FFCP PHASE1:Hg19::chr10:14646572..14646575,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:14646572..14646575,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_at_chr10:14646572..14646575,+ | |description=CAGE_peak_at_chr10:14646572..14646575,+ | ||
|id=chr10:14646572..14646575,+ | |id=chr10:14646572..14646575,+ | ||
|ontology_enrichment_celltype=CL:0000738!5.39e-49!140;CL:0002057!1.75e-45!42;CL:0000860!1.03e-41!45;CL:0002031!4.23e-39!124;CL:0000037!3.01e-36!172;CL:0000566!3.01e-36!172;CL:0002087!5.94e-36!119;CL:0002032!2.41e-34!165;CL:0000837!2.41e-34!165;CL:0000766!3.23e-34!76;CL:0000988!3.43e-33!182;CL:0000557!4.68e-33!71;CL:0000839!9.17e-30!70;CL:0002009!9.43e-29!65;CL:0002194!3.91e-26!63;CL:0000576!3.91e-26!63;CL:0000040!3.91e-26!63;CL:0000559!3.91e-26!63;CL:0000763!1.27e-25!112;CL:0000049!1.27e-25!112;CL:0000134!8.99e-12!358;CL:0002320!3.45e-11!365;CL:0000219!1.20e-09!390;CL:0000453!2.38e-09!5;CL:0000838!1.96e-08!52;CL:0002393!2.96e-08!9;CL:0002397!2.96e-08!9;CL:0000542!3.47e-08!53;CL:0000051!3.47e-08!53;CL:0000048!1.12e-07!430;CL:0000034!2.31e-07!444;CL:0000723!2.50e-07!436;CL:0000623!5.08e-07!3;CL:0000825!5.08e-07!3;CL:0000767!5.29e-07!3;CL:0002274!5.70e-07!5;CL:0000457!5.70e-07!5;CL:0002191!5.70e-07!5;CL:0000097!5.70e-07!5;CL:0000831!5.70e-07!5;CL:0002028!5.70e-07!5 | |ontology_enrichment_celltype=CL:0000738!5.39e-49!140;CL:0002057!1.75e-45!42;CL:0000860!1.03e-41!45;CL:0002031!4.23e-39!124;CL:0000037!3.01e-36!172;CL:0000566!3.01e-36!172;CL:0002087!5.94e-36!119;CL:0002032!2.41e-34!165;CL:0000837!2.41e-34!165;CL:0000766!3.23e-34!76;CL:0000988!3.43e-33!182;CL:0000557!4.68e-33!71;CL:0000839!9.17e-30!70;CL:0002009!9.43e-29!65;CL:0002194!3.91e-26!63;CL:0000576!3.91e-26!63;CL:0000040!3.91e-26!63;CL:0000559!3.91e-26!63;CL:0000763!1.27e-25!112;CL:0000049!1.27e-25!112;CL:0000134!8.99e-12!358;CL:0002320!3.45e-11!365;CL:0000219!1.20e-09!390;CL:0000453!2.38e-09!5;CL:0000838!1.96e-08!52;CL:0002393!2.96e-08!9;CL:0002397!2.96e-08!9;CL:0000542!3.47e-08!53;CL:0000051!3.47e-08!53;CL:0000048!1.12e-07!430;CL:0000034!2.31e-07!444;CL:0000723!2.50e-07!436;CL:0000623!5.08e-07!3;CL:0000825!5.08e-07!3;CL:0000767!5.29e-07!3;CL:0002274!5.70e-07!5;CL:0000457!5.70e-07!5;CL:0002191!5.70e-07!5;CL:0000097!5.70e-07!5;CL:0000831!5.70e-07!5;CL:0002028!5.70e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.66e-31;33!CL:0002057;2.66e-31;33!CL:0000576;1.04e-20;48!CL:0000473;8.01e-20;39!CL:0000234;8.01e-20;39!CL:0000766;3.43e-16;69!CL:0002393;1.27e-12;6!CL:0002397;1.27e-12;6!CL:0002087;8.00e-12;104!CL:0000767;5.71e-11;3!CL:0000094;3.00e-09;8!CL:0000763;1.11e-08;100!CL:0000081;7.51e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.09e-38,42;CL:0002057,1.09e-38,42;CL:0000766,7.16e-35,72;CL:0000473,1.62e-33,48;CL:0000234,1.62e-33,48;CL:0000738,1.55e-28,136;CL:0000839,1.15e-26,66;CL:0002194,2.85e-26,59;CL:0000576,2.85e-26,59;CL:0000040,2.85e-26,59;CL:0000559,2.85e-26,59;CL:0000557,3.13e-26,67;CL:0002009,2.46e-25,61;CL:0002031,1.98e-24,120;CL:0002032,1.56e-23,161;CL:0000837,1.56e-23,161;CL:0002087,5.43e-23,115;CL:0000037,2.13e-22,168;CL:0000763,3.10e-22,108;CL:0000049,3.10e-22,108;CL:0000988,4.56e-21,177;CL:0000767,5.16e-11,3;CL:0000094,2.84e-09,8;CL:0002393,1.43e-08,9;CL:0002397,1.43e-08,9;CL:0000134,1.57e-08,354;CL:0002320,2.77e-08,361;CL:0000219,2.05e-07,386;CL:0000081,7.21e-07,11;CL:0000034,8.10e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.89e-25;42!UBERON:0005754;2.40e-09;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.31e-28!80;UBERON:0001474!3.17e-25!86;UBERON:0002390!1.36e-24!102;UBERON:0003061!1.36e-24!102;UBERON:0002193!2.88e-21!112;UBERON:0004765!9.30e-20!101;UBERON:0001434!9.30e-20!101;UBERON:0002405!6.23e-17!115;UBERON:0002384!2.14e-10!375;UBERON:0003081!8.07e-10!216;UBERON:0002204!2.09e-08!167 | |ontology_enrichment_uberon=UBERON:0002371!5.31e-28!80;UBERON:0001474!3.17e-25!86;UBERON:0002390!1.36e-24!102;UBERON:0003061!1.36e-24!102;UBERON:0002193!2.88e-21!112;UBERON:0004765!9.30e-20!101;UBERON:0001434!9.30e-20!101;UBERON:0002405!6.23e-17!115;UBERON:0002384!2.14e-10!375;UBERON:0003081!8.07e-10!216;UBERON:0002204!2.09e-08!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0000998;2.40e-09;1!UBERON:0006868;2.40e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.00e-23,76;UBERON:0001474,5.82e-21,82;UBERON:0004765,7.36e-19,90;UBERON:0002405,3.66e-18,93;UBERON:0002390,4.26e-17,98;UBERON:0003061,4.26e-17,98;UBERON:0001434,1.06e-16,100;UBERON:0002193,2.95e-15,108;UBERON:0000998,2.40e-09,1;UBERON:0006868,2.40e-09,1;UBERON:0002204,7.43e-09,167;UBERON:0002384,6.00e-08,371;UBERON:0003081,7.38e-08,203 | |||
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|short_description=p@chr10:14646572..14646575,+ | |short_description=p@chr10:14646572..14646575,+ | ||
}} | }} |
Latest revision as of 12:02, 23 July 2015
Short description: | p@chr10:14646572..14646575, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:14646572..14646575, + |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.09e-38 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.09e-38 | 42 |
myeloid leukocyte | 7.16e-35 | 72 |
defensive cell | 1.62e-33 | 48 |
phagocyte | 1.62e-33 | 48 |
leukocyte | 1.55e-28 | 136 |
myeloid lineage restricted progenitor cell | 1.15e-26 | 66 |
monopoietic cell | 2.85e-26 | 59 |
monocyte | 2.85e-26 | 59 |
monoblast | 2.85e-26 | 59 |
promonocyte | 2.85e-26 | 59 |
granulocyte monocyte progenitor cell | 3.13e-26 | 67 |
macrophage dendritic cell progenitor | 2.46e-25 | 61 |
hematopoietic lineage restricted progenitor cell | 1.98e-24 | 120 |
hematopoietic oligopotent progenitor cell | 1.56e-23 | 161 |
hematopoietic multipotent progenitor cell | 1.56e-23 | 161 |
nongranular leukocyte | 5.43e-23 | 115 |
hematopoietic stem cell | 2.13e-22 | 168 |
myeloid cell | 3.10e-22 | 108 |
common myeloid progenitor | 3.10e-22 | 108 |
hematopoietic cell | 4.56e-21 | 177 |
basophil | 5.16e-11 | 3 |
granulocyte | 2.84e-09 | 8 |
intermediate monocyte | 1.43e-08 | 9 |
CD14-positive, CD16-positive monocyte | 1.43e-08 | 9 |
mesenchymal cell | 1.57e-08 | 354 |
connective tissue cell | 2.77e-08 | 361 |
motile cell | 2.05e-07 | 386 |
blood cell | 7.21e-07 | 11 |
stem cell | 8.10e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.00e-23 | 76 |
bone element | 5.82e-21 | 82 |
skeletal element | 7.36e-19 | 90 |
immune system | 3.66e-18 | 93 |
hematopoietic system | 4.26e-17 | 98 |
blood island | 4.26e-17 | 98 |
skeletal system | 1.06e-16 | 100 |
hemolymphoid system | 2.95e-15 | 108 |
seminal vesicle | 2.40e-09 | 1 |
seminal fluid secreting gland | 2.40e-09 | 1 |
musculoskeletal system | 7.43e-09 | 167 |
connective tissue | 6.00e-08 | 371 |
lateral plate mesoderm | 7.38e-08 | 203 |