FFCP PHASE1:Hg19::chr10:7780631..7780640,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:7780631..7780640,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_at_chr10:7780631..7780640,+ | |description=CAGE_peak_at_chr10:7780631..7780640,+ | ||
|id=chr10:7780631..7780640,+ | |id=chr10:7780631..7780640,+ | ||
|ontology_enrichment_celltype=CL:0000181!1.06e-47!12;CL:0000417!1.06e-47!12;CL:0000668!1.06e-47!12;CL:0000414!1.06e-47!12;CL:0000412!1.06e-47!12;CL:0000182!1.06e-47!12;CL:0000223!2.93e-09!59 | |ontology_enrichment_celltype=CL:0000181!1.06e-47!12;CL:0000417!1.06e-47!12;CL:0000668!1.06e-47!12;CL:0000414!1.06e-47!12;CL:0000412!1.06e-47!12;CL:0000182!1.06e-47!12;CL:0000223!2.93e-09!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.01e-51;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,8.60e-52,12;CL:0000223,5.27e-11,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;7.08e-56;11!UBERON:0009497;2.27e-47;13!UBERON:0001041;8.65e-21;30!UBERON:0003104;4.53e-20;31!CL:0000223;1.16e-08;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.54e-49!19;UBERON:0006925!2.54e-49!19;UBERON:0008836!2.54e-49!19;UBERON:0008835!1.76e-42!22;UBERON:0003894!1.76e-42!22;UBERON:0009854!1.35e-40!23;UBERON:0007499!2.81e-37!25;UBERON:0009497!2.81e-37!25;UBERON:0000015!2.81e-37!25;UBERON:0002423!2.81e-37!25;UBERON:0006235!2.81e-37!25;UBERON:0004161!2.81e-37!25;UBERON:0005057!8.26e-36!26;UBERON:0009856!8.26e-36!26;UBERON:0002365!6.93e-30!31;UBERON:0002330!6.93e-30!31;UBERON:0002368!2.31e-26!35;UBERON:0000949!2.76e-20!45;UBERON:0003929!9.80e-17!54;UBERON:0005172!2.06e-16!55;UBERON:0005173!2.06e-16!55;UBERON:0002530!3.15e-15!59;UBERON:0002417!1.08e-14!61;UBERON:0000916!1.08e-14!61;UBERON:0003112!6.06e-13!1;UBERON:0000032!6.06e-13!1;UBERON:0005253!6.06e-13!1;UBERON:0003128!6.06e-13!1;UBERON:0002241!6.06e-13!1;UBERON:0001703!6.06e-13!1;UBERON:0004761!6.06e-13!1;UBERON:0009617!6.06e-13!1;UBERON:0005911!1.18e-10!82;UBERON:0004733!3.19e-09!12;UBERON:0002028!3.19e-09!12;UBERON:0007277!3.19e-09!12;UBERON:0001041!9.82e-09!98;UBERON:0004732!1.49e-08!13;UBERON:0000466!4.23e-08!126;UBERON:0005177!6.63e-08!107;UBERON:0003076!1.76e-07!15;UBERON:0003057!1.76e-07!15;UBERON:0009569!2.00e-07!113;UBERON:0002405!3.33e-07!115;UBERON:0002360!4.42e-07!2;UBERON:0000094!4.42e-07!2;UBERON:0007645!4.42e-07!2;UBERON:0000025!4.59e-07!194;UBERON:0003914!4.62e-07!118;UBERON:0001048!4.93e-07!168;UBERON:0005256!5.44e-07!143 | |ontology_enrichment_uberon=UBERON:0002107!2.54e-49!19;UBERON:0006925!2.54e-49!19;UBERON:0008836!2.54e-49!19;UBERON:0008835!1.76e-42!22;UBERON:0003894!1.76e-42!22;UBERON:0009854!1.35e-40!23;UBERON:0007499!2.81e-37!25;UBERON:0009497!2.81e-37!25;UBERON:0000015!2.81e-37!25;UBERON:0002423!2.81e-37!25;UBERON:0006235!2.81e-37!25;UBERON:0004161!2.81e-37!25;UBERON:0005057!8.26e-36!26;UBERON:0009856!8.26e-36!26;UBERON:0002365!6.93e-30!31;UBERON:0002330!6.93e-30!31;UBERON:0002368!2.31e-26!35;UBERON:0000949!2.76e-20!45;UBERON:0003929!9.80e-17!54;UBERON:0005172!2.06e-16!55;UBERON:0005173!2.06e-16!55;UBERON:0002530!3.15e-15!59;UBERON:0002417!1.08e-14!61;UBERON:0000916!1.08e-14!61;UBERON:0003112!6.06e-13!1;UBERON:0000032!6.06e-13!1;UBERON:0005253!6.06e-13!1;UBERON:0003