FFCP PHASE1:Hg19::chr2:224866423..224866438,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5270 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=8951 | |||
|TSSclassifier=not | |||
|UniProt=P07093 | |||
|association_with_transcript=178bp_to_M17783_5end | |||
|coexpression_cluster_id=C354 | |||
|description=CAGE_peak_8_at_SERPINE2_5end | |||
|id=chr2:224866423..224866438,- | |||
|ontology_enrichment_celltype=CL:0000055!1.48e-15!180;CL:0000057!2.19e-15!75;CL:0002620!4.59e-10!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;6.13e-12;23!CL:0000153;1.67e-09;9!CL:0000447;1.67e-09;9!CL:0000135;6.66e-09;3!CL:0000388;6.66e-09;3!CL:0000499;1.30e-08;28!CL:0002541;1.41e-08;3!CL:0002579;2.24e-08;3!CL:0002334;3.03e-07;12!CL:0000057;4.00e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.91e-19,76;CL:0002620,5.25e-12,23;CL:0000153,1.19e-09,9;CL:0000447,1.19e-09,9;CL:0000048,1.86e-09,427;CL:0000723,4.16e-09,433;CL:0000135,6.55e-09,3;CL:0000388,6.55e-09,3;CL:0002541,8.91e-09,3;CL:0000034,1.17e-08,441;CL:0000499,1.25e-08,28;CL:0002579,3.87e-08,3;CL:0002334,3.69e-07,12;CL:0000058,7.65e-07,6;CL:0000138,7.65e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;7.32e-12;5!DOID:450;7.32e-12;5!DOID:66;7.32e-12;5!DOID:423;7.32e-12;5!DOID:0080000;7.32e-12;5!DOID:11722;7.32e-12;5!DOID:0060084;2.21e-08;3!DOID:127;2.21e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.38e-11,5;DOID:450,1.38e-11,5;DOID:66,1.38e-11,5;DOID:423,1.38e-11,5;DOID:0080000,1.38e-11,5;DOID:11722,1.38e-11,5;DOID:0060084,1.76e-08,3;DOID:127,1.76e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0002097!2.04e-09!40;UBERON:0002199!5.97e-08!45;UBERON:0002416!5.97e-08!45;UBERON:0003102!9.84e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;5.58e-10;9!UBERON:0000042;5.58e-10;9!UBERON:0002097;9.74e-10;41!UBERON:0007846;6.66e-09;3!UBERON:0000043;6.66e-09;3!UBERON:0007845;6.66e-09;3!UBERON:0003124;1.41e-08;3!UBERON:0000920;1.41e-08;3!UBERON:0003688;3.56e-07;6!UBERON:0002358;3.56e-07;6!UBERON:0003684;3.56e-07;6!UBERON:0001178;3.56e-07;6!UBERON:0005406;9.63e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,3.66e-12,41;UBERON:0002199,2.19e-10,46;UBERON:0002416,2.19e-10,46;UBERON:0007846,6.55e-09,3;UBERON:0000043,6.55e-09,3;UBERON:0007845,6.55e-09,3;UBERON:0000920,8.91e-09,3;UBERON:0004923,8.31e-08,66;UBERON:0003102,2.97e-07,99;UBERON:0004457,3.73e-07,12;UBERON:0000042,3.73e-07,12;UBERON:0003688,5.17e-07,6;UBERON:0002358,5.17e-07,6;UBERON:0003684,5.17e-07,6;UBERON:0001178,5.17e-07,6;UBERON:0005406,9.69e-07,2 | |||
|phase1_expression=0.363356758541113,2.35510576280081,0.563817616383885,8.00586386825043,0.893922188854576,23.55314015071,0,0,0,0,0,0,0,0.123766352960047,0.994192127183747,0,1.20538905604795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,1.80719576192283,0.50133791063589,2.75208386025565,1.5905718941022,10.705967146658,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0.183201743930407,0,0,0.436094052142534,4.47274756525787,3.67228483827281,0.926864265692532,10.6129549677061,1.77334191099179,2.80338800071154,2.1349799145941,0.24666754841716,0,0.538842688278752,0.326923806226917,0,0,0.234321431833797,0,0,0.747243402759005,0.587172493218824,0,0.140450806702248,0,0,0.413303124703062,3.56400857184616,1.97813543422845,0,0,0,0,0,0,1.5324389789951,0.901428353439581,0.113432183160021,1.07633781413317,1.06778694409284,1.69545520927649,3.60109315301283,3.09157587715317,1.8034837803194,1.67505170698431,1.85653965465393,1.65642908774038,1.00973509697646,0.736399189138395,0.484938170456436,4.9701342952326,1.81353776809752,0.339121184620975,0.57978255948989,0.272746120590835,0,0,0,0.116193942869518,0.10366105501537,0,0,3.12899064659632,1.92972281457866,0,0,0,0,0.168584690078102,0,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0.548751427043128,0,0.301586917234893,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0.581267877027924,0.383382679165211,0,0,0,0,0,0.126995788584338,0.381988425558278,1.17217447210047,0,0.719792448923265,0.600686115687835,0,0.112131084345361,0,0,0.517086863031111,0,0,1.06375246633948,0,0,0,0.266422179016099,0,0.542621605391443,0,0.325736184293735,0,0.791951872933429,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,3.04040744001916,5.13690806375959,0.716243852959582,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0.271265023699736,0,1.24900292158013,0,0.35142424497814,0.300946099727719,0,0,0,