11!2;CL:0002489!1.48e-11!2;CL:0000809!1.48e-11!2;CL:0000808!1.48e-11!2;CL:0000894!1.48e-11!2;CL:0000806!1.48e-11!2;CL:0000807!1.48e-11!2;CL:0000805!1.48e-11!2;CL:0002425!1.48e-11!2;CL:0000224!2.19e-11!4;CL:0000080!9.68e-08!6;CL:0002087!4.77e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.16e-31;25!CL:0000791;8.81e-31;18!CL:0000789;8.81e-31;18!CL:0002419;8.81e-31;18!CL:0002127;1.07e-23;1!CL:0000911;1.07e-23;1!CL:0000814;1.07e-23;1!CL:0000895;1.34e-23;1!CL:0000625;1.28e-18;11!CL:0000542;1.18e-11;53!CL:0000898;8.96e-09;3!CL:0000623;1.00e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000893,2.04e-45,2;CL:0002489,2.04e-45,2;CL:0000809,2.04e-45,2;CL:0000808,2.04e-45,2;CL:0000894,2.04e-45,2;CL:0000806,2.04e-45,2;CL:0000807,2.04e-45,2;CL:0000805,2.04e-45,2;CL:0002425,2.04e-45,2;CL:0000084,1.13e-31,25;CL:0000827,1.13e-31,25;CL:0000791,8.55e-31,18;CL:0000789,8.55e-31,18;CL:0002420,8.55e-31,18;CL:0002419,8.55e-31,18;CL:0000790,8.55e-31,18;CL:0002127,1.07e-23,1;CL:0000914,1.07e-23,1;CL:0000911,1.07e-23,1;CL:0000814,1.07e-23,1;CL:0002042,1.07e-23,1;CL:0002039,1.07e-23,1;CL:0002040,1.07e-23,1;CL:0002041,1.07e-23,1;CL:0000810,1.34e-23,1;CL:0000895,1.34e-23,1;CL:0002436,1.34e-23,1;CL:0002427,1.34e-23,1;CL:0002428,1.34e-23,1;CL:0002429,1.34e-23,1;CL:0002433,1.34e-23,1;CL:0002431,1.34e-23,1;CL:0002432,1.34e-23,1;CL:0000838,1.11e-20,52;CL:0000542,2.73e-20,53;CL:0000051,2.73e-20,53;CL:0000625,1.24e-18,11;CL:0002087,3.29e-09,115;CL:0002031,8.06e-09,120;CL:0000898,8.96e-09,3;CL:0000623,9.66e-09,3;CL:0000825,9.66e-09,3;CL:0000738,9.19e-08,136 | |||
|ontology_enrichment_development_v019=CL:0002425;2.03e-45;2!CL:0000790;8.81e-31;18!CL:0002427;1.34e-23;1!CL:0000051;1.18e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!7.72e-20!15;UBERON:0000179!7.72e-20!15;UBERON:0000463!7.72e-20!15;UBERON:0004177!1.96e-11!7;UBERON:0002106!4.99e-07!3;UBERON:0004854!4.99e-07!3;UBERON:0009034!4.99e-07!3;UBERON:0002095!4.99e-07!3;UBERON:0004782!4.99e-07!3;UBERON:0003281!4.99e-07!3;UBERON:0009664!4.99e-07!3;UBERON:0002296!4.99e-07!3;UBERON:0005602!4.99e-07!3;UBERON:0001179!4.99e-07!3;UBERON:0006293!4.99e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.83e-07;15!UBERON:0000179;8.83e-07;15!UBERON:0000463;8.83e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.63e-23,4;UBERON:0005058,2.63e-23,4;UBERON:0009113,2.63e-23,4;UBERON:0003295,2.63e-23,4;UBERON:0005562,2.63e-23,4;UBERON:0003351,6.71e-16,6;UBERON:0004177,8.94e-14,7;UBERON:0005057,8.94e-14,7;UBERON:0000974,6.20e-10,10;UBERON:0003408,6.20e-10,10;UBERON:0001042,6.20e-10,10;UBERON:0009145,6.20e-10,10;UBERON:0006562,4.08e-09,11;UBERON:0009722,4.08e-09,11;UBERON:0007690,4.08e-09,11;UBERON:0000178,9.09e-07,15;UBERON:0000179,9.09e-07,15;UBERON:0000463,9.09e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339928028092699,6.89796888483458,0.34362744548263,0.506039384039006,0.637130828648193,0.651083453856419,0,1.20460095262218,2.43174561193395,0,0.473554504088034,0,1.81446068902259,0.267440195783507,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2172806952945,2.95546140302891,0,0,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,1.52927441428475,0,1.19115887728894,0.411362273086194,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31843099381408,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0.187967835959707,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr2:162762294..162762305,+ | |||
}} |
Revision as of 06:18, 21 January 2014
Short description: | p@chr2:162762294..162762305, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:162762294..162762305, + |
Coexpression cluster: | C121_NK_Natural_CD8_CD4_anaplastic_chronic_B |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.63e-23 | 4 |
hemolymphoid system gland | 2.63e-23 | 4 |
thymic region | 2.63e-23 | 4 |
pharyngeal gland | 2.63e-23 | 4 |
thymus primordium | 2.63e-23 | 4 |
pharyngeal epithelium | 6.71e-16 | 6 |
hemopoietic organ | 8.94e-14 | 7 |
immune organ | 8.94e-14 | 7 |
neck | 6.20e-10 | 10 |
gland of gut | 6.20e-10 | 10 |
chordate pharynx | 6.20e-10 | 10 |
pharyngeal region of foregut | 6.20e-10 | 10 |
pharynx | 4.08e-09 | 11 |
entire pharyngeal arch endoderm | 4.08e-09 | 11 |
early pharyngeal endoderm | 4.08e-09 | 11 |
blood | 9.09e-07 | 15 |
haemolymphatic fluid | 9.09e-07 | 15 |
organism substance | 9.09e-07 | 15 |