FFCP PHASE1:Hg19::chrX:123095890..123095935,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10735 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11355 | |||
|TSSclassifier=strong | |||
|UniProt=B1AMT2 | |||
|association_with_transcript=7bp_to_ENST00000428941_5end | |||
|description=CAGE_peak_3_at_STAG2_5end | |||
|id=chrX:123095890..123095935,+ | |||
|ontology_enrichment_celltype=CL:0000542!7.53e-07!53;CL:0000051!7.53e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000945;6.46e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,6.99e-07,53;CL:0000051,6.99e-07,53;CL:0000945,9.76e-07,24;CL:0000826,9.76e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.21e-40!235;DOID:14566!5.83e-40!239;DOID:2531!3.74e-20!51;DOID:0060083!3.74e-20!51;DOID:0050687!9.77e-20!143;DOID:0050686!3.50e-18!137;DOID:1240!1.12e-16!39;DOID:305!3.48e-15!106;DOID:8692!1.18e-12!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;4.47e-14;39!DOID:2531;2.93e-13;51!DOID:0060083;2.93e-13;51!DOID:8692;4.15e-13;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.61e-40,235;DOID:14566,9.45e-40,239;DOID:2531,1.41e-20,51;DOID:0060083,1.41e-20,51;DOID:0050687,1.96e-19,143;DOID:0050686,1.16e-17,137;DOID:1240,3.25e-17,39;DOID:305,1.37e-14,106;DOID:8692,4.76e-13,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p3@STAG2 | |||
}} |
Revision as of 06:51, 23 January 2014
Short description: | p3@STAG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_STAG2_5end |
Coexpression cluster: | NA |
Association with transcript: | 7bp_to_ENST00000428941_5end |
EntrezGene: | STAG2 |
HGNC: | 11355 |
UniProt: | B1AMT2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 6.99e-07 | 53 |
common lymphoid progenitor | 6.99e-07 | 53 |
lymphocyte of B lineage | 9.76e-07 | 24 |
pro-B cell | 9.76e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.61e-40 | 235 |
disease of cellular proliferation | 9.45e-40 | 239 |
hematologic cancer | 1.41e-20 | 51 |
immune system cancer | 1.41e-20 | 51 |
cell type cancer | 1.96e-19 | 143 |
organ system cancer | 1.16e-17 | 137 |
leukemia | 3.25e-17 | 39 |
carcinoma | 1.37e-14 | 106 |
myeloid leukemia | 4.76e-13 | 31 |