FFCP PHASE1:Hg19::chr4:21699314..21699327,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80333 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30083 | |||
|TSSclassifier=strong | |||
|UniProt=Q3YAB9 | |||
|association_with_transcript=0bp_to_NM_001035003,uc003gqh.1_5end | |||
|coexpression_cluster_id=C135 | |||
|description=CAGE_peak_7_at_KCNIP4_5end | |||
|id=chr4:21699314..21699327,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000123;1.34e-08;2!CL:0002253;1.34e-08;2!CL:0000242;1.34e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.29e-08,2;CL:0002253,1.39e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.52e-43;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.54e-28!115;UBERON:0001049!4.10e-23!57;UBERON:0005068!4.10e-23!57;UBERON:0006241!4.10e-23!57;UBERON:0007135!4.10e-23!57;UBERON:0003075!1.22e-20!86;UBERON:0007284!1.22e-20!86;UBERON:0005743!2.50e-20!86;UBERON:0001017!5.34e-20!82;UBERON:0002346!2.15e-19!90;UBERON:0000073!2.23e-19!94;UBERON:0001016!2.23e-19!94;UBERON:0003076!6.98e-19!15;UBERON:0003057!6.98e-19!15;UBERON:0002616!3.40e-18!59;UBERON:0000955!5.16e-16!69;UBERON:0006238!5.16e-16!69;UBERON:0004733!1.02e-15!12;UBERON:0002028!1.02e-15!12;UBERON:0007277!1.02e-15!12;UBERON:0002308!3.41e-15!9;UBERON:0000125!3.41e-15!9;UBERON:0004732!2.18e-14!13;UBERON:0002298!3.12e-13!8;UBERON:0002680!2.72e-12!9;UBERON:0001895!2.72e-12!9;UBERON:0010092!2.72e-12!9;UBERON:0004121!5.66e-11!169;UBERON:0000924!1.55e-10!173;UBERON:0006601!1.55e-10!173;UBERON:0002780!3.90e-10!41;UBERON:0001890!3.90e-10!41;UBERON:0006240!3.90e-10!41;UBERON:0009663!4.37e-10!7;UBERON:0000988!5.53e-10!3;UBERON:0003080!7.95e-10!42;UBERON:0006331!1.04e-09!3;UBERON:0000153!2.74e-09!129;UBERON:0007811!2.74e-09!129;UBERON:0002020!3.92e-09!34;UBERON:0003528!3.92e-09!34;UBERON:0000033!4.18e-09!123;UBERON:0003056!5.94e-08!61;UBERON:0002420!9.07e-08!9;UBERON:0007245!9.07e-08!9;UBERON:0010009!9.07e-08!9;UBERON:0010011!9.07e-08!9;UBERON:0000454!9.07e-08!9;UBERON:0002791!1.10e-07!33;UBERON:0001893!2.10e-07!34;UBERON:0000007!2.21e-07!2;UBERON:0002148!2.66e-07!2;UBERON:0009662!2.66e-07!2;UBERON:0001875!3.39e-07!2;UBERON:0006514!3.39e-07!2;UBERON:0000160!3.41e-07!27;UBERON:0001255!5.02e-07!2;UBERON:0001556!5.02e-07!2;UBERON:0000059!5.13e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;8.00e-22;6!UBERON:0001052;1.85e-15;4!UBERON:0002680;8.88e-15;9!UBERON:0001895;8.88e-15;9!UBERON:0000160;4.50e-13;17!UBERON:0004907;1.46e-12;5!UBERON:0000059;1.97e-12;11!UBERON:0004733;3.08e-11;12!UBERON:0002028;3.08e-11;12!UBERON:0004732;2.03e-10;13!UBERON:0005409;2.72e-10;22!UBERON:0000007;2.00e-08;2!UBERON:0001954;2.67e-08;2!UBERON:0001875;2.67e-08;2!UBERON:0003022;2.67e-08;2!UBERON:0002421;2.67e-08;2!UBERON:0006514;2.67e-08;2!UBERON:0002600;2.67e-08;2!UBERON:0001155;2.36e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,8.29e-22,6;UBERON:0006215,8.29e-22,6;UBERON:0001052,1.92e-15,4;UBERON:0002680,9.09e-15,9;UBERON:0001895,9.09e-15,9;UBERON:0010092,9.09e-15,9;UBERON:0000160,4.64e-13,17;UBERON:0004907,1.50e-12,5;UBERON:0000059,2.05e-12,11;UBERON:0004733,3.13e-11,12;UBERON:0002028,3.13e-11,12;UBERON:0007277,3.13e-11,12;UBERON:0004732,2.06e-10,13;UBERON:0000073,3.84e-09,53;UBERON:0002616,3.84e-09,53;UBERON:0005409,4.02e-09,25;UBERON:0003076,4.24e-09,15;UBERON:0003057,4.24e-09,15;UBERON:0001049,1.21e-08,56;UBERON:0005068,1.21e-08,56;UBERON:0006241,1.21e-08,56;UBERON:0007135,1.21e-08,56;UBERON:0000007,2.15e-08,2;UBERON:0001954,2.31e-08,2;UBERON:0003022,2.31e-08,2;UBERON:0002421,2.31e