FFCP PHASE1:Hg19::chr6:127840441..127840452,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=387104 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21494 | |||
|TSSclassifier=strong | |||
|UniProt=A5PLQ8,Q5TF21 | |||
|association_with_transcript=47bp_to_ENST00000556132,NM_001012279,uc003qbd.2_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_17_at_C6orf174_5end | |||
|id=chr6:127840441..127840452,- | |||
|ontology_enrichment_celltype=CL:0000047!9.90e-15!8;CL:0002319!5.25e-14!25;CL:0000133!5.43e-12!59;CL:0000540!2.62e-11!6;CL:0000031!2.62e-11!6;CL:0000404!2.62e-11!6;CL:0000221!7.02e-10!71 | |||
|ontology_enrichment_celltype_v019=CL:0000333;2.96e-20;5!CL:0000540;3.60e-17;6!CL:0000404;3.60e-17;6!CL:0002319;2.00e-14;25!CL:0002321;3.98e-07;15!CL:0000123;5.89e-07;2!CL:0000242;5.89e-07;2!CL:0000047;6.42e-07;2!CL:0002535;9.01e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.93e-22,8;CL:0000540,3.31e-17,6;CL:0000031,3.31e-17,6;CL:0000404,3.31e-17,6;CL:0002319,1.91e-14,25;CL:0000133,1.54e-13,59;CL:0000221,5.78e-11,72;CL:0000242,6.07e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000031;3.60e-17;6!CL:0000133;3.21e-07;59!UBERON:0010122;9.01e-07;2 | |||
|ontology_enrichment_disease=DOID:171!7.56e-09!10;DOID:169!1.38e-08!6 | |||
|ontology_enrichment_disease_v019=DOID:169;5.44e-17;6!DOID:171;1.96e-10;10!DOID:4362;1.06e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:169,5.45e-17,6;DOID:171,1.96e-10,10;DOID:4362,1.38e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.06e-41!94;UBERON:0001016!1.06e-41!94;UBERON:0001017!2.87e-38!82;UBERON:0005743!8.04e-36!86;UBERON:0001049!1.81e-33!57;UBERON:0005068!1.81e-33!57;UBERON:0006241!1.81e-33!57;UBERON:0007135!1.81e-33!57;UBERON:0001893!9.97e-33!34;UBERON:0002020!1.32e-32!34;UBERON:0003528!1.32e-32!34;UBERON:0002791!2.36e-31!33;UBERON:0001869!2.66e-30!32;UBERON:0002780!4.44e-30!41;UBERON:0001890!4.44e-30!41;UBERON:0006240!4.44e-30!41;UBERON:0002616!5.45e-30!59;UBERON:0003080!3.72e-29!42;UBERON:0000955!5.15e-29!69;UBERON:0006238!5.15e-29!69;UBERON:0000924!2.44e-26!173;UBERON:0006601!2.44e-26!173;UBERON:0002346!3.64e-26!90;UBERON:0004121!4.06e-25!169;UBERON:0003075!5.90e-25!86;UBERON:0007284!5.90e-25!86;UBERON:0003056!7.00e-25!61;UBERON:0000956!6.47e-23!25;UBERON:0000203!6.47e-23!25;UBERON:0001950!1.15e-20!20;UBERON:0000033!1.05e-18!123;UBERON:0002619!2.00e-18!22;UBERON:0000153!3.18e-17!129;UBERON:0007811!3.18e-17!129;UBERON:0002308!3.64e-11!9;UBERON:0000125!3.64e-11!9;UBERON:0000025!7.02e-10!194;UBERON:0001872!2.17e-09!5;UBERON:0002420!8.18e-09!9;UBERON:0007245!8.18e-09!9;UBERON:0010009!8.18e-09!9;UBERON:0010011!8.18e-09!9;UBERON:0000454!8.18e-09!9;UBERON:0009663!1.08e-08!7;UBERON:0000369!4.77e-08!4;UBERON:0002435!4.77e-08!4;UBERON:0000204!4.77e-08!4;UBERON:0010082!4.77e-08!4;UBERON:0000119!5.43e-08!312;UBERON:0000483!8.67e-08!309;UBERON:0001871!1.27e-07!7;UBERON:0000475!2.18e-07!365;UBERON:0007023!3.07e-07!115;UBERON:0000922!3.67e-07!612;UBERON:0000923!4.01e-07!604;UBERON:0005291!4.01e-07!604;UBERON:0006598!4.01e-07!604;UBERON:0002532!4.01e-07!604;UBERON:0002050!4.53e-07!605;UBERON:0005423!4.53e-07!605;UBERON:0000200!4.98e-07!6;UBERON:0000010!5.69e-07!8;UBERON:0002298!5.86e-07!8;UBERON:0000013!6.66e-07!5;UBERON:0002410!6.66e-07!5;UBERON:0000064!7.05e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;2.96e-20;5!UBERON:0002410;2.96e-20;5!UBERON:0000010;1.57e-11;8!UBERON:0000002;3.13e-08;6!UBERON:0001560;3.13e-08;6!UBERON:0001016;5.73e-07;83!UBERON:0001873;9.01e-07;2!UBERON:0006955;9.01e-07;2!UBERON:0004801;9.01e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,2.97e-20,5;UBERON:0002410,2.97e-20,5;UBERON:0001016,1.40e-18,89;UBERON:0001017,3.89e-12,81;UBERON:0000010,1.57e-11,8;UBERON:0004121,1.47e-10,171;UBERON:0000924,1.47e-10,171;UBERON:0006601,1.47e-10,171;UBERON:0000002,3.90e-08,6;UBERON:0001560,3.90e-08,6;UBERON:0011216,1.28e-07,223;UBERON:0001