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{{UBERON
{{UBERON
|id=UBERON:0004211
|alt_id=
|name=nephron epithelium
|namespace=
|def="The nephron epithelium is a tissue that covers the surface of a nephron" [GO:0072088]
|xref=
|is_a=UBERON:0004819
|synonym="epithelial tissue of nephron" EXACT [OBOL:automatic];;"epithelium of nephron" EXACT [OBOL:automatic];;"nephron epithelial tissue" EXACT [OBOL:automatic]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="The nephron epithelium is a tissue that covers the surface of a nephron" [GO:0072088]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0004211
|is_a=UBERON:0004819
|is_obsolete=
|located_in=
|located_in=
|part_of=
|name=nephron epithelium
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0001285
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="epithelial tissue of nephron" EXACT [OBOL:automatic];;"epithelium of nephron" EXACT [OBOL:automatic];;"nephron epithelial tissue" EXACT [OBOL:automatic]
|union_of=
|xref=
}}
}}

Latest revision as of 17:45, 12 September 2014

Name:nephron epithelium
Namespace:FANTOM
Definition:"The nephron epithelium is a tissue that covers the surface of a nephron" [GO:0072088]
Synonyms: "epithelial tissue of nephron" EXACT [OBOL:automatic]
"epithelium of nephron" EXACT [OBOL:automatic]
"nephron epithelial tissue" EXACT [OBOL:automatic]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0004819(kidney epithelium)
part_of:UBERON:0001285(nephron)



Children

is a:UBERON:0001231 (nephron tubule),UBERON:0004810 (nephron tubule epithelium)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004211 (nephron epithelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data