-08,2;UBERON:0002600,2.31e-08,2;UBERON:0001875,2.48e-08,2;UBERON:0006514,2.48e-08,2;UBERON:0011216,9.90e-08,223;UBERON:0001155,2.44e-07,9;UBERON:0001016,4.87e-07,89;UBERON:0000955,5.58e-07,68;UBERON:0006238,5.58e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0.552567831062295,0,0,0,0,0.0898683511473268,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0.344743373241465,0,0.694499979733169,0,0,4.5774520895125,1.10579259931225,2.95547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.14082511148901,0,0.176915129006678,4.27721101453538,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,1.12990370390266,0.137041924646751,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.273810757783986,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,1.59045937961861,0,0.321506296930038,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.79339561045614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.443716206147409,0.683060432355218,0,0,0.303298235083296,0,0,0,7.53589348776291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.7563613570434,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42786241694653,0.455324382702595,0.177404740325278,0,0,0.339848664884159,0.0657727735628491,0,0,0.235479278551542,0.157115589916002,0,5.47895232305697,0,0,0.142953088353313,0.158013611732727,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,1.18920090777569,0,0,0.150962843566674,0.0771741581079447,0.655678681511872,0,0.735444965261716,0,0.196308467114945,0.297046400327086,0,0,0,0,0,0,0,0,0.730336388246517,0,0.143339583151451,0,0,0,2.645134202577,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0,0.23806443146374,0,0,0,0,0,0,0,0.0673520530145875,0,0,0.325613074443898,0,0,0,0,0,0.813792356631477,0,0,0 | |||
|short_description=p7@KCNIP4 | |||
}} |
Revision as of 00:26, 22 January 2014
Short description: | p7@KCNIP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_KCNIP4_5end |
Coexpression cluster: | C135_neuroblastoma_retinoblastoma_carcinoid_choriocarcinoma_testicular_acute_rectum |
Association with transcript: | 0bp_to_NM_001035003, uc003gqh.1_5end |
EntrezGene: | KCNIP4 |
HGNC: | 30083 |
UniProt: | Q3YAB9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.29e-08 | 2 |
epithelial cell of large intestine | 1.39e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 8.29e-22 | 6 |
rhombic lip | 8.29e-22 | 6 |
rectum | 1.92e-15 | 4 |
regional part of metencephalon | 9.09e-15 | 9 |
metencephalon | 9.09e-15 | 9 |
future metencephalon | 9.09e-15 | 9 |
intestine | 4.64e-13 | 17 |
lower digestive tract | 1.50e-12 | 5 |
large intestine | 2.05e-12 | 11 |
segmental subdivision of hindbrain | 3.13e-11 | 12 |
hindbrain | 3.13e-11 | 12 |
presumptive hindbrain | 3.13e-11 | 12 |
segmental subdivision of nervous system | 2.06e-10 | 13 |
regional part of nervous system | 3.84e-09 | 53 |
regional part of brain | 3.84e-09 | 53 |
gastrointestinal system | 4.02e-09 | 25 |
posterior neural tube | 4.24e-09 | 15 |
chordal neural plate | 4.24e-09 | 15 |
neural tube | 1.21e-08 | 56 |
neural rod | 1.21e-08 | 56 |
future spinal cord | 1.21e-08 | 56 |
neural keel | 1.21e-08 | 56 |
pituitary gland | 2.15e-08 | 2 |
Ammon's horn | 2.31e-08 | 2 |
lobe parts of cerebral cortex | 2.31e-08 | 2 |
hippocampal formation | 2.31e-08 | 2 |
limbic lobe | 2.31e-08 | 2 |
globus pallidus | 2.48e-08 | 2 |
pallidum | 2.48e-08 | 2 |
organ system subdivision | 9.90e-08 | 223 |
colon | 2.44e-07 | 9 |
nervous system | 4.87e-07 | 89 |
brain | 5.58e-07 | 68 |
future brain | 5.58e-07 | 68 |