128!6.06e-13!1;UBERON:0002241!6.06e-13!1;UBERON:0001703!6.06e-13!1;UBERON:0004761!6.06e-13!1;UBERON:0009617!6.06e-13!1;UBERON:0005911!1.18e-10!82;UBERON:0004733!3.19e-09!12;UBERON:0002028!3.19e-09!12;UBERON:0007277!3.19e-09!12;UBERON:0001041!9.82e-09!98;UBERON:0004732!1.49e-08!13;UBERON:0000466!4.23e-08!126;UBERON:0005177!6.63e-08!107;UBERON:0003076!1.76e-07!15;UBERON:0003057!1.76e-07!15;UBERON:0009569!2.00e-07!113;UBERON:0002405!3.33e-07!115;UBERON:0002360!4.42e-07!2;UBERON:0000094!4.42e-07!2;UBERON:0007645!4.42e-07!2;UBERON:0000025!4.59e-07!194;UBERON:0003914!4.62e-07!118;UBERON:0001048!4.93e-07!168;UBERON:0005256!5.44e-07!143 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.06e-63;19!UBERON:0006925;2.06e-63;19!UBERON:0002423;2.77e-48;25!UBERON:0002365;3.81e-37;31!UBERON:0002330;3.81e-37;31!UBERON:0002368;4.26e-33;33!UBERON:0000949;5.21e-24;43!UBERON:0005172;2.38e-14;52!UBERON:0005173;2.38e-14;52!UBERON:0002530;1.73e-13;57!UBERON:0002417;9.18e-12;58!UBERON:0000916;9.18e-12;58!UBERON:0001007;8.97e-09;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.79e-63,19;UBERON:0006925,1.79e-63,19;UBERON:0008836,1.79e-63,19;UBERON:0008835,7.16e-55,22;UBERON:0003894,7.16e-55,22;UBERON:0009854,1.68e-52,23;UBERON:0007499,2.49e-48,25;UBERON:0009497,2.49e-48,25;UBERON:0000015,2.49e-48,25;UBERON:0002423,2.49e-48,25;UBERON:0006235,2.49e-48,25;UBERON:0004161,2.49e-48,25;UBERON:0009856,1.75e-46,26;UBERON:0002365,4.89e-39,31;UBERON:0002330,4.89e-39,31;UBERON:0002368,1.31e-34,35;UBERON:0000949,5.70e-27,45;UBERON:0003929,1.66e-22,54;UBERON:0005172,1.66e-22,54;UBERON:0005173,1.66e-22,54;UBERON:0002530,1.30e-20,59;UBERON:0002417,2.85e-20,60;UBERON:0000916,2.85e-20,60;UBERON:0005911,7.37e-15,82;UBERON:0001041,5.23e-14,87;UBERON:0005177,4.53e-12,101;UBERON:0009569,6.96e-11,112;UBERON:0003914,2.04e-10,117;UBERON:0004921,3.05e-10,118;UBERON:0005256,5.46e-10,122;UBERON:0001007,2.46e-08,145;UBERON:0001555,2.46e-08,145;UBERON:0007026,2.46e-08,145;UBERON:0000490,3.20e-08,148;UBERON:0001048,1.35e-07,160;UBERON:0003104,1.35e-07,160;UBERON:0009142,1.35e-07,160;UBERON:0004119,1.51e-07,160;UBERON:0000925,1.51e-07,160;UBERON:0006595,1.51e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6755034821831,6.87979051674338,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591095237907095,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12714592229504,1.97798060114799,2.15691340333392,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46552233678082,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6755034821831,6.87979051674338,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591095237907095,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12714592229504,1.97798060114799,2.15691340333392,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46552233678082,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:7780631..7780640,+ | |short_description=p@chr10:7780631..7780640,+ | ||
}} | }} |
Latest revision as of 15:45, 23 July 2015
Short description: | p@chr10:7780631..7780640, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:7780631..7780640, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 8.60e-52 | 12 |
endodermal cell | 5.27e-11 | 58 |