Personal tools

UBERON:0009881: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{UBERON
{{UBERON
|id=UBERON:0009881
|alt_id=
|name=anterior lateral plate mesoderm
|namespace=
|def=
|xref=TAO:0005041;;ZFA:0005041
|is_a=UBERON:0004120;;UBERON:0005291
|synonym="ALPM" EXACT [ZFA:0005041]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0009881
|is_a=UBERON:0004120 ;;UBERON:0005291
|is_obsolete=
|located_in=
|located_in=
|name=anterior lateral plate mesoderm
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0003081
|part_of=UBERON:0003081
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="ALPM" EXACT [ZFA:0005041]
|union_of=
|xref=TAO:0005041;;ZFA:0005041
}}
}}

Latest revision as of 18:07, 12 September 2014

Name:anterior lateral plate mesoderm
Namespace:FANTOM
Xrefs:
links:

TAO:0005041

ZFA:0005041
Synonyms: "ALPM" EXACT [ZFA:0005041]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0004120(mesoderm-derived structure),UBERON:0005291(embryonic tissue)
part_of:UBERON:0003081(lateral plate mesoderm)



Children

part of:UBERON:0007005 (cardiac mesoderm)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0009881 (anterior lateral plate mesoderm), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.09e-81FFCP PHASE1:Mm9::chr9:24549775..24549776,-#_ea352f4971087707abc986d33056f4cdp@chr9:24549775..24549776, -
1.09e-81FFCP PHASE2:Mm9::chr1:137747392..137747402,-#_ea352f4971087707abc986d33056f4cdp@chr1:137747392..137747402, -
1.09e-81FFCP PHASE2:Mm9::chr4:147375434..147375447,+#_ea352f4971087707abc986d33056f4cdp@chr4:147375434..147375447, +
1.09e-81FFCP PHASE1:Mm9::chr1:137747392..137747402,-#_ea352f4971087707abc986d33056f4cdp@chr1:137747392..137747402, -
1.09e-81FFCP PHASE2:Mm9::chr9:24549775..24549776,-#_ea352f4971087707abc986d33056f4cdp@chr9:24549775..24549776, -
1.09e-81FFCP PHASE1:Mm9::chr4:147375434..147375447,+#_ea352f4971087707abc986d33056f4cdp@chr4:147375434..147375447, +
1.88e-78FFCP PHASE2:Mm9::chr4:140980456..140980463,+#_cf8de1be05d49d42885bb7470412eac6p@chr4:140980456..140980463, +
1.88e-78FFCP PHASE1:Mm9::chr4:140980456..140980463,+#_cf8de1be05d49d42885bb7470412eac6p@chr4:140980456..140980463, +
1.92e-77FFCP PHASE1:Mm9::chr1:137737483..137737497,-#_07ba12616f27ac6cf9f212ce6cd41b98p@chr1:137737483..137737497, -
1.92e-77FFCP PHASE2:Mm9::chr1:137737483..137737497,-#_07ba12616f27ac6cf9f212ce6cd41b98p@chr1:137737483..137737497, -
1.92e-77FFCP PHASE1:Mm9::chr12:113728951..113728965,+#_07ba12616f27ac6cf9f212ce6cd41b98p@chr12:113728951..113728965, +
1.92e-77FFCP PHASE2:Mm9::chr12:113728951..113728965,+#_07ba12616f27ac6cf9f212ce6cd41b98p@chr12:113728951..113728965, +
2.14e-77FFCP PHASE2:Mm9::chr4:147375200..147375220,+#_b130974fa886357dab4a73acd0b766d2p@chr4:147375200..147375220, +
2.14e-77FFCP PHASE1:Mm9::chr19:36187511..36187515,-#_b130974fa886357dab4a73acd0b766d2p@chr19:36187511..36187515, -
2.14e-77FFCP PHASE2:Mm9::chr19:36187511..36187515,-#_b130974fa886357dab4a73acd0b766d2p@chr19:36187511..36187515, -
2.14e-77FFCP PHASE1:Mm9::chr4:147375200..147375220,+#_b130974fa886357dab4a73acd0b766d2p@chr4:147375200..147375220, +
8.14e-77FFCP PHASE2:Mm9::chr11:65461897..65461929,-#_d2bd01b713192d076f8327f952866dcep@chr11:65461897..65461929, -
