FFCP PHASE1:Hg19::chr3:101575889..101575903,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64332 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29805 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-140bp_to_ENST00000495719_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_3_at_NFKBIZ_5end | |||
|id=chr3:101575889..101575903,+ | |||
|ontology_enrichment_celltype=CL:0000738!8.62e-22!140;CL:0002057!4.36e-21!42;CL:0002087!1.27e-19!119;CL:0000860!3.06e-18!45;CL:0002031!9.89e-18!124;CL:0000766!3.68e-16!76;CL:0002032!7.48e-15!165;CL:0000837!7.48e-15!165;CL:0000037!1.53e-14!172;CL:0000566!1.53e-14!172;CL:0000988!2.56e-14!182;CL:0000557!6.50e-13!71;CL:0002194!1.74e-12!63;CL:0000576!1.74e-12!63;CL:0000040!1.74e-12!63;CL:0000559!1.74e-12!63;CL:0002009!2.70e-12!65;CL:0000839!1.04e-11!70;CL:0000763!1.24e-08!112;CL:0000049!1.24e-08!112;CL:0000542!7.51e-07!53;CL:0000051!7.51e-07!53;CL:0000838!7.82e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.64e-25;33!CL:0002057;4.64e-25;33!CL:0000473;1.29e-19;39!CL:0000234;1.29e-19;39!CL:0000576;1.71e-18;48!CL:0000766;1.16e-14;69!CL:0002087;5.44e-10;104!CL:0002393;3.57e-08;6!CL:0002397;3.57e-08;6!CL:0000763;2.24e-07;100!CL:0000624;9.43e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.68e-35,42;CL:0002057,1.68e-35,42;CL:0000473,6.31e-34,48;CL:0000234,6.31e-34,48;CL:0000766,4.49e-28,72;CL:0000738,7.00e-27,136;CL:0002087,5.06e-26,115;CL:0002194,6.08e-25,59;CL:0000576,6.08e-25,59;CL:0000040,6.08e-25,59;CL:0000559,6.08e-25,59;CL:0002009,8.62e-24,61;CL:0000557,9.60e-24,67;CL:0002031,3.88e-23,120;CL:0000839,8.30e-23,66;CL:0000988,1.42e-21,177;CL:0000037,1.45e-20,168;CL:0002032,3.70e-20,161;CL:0000837,3.70e-20,161;CL:0000763,6.91e-17,108;CL:0000049,6.91e-17,108;CL:0002393,1.61e-09,9;CL:0002397,1.61e-09,9;CL:0000134,3.15e-08,354;CL:0002320,9.84e-08,361;CL:0000624,6.59e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;6.15e-26;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.81e-16!102;UBERON:0003061!9.81e-16!102;UBERON:0002193!8.95e-14!112;UBERON:0002371!3.23e-12!80;UBERON:0001474!3.30e-10!86;UBERON:0002405!4.39e-09!115;UBERON:0004765!5.79e-08!101;UBERON:0001434!5.79e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.96e-23,98;UBERON:0003061,5.96e-23,98;UBERON:0002371,6.97e-21,76;UBERON:0002193,1.28e-19,108;UBERON:0001474,1.45e-18,82;UBERON:0002405,2.94e-17,93;UBERON:0004765,5.64e-16,90;UBERON:0001434,3.24e-14,100;UBERON:0002384,2.25e-08,371;UBERON:0003081,5.94e-08,203 | |||
|phase1_expression=0,0,0,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0,0.990130823680373,0.331397375727916,1.34465029290355,0.602694528023977,0.730310090387373,0,0.246242116153576,0,0,0,0,0,0.764134057479513,0.738905305049512,0.393553906568396,1.57345710739562,0.767658796194425,0.464448369948228,0,0,0,0,0.710846162437108,0,12.1878989877013,14.0381113229099,9.54847831149748,0,0,0,0.726991193897824,0,0.727752183563449,3.0215774797739,2.87817521615278,3.40677007984614,3.74000110018796,3.33008918487831,3.54723344832878,16.5477926753577,7.10033151942209,5.41705946377367,1.88242339542605,2.45615535052061,4.71919317334678,23.5684597125595,7.06043859567406,31.327519164153,0,0.598390972864896,0,11.3181603065148,3.97169657283798,8.71951148593805,1.00499466102697,1.0429658368404,0.868755378820466,6.05399502633369,2.94622108790052,10.7597211729901,4.64761629886272,0.637812899895131,1.04829322754188,2.02191536063691,0.750884464207532,0.48217676009124,7.12531859353121,1.39241674039363,0.547992461293902,0,0.546138611262131,0.889509253863555,0.426730222566507,0,0.574752439954483,0,0,2.27685187643779,2.34894875748376,0,2.64342657158052,1.68152568894461,1.58030450865046,1.96709770113833,2.35806457649499,0.822405995998037,0.501559486172034,1.62961133316795,0.946895611469467,0,1.11410456885174,2.3568472597987,0.221533894583621,0,0.512365278902701,0.130059347559878,0.493313713811028,0.276350017785848,2.31842468588042,1.92772532110679,0.802622484269139,0,0.679856056185397,1.14966148080576,0.34362744548263,0,1.27426165729639,0.651083453856419,0,0.150575119077773,0.127986611154418,1.24930726552346,0.236777252044017,0,0.80642697289893,1.60464117470104,1.15859523106239,0,0,0,0,0,0.144846518960824,0,1.45990461090791,0.283604451492204,0.221729397462564,0,0.0654895377488563,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0.402829317109147,0,0.488124115096339,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,1.31780417436063,23.2668158488995,0,1.98788780678127,0,0.397227542439656,0.573673241497627,0.354668382198357,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0.587172493218824,0,0.140450806702248,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