FFCP PHASE1:Hg19::chr10:17277221..17277254,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-389bp_to_ENST00000456355_5end | |association_with_transcript=-389bp_to_ENST00000456355_5end | ||
|cluster_id=chr10:17277221..17277254,- | |||
|coexpression_cluster_id=C490 | |||
|description=CAGE_peak_3_at_ENST00000456355_5end | |description=CAGE_peak_3_at_ENST00000456355_5end | ||
|id=chr10:17277221..17277254,- | |id=chr10:17277221..17277254,- | ||
|ontology_enrichment_celltype=CL:0000055!2.69e-33!180;CL:0002371!1.26e-25!591;CL:0000144!4.18e-22!625;CL:0000057!7.72e-19!75;CL:0000048!6.83e-18!430;CL:0000723!1.03e-16!436;CL:0000034!1.89e-15!444;CL:0000222!3.84e-14!119;CL:0000680!2.87e-13!57;CL:0000056!2.87e-13!57;CL:0000355!2.87e-13!57;CL:0000548!3.06e-13!679;CL:0000004!3.06e-13!679;CL:0000255!3.06e-13!679;CL:0000012!4.65e-13!682;CL:0000183!7.06e-13!59;CL:0000187!1.04e-12!54;CL:0000393!5.71e-12!60;CL:0000211!5.71e-12!60;CL:0000192!8.25e-11!42;CL:0000514!8.25e-11!42;CL:0000359!5.66e-10!32;CL:0002620!7.71e-10!23;CL:0000003!1.91e-09!722;CL:0002320!1.74e-08!365;CL:0000219!1.84e-07!390;CL:0000134!3.43e-07!358 | |ontology_enrichment_celltype=CL:0000055!2.69e-33!180;CL:0002371!1.26e-25!591;CL:0000144!4.18e-22!625;CL:0000057!7.72e-19!75;CL:0000048!6.83e-18!430;CL:0000723!1.03e-16!436;CL:0000034!1.89e-15!444;CL:0000222!3.84e-14!119;CL:0000680!2.87e-13!57;CL:0000056!2.87e-13!57;CL:0000355!2.87e-13!57;CL:0000548!3.06e-13!679;CL:0000004!3.06e-13!679;CL:0000255!3.06e-13!679;CL:0000012!4.65e-13!682;CL:0000183!7.06e-13!59;CL:0000187!1.04e-12!54;CL:0000393!5.71e-12!60;CL:0000211!5.71e-12!60;CL:0000192!8.25e-11!42;CL:0000514!8.25e-11!42;CL:0000359!5.66e-10!32;CL:0002620!7.71e-10!23;CL:0000003!1.91e-09!722;CL:0002320!1.74e-08!365;CL:0000219!1.84e-07!390;CL:0000134!3.43e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.61e-10;23!CL:0000359;5.23e-10;32!CL:0000192;1.58e-08;43!CL:0000057;3.44e-08;73!CL:0000187;9.79e-08;55!CL:0000393;4.29e-07;61!CL:0000211;4.29e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.79e-20,76;CL:0000048,7.23e-20,427;CL:0000723,1.03e-18,433;CL:0000034,5.65e-17,441;CL:0000222,8.43e-15,121;CL:0000680,1.89e-14,58;CL:0000056,1.89e-14,58;CL:0000355,1.89e-14,58;CL:0000187,7.44e-14,55;CL:0000393,5.55e-13,61;CL:0000211,5.55e-13,61;CL:0000192,1.20e-11,43;CL:0000514,1.20e-11,43;CL:0000359,1.65e-10,32;CL:0002620,2.29e-10,23;CL:0002320,3.09e-09,361;CL:0000219,5.86e-08,386;CL:0000134,7.86e-08,354 | |||
