FFCP PHASE1:Hg19::chr10:24331232..24331243,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:24331232..24331243,+ | |||
|coexpression_cluster_id=C30 | |coexpression_cluster_id=C30 | ||
|description=CAGE_peak_at_chr10:24331232..24331243,+ | |description=CAGE_peak_at_chr10:24331232..24331243,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000306;1.86e-07;4!CL:0002222;1.86e-07;4!CL:0002224;1.86e-07;4 | |ontology_enrichment_celltype_v019=CL:0000306;1.86e-07;4!CL:0002222;1.86e-07;4!CL:0002224;1.86e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000306,2.04e-07,4;CL:0002222,2.04e-07,4;CL:0002224,2.04e-07,4 | |||
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|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr10:24331232..24331243,+ | |short_description=p@chr10:24331232..24331243,+ | ||
}} | }} |
Latest revision as of 12:41, 23 July 2015
Short description: | p@chr10:24331232..24331243, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:24331232..24331243, + |
Coexpression cluster: | C30_thyroid_throat_mesothelioma_mucinous_trachea_chorionic_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 2.04e-07 | 4 |
vertebrate lens cell | 2.04e-07 | 4 |
lens epithelial cell | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
throat | 1.88e-50 | 2 |
male genital duct | 1.08e-33 | 3 |
internal male genitalia | 1.08e-33 | 3 |
seminal vesicle | 5.93e-26 | 1 |
seminal fluid secreting gland | 5.93e-26 | 1 |
epididymis | 7.62e-26 | 1 |
duct of male reproductive system | 1.43e-25 | 4 |
mesonephros | 5.83e-12 | 9 |
pronephros | 5.83e-12 | 9 |
nephrogenic cord | 5.83e-12 | 9 |
pronephric mesoderm | 5.83e-12 | 9 |
rostral part of nephrogenic cord | 5.83e-12 | 9 |
presumptive pronephric mesoderm | 5.83e-12 | 9 |
neck | 5.69e-11 | 10 |
male reproductive organ | 5.79e-10 | 11 |
urogenital ridge | 5.79e-10 | 11 |
kidney | 3.25e-09 | 26 |
kidney mesenchyme | 3.25e-09 | 26 |
upper urinary tract | 3.25e-09 | 26 |
kidney rudiment | 3.25e-09 | 26 |
kidney field | 3.25e-09 | 26 |
intraembryonic coelom | 3.27e-09 | 12 |
cavitated compound organ | 7.90e-08 | 31 |
cuboidal epithelium | 2.04e-07 | 4 |
transparent eye structure | 2.04e-07 | 4 |
simple cuboidal epithelium | 2.04e-07 | 4 |
cranial placode | 2.04e-07 | 4 |
lens of camera-type eye | 2.04e-07 | 4 |
epithelium of lens | 2.04e-07 | 4 |
lens placode | 2.04e-07 | 4 |
lens vesicle | 2.04e-07 | 4 |