FFCP PHASE1:Hg19::chr10:8093226..8093237,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-266bp_to_ENST00000418270_5end | |association_with_transcript=-266bp_to_ENST00000418270_5end | ||
|cluster_id=chr10:8093226..8093237,+ | |||
|coexpression_cluster_id=C194 | |coexpression_cluster_id=C194 | ||
|description=CAGE_peak_2_at_ENST00000418270_5end | |description=CAGE_peak_2_at_ENST00000418270_5end | ||
|id=chr10:8093226..8093237,+ | |id=chr10:8093226..8093237,+ | ||
|ontology_enrichment_celltype=CL:0002541;1.60e-09;3!CL:0002577;1.60e-09;3!CL:0000214;1.60e-09;3!CL:0002327;1.59e-07;4 | |ontology_enrichment_celltype=CL:0002541!1.78e-15!3;CL:0002537!2.31e-09!5;CL:0000349!8.52e-08!3;CL:0002577!8.52e-08!3 | ||
| | |ontology_enrichment_celltype_v019=CL:0002541;1.60e-09;3!CL:0002577;1.60e-09;3!CL:0000214;1.60e-09;3!CL:0002327;1.59e-07;4 | ||
|ontology_enrichment_disease=DOID:5093;2.15e-56;4!DOID:1612;2.15e-56;4 | |ontology_enrichment_celltype_v019_2=CL:0002577,1.54e-09,3;CL:0000214,1.67e-09,3;CL:0002541,1.81e-09,3;CL:0002327,1.59e-07,4 | ||
|ontology_enrichment_uberon=UBERON:0000310;4.09e-23;10!UBERON:0001443;4.34e-21;11!UBERON:0006915;1.60e-09;3!UBERON:0007616;1.60e-09;3!UBERON:0002217;1.60e-09;3!UBERON:0002018;1.60e-09;3!UBERON:0003124;1.60e-09;3!UBERON:0000920;1.60e-09;3!UBERON:0001911;1.59e-07;4!UBERON:0001987;1.86e-07;4 | |ontology_enrichment_development_v019=UBERON:0008425;4.61e-26;1 | ||
|ontology_enrichment_disease=DOID:5093!4.32e-21!4;DOID:1612!4.32e-21!4;DOID:3095!5.75e-10!22;DOID:2994!5.75e-10!22;DOID:169!7.84e-08!6 | |||
|ontology_enrichment_disease_v019=DOID:5093;2.15e-56;4!DOID:1612;2.15e-56;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.15e-56,4;DOID:1612,2.15e-56,4 | |||
|ontology_enrichment_uberon=UBERON:0005631!5.38e-27!14;UBERON:0000158!5.38e-27!14;UBERON:0003124!8.53e-18!7;UBERON:0000476!1.78e-15!3;UBERON:0000920!1.78e-15!3;UBERON:0000478!4.42e-15!24;UBERON:0000305!2.87e-11!7;UBERON:0002148!3.98e-10!2;UBERON:0009662!3.98e-10!2;UBERON:0001255!4.17e-10!2;UBERON:0001556!4.17e-10!2;UBERON:0004871!7.16e-10!8;UBERON:0000013!2.59e-09!5;UBERON:0002410!2.59e-09!5;UBERON:0000310!1.79e-08!10;UBERON:0004923!2.96e-08!57;UBERON:0001443!1.06e-07!11;UBERON:0000988!4.99e-07!3;UBERON:0006331!4.99e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;4.09e-23;10!UBERON:0001443;4.34e-21;11!UBERON:0006915;1.60e-09;3!UBERON:0007616;1.60e-09;3!UBERON:0002217;1.60e-09;3!UBERON:0002018;1.60e-09;3!UBERON:0003124;1.60e-09;3!UBERON:0000920;1.60e-09;3!UBERON:0001911;1.59e-07;4!UBERON:0001987;1.86e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,4.10e-23,10;UBERON:0001443,4.34e-21,11;UBERON:0003124,5.41e-15,7;UBERON:0006915,1.67e-09,3;UBERON:0007616,1.67e-09,3;UBERON:0002217,1.67e-09,3;UBERON:0002018,1.67e-09,3;UBERON:0000920,1.81e-09,3;UBERON:0005631,5.55e-08,14;UBERON:0000158,5.55e-08,14;UBERON:0001911,1.59e-07,4;UBERON:0005333,1.59e-07,4;UBERON:0008425,1.59e-07,4;UBERON:0005311,1.59e-07,4;UBERON:0001987,1.80e-07,4;UBERON:0004340,1.80e-07,4 | |||
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|short_description=p2@ENST00000418270 | |short_description=p2@ENST00000418270 | ||
}} | }} |
Latest revision as of 15:53, 23 July 2015
Short description: | p2@ENST00000418270 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000418270_5end |
Coexpression cluster: | C194_MCF7_breast_prostate_Intestinal_diffuse_Wilms_Alveolar |
Association with transcript: | -266bp_to_ENST00000418270_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 1.54e-09 | 3 |
synovial cell | 1.67e-09 | 3 |
chorionic membrane mesenchymal stem cell | 1.81e-09 | 3 |
mammary gland epithelial cell | 1.59e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
breast | 4.10e-23 | 10 |
chest | 4.34e-21 | 11 |
chorion | 5.41e-15 | 7 |
stratified squamous epithelium | 1.67e-09 | 3 |
layer of synovial tissue | 1.67e-09 | 3 |
synovial joint | 1.67e-09 | 3 |
synovial membrane of synovial joint | 1.67e-09 | 3 |
egg chorion | 1.81e-09 | 3 |
extraembryonic membrane | 5.55e-08 | 14 |
membranous layer | 5.55e-08 | 14 |
mammary gland | 1.59e-07 | 4 |
mammary bud | 1.59e-07 | 4 |
mammary ridge | 1.59e-07 | 4 |
mammary placode | 1.59e-07 | 4 |
placenta | 1.80e-07 | 4 |
allantois | 1.80e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.15e-56 | 4 |
breast cancer | 2.15e-56 | 4 |