8.14e-77FFCP PHASE2:Mm9::chr14:55584272..55584298,-#_d2bd01b713192d076f8327f952866dcep@chr14:55584272..55584298, -
8.14e-77FFCP PHASE1:Mm9::chr4:147375901..147375913,+#_d2bd01b713192d076f8327f952866dcep@chr4:147375901..147375913, +
8.14e-77FFCP PHASE2:Mm9::chr1:137744636..137744654,+#_d2bd01b713192d076f8327f952866dcep@chr1:137744636..137744654, +
8.14e-77FFCP PHASE1:Mm9::chr1:137744333..137744352,-#_d2bd01b713192d076f8327f952866dcep@chr1:137744333..137744352, -
8.14e-77FFCP PHASE2:Mm9::chr1:137747382..137747385,-#_d2bd01b713192d076f8327f952866dcep@chr1:137747382..137747385, -
8.14e-77FFCP PHASE2:Mm9::chr14:55584663..55584731,-#_d2bd01b713192d076f8327f952866dcep@chr14:55584663..55584731, -
8.14e-77FFCP PHASE1:Mm9::chr14:55572120..55572173,+#_d2bd01b713192d076f8327f952866dcep@chr14:55572120..55572173, +
8.14e-77FFCP PHASE2:Mm9::chr1:137743272..137743307,+#_d2bd01b713192d076f8327f952866dcep@chr1:137743272..137743307, +
8.14e-77FFCP PHASE2:Mm9::chr14:55581579..55581620,-#_d2bd01b713192d076f8327f952866dcep@chr14:55581579..55581620, -
8.14e-77FFCP PHASE2:Mm9::chr14:55571909..55571953,-#_d2bd01b713192d076f8327f952866dcep@chr14:55571909..55571953, -
8.14e-77FFCP PHASE1:Mm9::chr14:55584197..55584239,-#_d2bd01b713192d076f8327f952866dcep@chr14:55584197..55584239, -
8.14e-77FFCP PHASE1:Mm9::chr14:55565785..55565833,-#_d2bd01b713192d076f8327f952866dcep@chr14:55565785..55565833, -
8.14e-77FFCP PHASE1:Mm9::chr1:137745434..137745445,+#_d2bd01b713192d076f8327f952866dcep@chr1:137745434..137745445, +
8.14e-77FFCP PHASE1:Mm9::chr14:55581579..55581620,-#_d2bd01b713192d076f8327f952866dcep@chr14:55581579..55581620, -
8.14e-77FFCP PHASE2:Mm9::chr14:55565785..55565833,-#_d2bd01b713192d076f8327f952866dcep@chr14:55565785..55565833, -
8.14e-77FFCP PHASE1:Mm9::chr1:137744550..137744565,+#_d2bd01b713192d076f8327f952866dcep@chr1:137744550..137744565, +
8.14e-77FFCP PHASE2:Mm9::chr14:55568737..55568746,-#_d2bd01b713192d076f8327f952866dcep@chr14:55568737..55568746, -
8.14e-77FFCP PHASE1:Mm9::chr1:137747382..137747385,-#_d2bd01b713192d076f8327f952866dcep@chr1:137747382..137747385, -
8.14e-77FFCP PHASE1:Mm9::chr14:55584663..55584731,-#_d2bd01b713192d076f8327f952866dcep@chr14:55584663..55584731, -
8.14e-77FFCP PHASE1:Mm9::chr5:120286706..120286736,+#_d2bd01b713192d076f8327f952866dcep@chr5:120286706..120286736, +
8.14e-77FFCP PHASE2:Mm9::chr1:137745434..137745445,+#_d2bd01b713192d076f8327f952866dcep@chr1:137745434..137745445, +
8.14e-77FFCP PHASE1:Mm9::chr1:137744636..137744654,+#_d2bd01b713192d076f8327f952866dcep@chr1:137744636..137744654, +
8.14e-77FFCP PHASE2:Mm9::chr14:55568937..55568988,-#_d2bd01b713192d076f8327f952866dcep@chr14:55568937..55568988, -
8.14e-77FFCP PHASE1:Mm9::chr19:36193772..36193793,-#_d2bd01b713192d076f8327f952866dcep@chr19:36193772..36193793, -
8.14e-77FFCP PHASE1:Mm9::chr11:65461897..65461929,-#_d2bd01b713192d076f8327f952866dcep@chr11:65461897..65461929, -
8.14e-77FFCP PHASE2:Mm9::chr1:137747289..137747313,+#_d2bd01b713192d076f8327f952866dcep@chr1:137747289..137747313, +
8.14e-77FFCP PHASE2:Mm9::chr11:58815923..58815951,-#_d2bd01b713192d076f8327f952866dcep@chr11:58815923..58815951, -