873,7.20e-07,2;UBERON:0010122,7.20e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0.313454721478088,0.85870796139317,0.547497700291537,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.443458794925128,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.149448680551801,0.352303495931295,0,0,0,0,0,0,0,0,0,0.336672227908132,0.125118519871964,0.277064115484183,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0.194874010322397,0,0,0,0,0,0,0,0,0,0,0.265059536642971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380987365753014,0,0,0,0.205654985406647,0,0,0.112131084345361,0,0,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,2.60279707715243,1.54657762555539,3.85287410269002,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0.096670718292122,0,0,0,0.107420244868274,0.145016693914229,0.255679882248303,0.0890320356467374,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0.430234056612155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0.281338832821026,0,0,0,0,0,1.25966373927138,0,0,0,0,0,0,0,0,0,0,0.556608588971108,1.99613798001194,0,0,0,0,0,0,1.03423011972439,0,0.173624994933292,1.77148277162768,0.361789315876224,0,0.331737779793674,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247127877893006,0.208843899010911,0.202203398942031,0,0,0,0,0,0,0,6.73360075587078,0,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482259445395058,0.137539436597234,0.415440338029185,0,0,0.242998226632099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511164065356265,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0.554645257684261,0.124192805882767,0,0,0,0,0,0,3.04334160082733,0,0,0,0,0,0.889811221596536,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0.265841714557995,0,0,0,0.406870733204662,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,1.40683808434017,1.1860729253635,0.629063767423586,1.63814457288021,0,0.637724760305049,0,0,0,0,0,0,0,0.256916900385838,0,0.638535436228605,0.205116364240755,5.5455773168778,0.345786262321089,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0.781078098613847,0.206686796501184,0.317079050969534,8.75159694429151,0,0,0.175871244359621,0,0,0.336283722218824,0,0,0,0,0,0.475788130837822,0.328863867814245,0,0,0,0.942693539496011,0,0.913158720509496,0.215927591218621,0,0,1.42212250559454,0,0,0,0,0,0,0,0.236664001461131,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,1.16969731731053,0,0,0,0.219881033490858,0.603851374266694,0,0,0,0,0.942706188406504,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.407948941145488,6.98161104544604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p17@C6orf174 | |||
}} |
Revision as of 13:48, 22 January 2014
Short description: | p17@C6orf174 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_C6orf174_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 47bp_to_ENST00000556132, NM_001012279, uc003qbd.2_5end |
EntrezGene: | C6orf174 |
HGNC: | 21494 |
UniProt: | A5PLQ8Q5TF21 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.93e-22 | 8 |
neuron | 3.31e-17 | 6 |
neuroblast | 3.31e-17 | 6 |
electrically signaling cell | 3.31e-17 | 6 |
neural cell | 1.91e-14 | 25 |
neurectodermal cell | 1.54e-13 | 59 |
ectodermal cell | 5.78e-11 | 72 |
Merkel cell | 6.07e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 2.97e-20 | 5 |
autonomic nervous system | 2.97e-20 | 5 |
nervous system | 1.40e-18 | 89 |
central nervous system | 3.89e-12 | 81 |
peripheral nervous system | 1.57e-11 | 8 |
ectoderm-derived structure | 1.47e-10 | 171 |
ectoderm | 1.47e-10 | 171 |
presumptive ectoderm | 1.47e-10 | 171 |
uterine cervix | 3.90e-08 | 6 |
neck of organ | 3.90e-08 | 6 |
organ system subdivision | 1.28e-07 | 223 |
caudate nucleus | 7.20e-07 | 2 |
future caudate nucleus | 7.20e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 5.45e-17 | 6 |
neuroectodermal tumor | 1.96e-10 | 10 |
cervical cancer | 1.38e-09 | 5 |