UBERON:0004211: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def="The nephron epithelium is a tissue that covers the surface of a nephron" [GO:0072088] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0004211 | |||
|is_a=UBERON:0004819 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|part_of= | |name=nephron epithelium | ||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0001285 | |||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym="epithelial tissue of nephron" EXACT [OBOL:automatic];;"epithelium of nephron" EXACT [OBOL:automatic];;"nephron epithelial tissue" EXACT [OBOL:automatic] | ||
|union_of= | |||
|xref= | |||
}} | }} |
Latest revision as of 17:45, 12 September 2014
Name: | nephron epithelium |
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Namespace: | FANTOM |
Definition: | "The nephron epithelium is a tissue that covers the surface of a nephron" [GO:0072088] |
Synonyms: |
"epithelial tissue of nephron" EXACT [OBOL:automatic] "epithelium of nephron" EXACT [OBOL:automatic] "nephron epithelial tissue" EXACT [OBOL:automatic] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0004819(kidney epithelium) |
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part_of: | UBERON:0001285(nephron) |
Children
is a: | UBERON:0001231 (nephron tubule),UBERON:0004810 (nephron tubule epithelium) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11515-119H3 (Renal Proximal Tubular Epithelial Cell, donor1)
- 11516-119H4 (Renal Cortical Epithelial Cells, donor1)
- 11517-119H5 (Renal Epithelial Cells, donor1)
- 11518-119H6 (Renal Mesangial Cells, donor1)
- 11595-120H2 (Renal Proximal Tubular Epithelial Cell, donor2)
- 11596-120H3 (Renal Cortical Epithelial Cells, donor2)
- 11597-120H4 (Renal Epithelial Cells, donor2)
- 11598-120H5 (Renal Mesangial Cells, donor2)
- 11676-122H2 (Renal Proximal Tubular Epithelial Cell, donor3)
- 11677-122H3
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004211 (nephron epithelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data