|ontology_enrichment_development_v019=CL:0000514;1.58e-08;43!CL:0000355;9.44e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!6.75e-18!83;UBERON:0002329!6.75e-18!83;UBERON:0003077!6.75e-18!83;UBERON:0003059!6.75e-18!83;UBERON:0007282!6.75e-18!83;UBERON:0009618!6.75e-18!83;UBERON:0007285!6.75e-18!83;UBERON:0004535!1.52e-17!110;UBERON:0003081!2.66e-17!216;UBERON:0002204!7.71e-17!167;UBERON:0002049!1.61e-16!79;UBERON:0007798!1.61e-16!79;UBERON:0001009!2.00e-16!113;UBERON:0004290!6.64e-16!70;UBERON:0004872!7.09e-16!84;UBERON:0000055!1.20e-14!69;UBERON:0001981!2.57e-14!60;UBERON:0007500!2.57e-14!60;UBERON:0004537!2.57e-14!60;UBERON:0006965!2.57e-14!60;UBERON:0000486!4.09e-14!82;UBERON:0001637!1.39e-13!42;UBERON:0003509!1.39e-13!42;UBERON:0004572!1.39e-13!42;UBERON:0000926!2.67e-12!448;UBERON:0004120!2.67e-12!448;UBERON:0006603!2.67e-12!448;UBERON:0001134!8.10e-12!61;UBERON:0002036!8.10e-12!61;UBERON:0003082!8.10e-12!61;UBERON:0002385!3.18e-11!63;UBERON:0001015!3.18e-11!63;UBERON:0000383!3.18e-11!63;UBERON:0004573!1.02e-10!33;UBERON:0004571!1.02e-10!33;UBERON:0002199!1.71e-08!45;UBERON:0002416!1.71e-08!45;UBERON:0003914!1.84e-08!118;UBERON:0002384!2.30e-08!375;UBERON:0000468!9.61e-08!659;UBERON:0005256!1.95e-07!143;UBERON:0000947!2.50e-07!21;UBERON:0010191!2.50e-07!21;UBERON:0001013!4.43e-07!14;UBERON:0000480!5.70e-07!626;UBERON:0000467!7.68e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;9.30e-11;42!UBERON:0003509;9.30e-11;42!UBERON:0004572;9.30e-11;42!UBERON:0004573;2.16e-10;33!UBERON:0004571;2.16e-10;33!UBERON:0007500;4.03e-09;56!UBERON:0001981;4.03e-09;56!UBERON:0004537;4.03e-09;56!UBERON:0002049;5.52e-08;75!UBERON:0007798;5.52e-08;75!UBERON:0000947;9.35e-08;21!UBERON:0010191;9.35e-08;21!UBERON:0001013;1.95e-07;14!UBERON:0000055;1.99e-07;65!UBERON:0002384;9.10e-07;198!UBERON:0003914;9.75e-07;74 | |||
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| ||
|short_description=p3@ENST00000456355 | |short_description=p3@ENST00000456355 | ||
}} | }} |
Latest revision as of 12:17, 23 July 2015
Short description: | p3@ENST00000456355 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000456355_5end |
Coexpression cluster: | C490_Hair_Fibroblast_Synoviocyte_Olfactory_Preadipocyte_Endothelial_Osteoblast |
Association with transcript: | -389bp_to_ENST00000456355_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.79e-20 | 76 |
multi fate stem cell | 7.23e-20 | 427 |
somatic stem cell | 1.03e-18 | 433 |
stem cell | 5.65e-17 | 441 |
mesodermal cell | 8.43e-15 | 121 |
muscle precursor cell | 1.89e-14 | 58 |
myoblast | 1.89e-14 | 58 |
multi-potent skeletal muscle stem cell | 1.89e-14 | 58 |
muscle cell | 7.44e-14 | 55 |
electrically responsive cell | 5.55e-13 | 61 |
electrically active cell | 5.55e-13 | 61 |
smooth muscle cell | 1.20e-11 | 43 |
smooth muscle myoblast | 1.20e-11 | 43 |
vascular associated smooth muscle cell | 1.65e-10 | 32 |
skin fibroblast | 2.29e-10 | 23 |
connective tissue cell | 3.09e-09 | 361 |
motile cell | 5.86e-08 | 386 |
mesenchymal cell | 7.86e-08 | 354 |