0.184369168541703,3.0409265063829,0,0,0,0,0,0,0,0.907170879989041,2.72918588600655,0.460385919864187,3.64858122762996,4.35673107469383,1.02341449813341,12.0640440857706,38.5886972756977,0,0.177561725313127,0.164254312027618,0,0.348631135379878,0,1.80455823272956,0.184161977871793,0.459257792658427,1.0925470080403,0.524497659837696,0,0,0,1.46139224653261,0,0,0,0,0,0,1.00337954770971,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0.27470839445503,0,0,1.30012049207304,4.82051789532479,0.193341436584244,0.462145851343933,0.15350367472613,0,0,0,0.170453254832202,0,0.165284915360978,0.576570202095319,0,0.2023155617111,1.39453664789186,7.55549632393536,0,0,0,1.73986598415015,0.18532421910392,0.429374660225974,0,0,0,0,0,0,1.56989728039846,0,0,0.942499218765491,0.202182481573316,0,0,0,5.11798328225697,1.05650146756755,0,1.55545975149084,1.13008116620243,0,0,1.75380354101505,0,0,0.202910376962704,0.30982349809975,1.40847801266121,0,0.196498082026242,0,0,8.2331977766089,2.63435914367922,0,0,0.192444225451024,0,1.08890984861323,0.0941438007767792,0,0,0.886860307073351,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,2.14870036263921,0,0,0,0,0.333926115068718,0,0,0,0,0,0,0,0.933118762985422,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0,0,0,0,0,0.113942055847001,0,0.0897576444097721,0,13.0790475490087,1.83195186803725,26.1187040249131,0,0,0.166211681900156,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0.391329237864179,0,0,1.20990716048664,0.30607276163049,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.126621591911757,0,0.0801588202515337,0,0,0,0,0,0.14405479798815,0,0.235694034616795,0,0,0.203996435272644,0,0,0.136905378891993,0,0.429765441419957,0,0.837847203816763,0,0.717873024576814,0,0,0,0,0.720599767084807,0,0.0787831823072236,0,0,0,0,0,0.272406812223151,0.482259445395058,0.137539436597234,0,0,0,0.0607495566580247,0,0,0,0,1.97216073266129,0,0,1.32418394073086,0,5.97299561929084,1.72844298240254,9.79762080328227,0,0,0,0.113312091520126,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,0.610131324509816,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0.249960815924213,1.81978941049977,1.14186133417987,0.235265819698172,0,0,0.597019211547496,0,0.554805861502613,0.947015026375446,2.26411111577318,2.66943366478961,1.37304041038154,0.302461847526478,2.02068360757615,1.62640664988597,0.477890301491107,0,0.155262956876259,6.22059311761283,0.797525143673985,0,0.751288044986092,0.380805212168795,0.813741466409323,0.181848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| |||
|short_description=p8@SERPINE2 | |||
}} |
Revision as of 08:56, 21 January 2014
Short description: | p8@SERPINE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SERPINE2_5end |
Coexpression cluster: | C354_Fibroblast_Preadipocyte_Chondrocyte_chorionic_tenocyte_Synoviocyte_Smooth |
Association with transcript: | 178bp_to_M17783_5end |
EntrezGene: | SERPINE2 |
HGNC: | 8951 |
UniProt: | P07093 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.91e-19 | 76 |
skin fibroblast | 5.25e-12 | 23 |
GAG secreting cell | 1.19e-09 | 9 |
carbohydrate secreting cell | 1.19e-09 | 9 |
multi fate stem cell | 1.86e-09 | 427 |
somatic stem cell | 4.16e-09 | 433 |
fibrocyte | 6.55e-09 | 3 |
tendon cell | 6.55e-09 | 3 |
chorionic membrane mesenchymal stem cell | 8.91e-09 | 3 |
stem cell | 1.17e-08 | 441 |
stromal cell | 1.25e-08 | 28 |
omentum preadipocyte | 3.87e-08 | 3 |
preadipocyte | 3.69e-07 | 12 |
chondroblast | 7.65e-07 | 6 |
chondrocyte | 7.65e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
skin of body | 3.66e-12 | 41 |
integument | 2.19e-10 | 46 |
integumental system | 2.19e-10 | 46 |
dense regular connective tissue | 6.55e-09 | 3 |
tendon | 6.55e-09 | 3 |
regular connective tissue | 6.55e-09 | 3 |
egg chorion | 8.91e-09 | 3 |
organ component layer | 8.31e-08 | 66 |
surface structure | 2.97e-07 | 99 |
cavity lining | 3.73e-07 | 12 |
serous membrane | 3.73e-07 | 12 |
omentum | 5.17e-07 | 6 |
peritoneum | 5.17e-07 | 6 |
abdominal cavity | 5.17e-07 | 6 |
visceral peritoneum | 5.17e-07 | 6 |
perirenal fat | 9.69e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.38e-11 | 5 |
myotonic disease | 1.38e-11 | 5 |
muscle tissue disease | 1.38e-11 | 5 |
myopathy | 1.38e-11 | 5 |
muscular disease | 1.38e-11 | 5 |
myotonic dystrophy | 1.38e-11 | 5 |
cell type benign neoplasm | 1.76e-08 | 3 |
leiomyoma | 1.76e-08 | 3 |