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{{UBERON
{{UBERON
|id=UBERON:0005911
|alt_id=
|name=endo-epithelium
|namespace=
|def="Epithelium that derives from the endoderm. Examples: urothelium, transitional epithelium of ureter, epithelium of prostatic gland.[FMA]" [FMA:69065, FMA:FMA]
|xref=FMA:69065
|is_a=UBERON:0000483;;UBERON:0004119
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="Epithelium that derives from the endoderm. Examples: urothelium, transitional epithelium of ureter, epithelium of prostatic gland.[FMA]" [FMA:69065, FMA:FMA]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=UBERON:0000925
|develops_from=UBERON:0000925
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0005911
|is_a=UBERON:0000483 ;;UBERON:0004119
|is_obsolete=
|located_in=
|located_in=
|name=endo-epithelium
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=FMA:69065
}}
}}

Latest revision as of 17:55, 12 September 2014

Name:endo-epithelium
Namespace:FANTOM
Definition:"Epithelium that derives from the endoderm. Examples: urothelium, transitional epithelium of ureter, epithelium of prostatic gland.[FMA]" [FMA:69065, FMA:FMA]
Xrefs:
links:
FMA:69065

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000483(epithelium),UBERON:0004119(endoderm-derived structure)
develops_from:UBERON:0000925(endoderm)



Children

is a:UBERON:0000118 (lung bud),UBERON:0001281 (hepatic sinusoid),UBERON:0003258 (endoderm of foregut),UBERON:0003351 (pharyngeal epithelium),UBERON:0003922 (pancreatic epithelial bud),UBERON:0004802 (respiratory tract epithelium),UBERON:0004820 (bile duct epithelium),UBERON:0005356 (Rathke's pouch),UBERON:0005910 (transitional epithelium),UBERON:0009497 (epithelium of foregut-midgut junction)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005911 (endo-epithelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data