8.14e-77FFCP PHASE1:Mm9::chr14:55568790..55568803,-#_d2bd01b713192d076f8327f952866dcep@chr14:55568790..55568803, -
8.14e-77FFCP PHASE2:Mm9::chr1:137744611..137744621,+#_d2bd01b713192d076f8327f952866dcep@chr1:137744611..137744621, +
8.14e-77FFCP PHASE1:Mm9::chr15:88850827..88850850,+#_d2bd01b713192d076f8327f952866dcep2@Mov10l1
8.14e-77FFCP PHASE1:Mm9::chr14:55571909..55571953,-#_d2bd01b713192d076f8327f952866dcep@chr14:55571909..55571953, -
8.14e-77FFCP PHASE2:Mm9::chr14:55579265..55579297,-#_d2bd01b713192d076f8327f952866dcep@chr14:55579265..55579297, -
8.14e-77FFCP PHASE1:Mm9::chr14:55563577..55563611,-#_d2bd01b713192d076f8327f952866dcep@chr14:55563577..55563611, -
8.14e-77FFCP PHASE2:Mm9::chr1:137744333..137744352,-#_d2bd01b713192d076f8327f952866dcep@chr1:137744333..137744352, -
8.14e-77FFCP PHASE1:Mm9::chr1:137744668..137744681,-#_d2bd01b713192d076f8327f952866dcep@chr1:137744668..137744681, -
8.14e-77FFCP PHASE2:Mm9::chr14:55584197..55584239,-#_d2bd01b713192d076f8327f952866dcep@chr14:55584197..55584239, -
8.14e-77FFCP PHASE2:Mm9::chr14:55563577..55563611,-#_d2bd01b713192d076f8327f952866dcep@chr14:55563577..55563611, -
8.14e-77FFCP PHASE1:Mm9::chr1:137743272..137743307,+#_d2bd01b713192d076f8327f952866dcep@chr1:137743272..137743307, +
8.14e-77FFCP PHASE1:Mm9::chr1:137747289..137747313,+#_d2bd01b713192d076f8327f952866dcep@chr1:137747289..137747313, +
8.14e-77FFCP PHASE1:Mm9::chr14:55584272..55584298,-#_d2bd01b713192d076f8327f952866dcep@chr14:55584272..55584298, -
8.14e-77FFCP PHASE2:Mm9::chr1:137744668..137744681,-#_d2bd01b713192d076f8327f952866dcep@chr1:137744668..137744681, -
8.14e-77FFCP PHASE1:Mm9::chr11:58815923..58815951,-#_d2bd01b713192d076f8327f952866dcep@chr11:58815923..58815951, -
8.14e-77FFCP PHASE1:Mm9::chr14:55568737..55568746,-#_d2bd01b713192d076f8327f952866dcep@chr14:55568737..55568746, -
8.14e-77FFCP PHASE2:Mm9::chr1:137744550..137744565,+#_d2bd01b713192d076f8327f952866dcep@chr1:137744550..137744565, +
8.14e-77FFCP PHASE2:Mm9::chr5:120286706..120286736,+#_d2bd01b713192d076f8327f952866dcep@chr5:120286706..120286736, +
8.14e-77FFCP PHASE1:Mm9::chr14:55586837..55586880,-#_d2bd01b713192d076f8327f952866dcep@chr14:55586837..55586880, -
8.14e-77FFCP PHASE2:Mm9::chr4:147375901..147375913,+#_d2bd01b713192d076f8327f952866dcep@chr4:147375901..147375913, +
8.14e-77FFCP PHASE2:Mm9::chr14:55572120..55572173,+#_d2bd01b713192d076f8327f952866dcep@chr14:55572120..55572173, +
8.14e-77FFCP PHASE2:Mm9::chr19:36193772..36193793,-#_d2bd01b713192d076f8327f952866dcep@chr19:36193772..36193793, -
8.14e-77FFCP PHASE2:Mm9::chr14:55586837..55586880,-#_d2bd01b713192d076f8327f952866dcep@chr14:55586837..55586880, -
8.14e-77FFCP PHASE1:Mm9::chr14:55568937..55568988,-#_d2bd01b713192d076f8327f952866dcep@chr14:55568937..55568988, -
8.14e-77FFCP PHASE2:Mm9::chr15:88850827..88850850,+#_d2bd01b713192d076f8327f952866dcep2@Mov10l1
8.14e-77FFCP PHASE1:Mm9::chr1:137744611..137744621,+#_d2bd01b713192d076f8327f952866dcep@chr1:137744611..137744621, +
8.14e-77FFCP PHASE2:Mm9::chr14:55568790..55568803,-#_d2bd01b713192d076f8327f952866dcep@chr14:55568790..55568803, -
8.14e-77FFCP PHASE1:Mm9::chr14:55579265..55579297,-#_d2bd01b713192d076f8327f952866dcep@chr14:55579265..55579297, -