0,0,0.257640540045629,0,0.168776332241266,0.0974370051611986,0,0.276149695926898,0.161646056818812,0.710019185033229,0,0,0.386521706326594,0.545492241181669,0,0,0,0,0,0,0.36497735907583,0,0,0,1.85747171212792,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0.4115740113314,0,1.26755034821831,2.94848165003288,0,0,0.122988438543114,0,0.109750285408626,0,0.201057944823262,0.0925884451585296,0,0,0,0.115930404975077,0,0,0.925971025153221,0.380508304469197,0,0,0,0,0,0,0.16798212819886,0.708875486211932,0.0895585227028483,0,0,0,0,2.28060927094849,0.864719720501769,0.88369703398466,0.190493682876507,0,0,0,0.102827492703324,0.600686115687835,0,0,0,0.07333828582095,0.517086863031111,0,0.845302752556,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,2.10833939483032,0,0,0,0.868687840005475,0.205476322550383,0,0.224170287987055,2.1673383622212,1.2937654491571,2.56686072559497,0,0,0,0,0,2.99602809578873,14.9580729602012,0.828831026872071,0.736148950314839,0,0,1.24782516918484,0.178428988797162,0.630809660135739,0.35142424497814,0,0,0,0,0.184369168541703,0,0,0,0.413536052245775,1.72571360654893,1.921096040462,0,0,0,0.248107807818777,0.61384789315225,0.280660094433074,0.256278298511402,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0,0.120859449591622,0.200506470303285,0.184161977871793,0,0,0.131124414959424,0,0.308061348417659,0.784349769176855,1.46139224653261,0.527758144464379,0,0.170093705276516,0.215915916102139,0,0.270946437543853,0,0,1.66215201785745,0.223874754722178,0,0,0,0,0,0.412164046590889,0.183138929636687,0,0,0.650060246036521,1.6068392984416,0.193341436584244,0.308097234229289,0,0.137836572484531,0,0,0.170453254832202,0,0.165284915360978,0.768760269460425,4.08360679982669,0.708104465988849,0,0,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0.190630193923825,0,0.855877976067841,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0,1.21856744815642,0,0,0.282810863907425,0,0,0.66343897524122,0,0,1.31178950409327,0,0,0,0.286822704408103,0,0,0.354761064070598,1.05553817648832,0,0,0,0.288666338176536,0,0,0.188287601553558,0.86101074534246,1.68471475667626,0,0.918893600827838,0.507447609232169,0.764637207142375,0.569647187174163,0.238231775457789,0.411362273086194,0.648473311192717,1.62009431171434,0.79312517629427,0,0,0,0.185803175125719,0,0.284567373393656,0,0,0,0.211673582723883,0,0,0,0,5.01268954180134,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0.99921590399346,0,0,0.293016358543788,0,0.891547074219827,0,0.71623345421307,0,0.307160702099232,0,0,1.8922479853894,0.988823245360557,0,0.398495976502139,0.828851746593443,0,0,4.06179858021529,0.311039587661807,1.25815691606258,0.179021174675609,0,0.197286811273867,0,1.11136990144637,0,0,0,0,0.349839999984783,0,0.227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| |||
|short_description=p3@NFKBIZ | |||
}} |
Revision as of 20:16, 21 January 2014
Short description: | p3@NFKBIZ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NFKBIZ_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -140bp_to_ENST00000495719_5end |
EntrezGene: | NFKBIZ |
HGNC: | 29805 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.68e-35 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.68e-35 | 42 |
defensive cell | 6.31e-34 | 48 |
phagocyte | 6.31e-34 | 48 |
myeloid leukocyte | 4.49e-28 | 72 |
leukocyte | 7.00e-27 | 136 |
nongranular leukocyte | 5.06e-26 | 115 |
monopoietic cell | 6.08e-25 | 59 |
monocyte | 6.08e-25 | 59 |
monoblast | 6.08e-25 | 59 |
promonocyte | 6.08e-25 | 59 |
macrophage dendritic cell progenitor | 8.62e-24 | 61 |
granulocyte monocyte progenitor cell | 9.60e-24 | 67 |
hematopoietic lineage restricted progenitor cell | 3.88e-23 | 120 |
myeloid lineage restricted progenitor cell | 8.30e-23 | 66 |
hematopoietic cell | 1.42e-21 | 177 |
hematopoietic stem cell | 1.45e-20 | 168 |
hematopoietic oligopotent progenitor cell | 3.70e-20 | 161 |
hematopoietic multipotent progenitor cell | 3.70e-20 | 161 |
myeloid cell | 6.91e-17 | 108 |
common myeloid progenitor | 6.91e-17 | 108 |
intermediate monocyte | 1.61e-09 | 9 |
CD14-positive, CD16-positive monocyte | 1.61e-09 | 9 |
mesenchymal cell | 3.15e-08 | 354 |
connective tissue cell | 9.84e-08 | 361 |
CD4-positive, alpha-beta T cell | 6.59e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.96e-23 | 98 |
blood island | 5.96e-23 | 98 |
bone marrow | 6.97e-21 | 76 |
hemolymphoid system | 1.28e-19 | 108 |
bone element | 1.45e-18 | 82 |
immune system | 2.94e-17 | 93 |
skeletal element | 5.64e-16 | 90 |
skeletal system | 3.24e-14 | 100 |
connective tissue | 2.25e-08 | 371 |
lateral plate mesoderm | 5.94e-08 | 203 |