8.14e-77FFCP PHASE2:Mm9::chr1:137747953..137747967,-#_d2bd01b713192d076f8327f952866dcep@chr1:137747953..137747967, -
8.14e-77FFCP PHASE1:Mm9::chr1:137747953..137747967,-#_d2bd01b713192d076f8327f952866dcep@chr1:137747953..137747967, -
1.2e-73FFCP PHASE2:Mm9::chr1:137742152..137742184,-#_ec2a31e0b1ae70cf1ad5f9198867a36ap@chr1:137742152..137742184, -
1.2e-73FFCP PHASE1:Mm9::chr1:137742152..137742184,-#_ec2a31e0b1ae70cf1ad5f9198867a36ap@chr1:137742152..137742184, -
1.46e-72FFCP PHASE2:Mm9::chr16:5431481..5431510,+#_e93265c8c4b2927a7e6178d2391b24ddp@chr16:5431481..5431510, +
1.46e-72FFCP PHASE1:Mm9::chr7:4473478..4473505,-#_e93265c8c4b2927a7e6178d2391b24ddp2@Tnni3
1.46e-72FFCP PHASE1:Mm9::chr1:137742470..137742481,+#_e93265c8c4b2927a7e6178d2391b24ddp@chr1:137742470..137742481, +
1.46e-72FFCP PHASE1:Mm9::chr14:55577329..55577367,-#_e93265c8c4b2927a7e6178d2391b24ddp@chr14:55577329..55577367, -
1.46e-72FFCP PHASE1:Mm9::chr16:5431481..5431510,+#_e93265c8c4b2927a7e6178d2391b24ddp@chr16:5431481..5431510, +
1.46e-72FFCP PHASE2:Mm9::chr7:4473478..4473505,-#_e93265c8c4b2927a7e6178d2391b24ddp2@Tnni3
1.46e-72FFCP PHASE2:Mm9::chr14:55577329..55577367,-#_e93265c8c4b2927a7e6178d2391b24ddp@chr14:55577329..55577367, -
1.46e-72FFCP PHASE2:Mm9::chr1:137742470..137742481,+#_e93265c8c4b2927a7e6178d2391b24ddp@chr1:137742470..137742481, +
1.63e-72FFCP PHASE1:Mm9::chr2:113880065..113880076,+#_02a8e1f343326a593fe9f7b463186092p1@ENSMUST00000154140
1.63e-72FFCP PHASE2:Mm9::chr2:113880065..113880076,+#_02a8e1f343326a593fe9f7b463186092p1@ENSMUST00000154140
1.63e-72FFCP PHASE1:Mm9::chr19:36193739..36193752,-#_02a8e1f343326a593fe9f7b463186092p@chr19:36193739..36193752, -
1.63e-72FFCP PHASE2:Mm9::chr19:36193739..36193752,-#_02a8e1f343326a593fe9f7b463186092p@chr19:36193739..36193752, -
1.63e-72FFCP PHASE1:Mm9::chr16:38713504..38713520,-#_02a8e1f343326a593fe9f7b463186092p11@Arhgap31
1.63e-72FFCP PHASE1:Mm9::chr10:53062244..53062249,+#_02a8e1f343326a593fe9f7b463186092p@chr10:53062244..53062249, +
1.63e-72FFCP PHASE2:Mm9::chr5:58108164..58108178,+#_02a8e1f343326a593fe9f7b463186092p@chr5:58108164..58108178, +
1.63e-72FFCP PHASE2:Mm9::chr10:53062244..53062249,+#_02a8e1f343326a593fe9f7b463186092p@chr10:53062244..53062249, +
1.63e-72FFCP PHASE1:Mm9::chr2:17382210..17382221,-#_02a8e1f343326a593fe9f7b463186092p5@Nebl
1.63e-72FFCP PHASE2:Mm9::chr16:38713504..38713520,-#_02a8e1f343326a593fe9f7b463186092p11@Arhgap31
1.63e-72FFCP PHASE1:Mm9::chr5:58108164..58108178,+#_02a8e1f343326a593fe9f7b463186092p@chr5:58108164..58108178, +
1.63e-72FFCP PHASE2:Mm9::chr2:17382210..17382221,-#_02a8e1f343326a593fe9f7b463186092p5@Nebl
1.82e-72FFCP PHASE2:Mm9::chr9:24529233..24529237,-#_0179a73c175d7959616a6b7ee0949ba8p@chr9:24529233..24529237, -
1.82e-72FFCP PHASE1:Mm9::chr9:24529233..24529237,-#_0179a73c175d7959616a6b7ee0949ba8p@chr9:24529233..24529237, -
2.03e-72FFCP PHASE2:Mm9::chr2:30851059..30851089,+#_86569bc20f9f43766a8e10854c817212p6@Usp20
2.03e-72FFCP PHASE1:Mm9::chr2:30851059..30851089,+#_86569bc20f9f43766a8e10854c817212p6@Usp20

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0009881&oldid=3277982"