FFCP PHASE1:Hg19::chr10:86713933..86713937,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:86713933..86713937,- | |||
|coexpression_cluster_id=C984 | |||
|description=CAGE_peak_at_chr10:86713933..86713937,- | |description=CAGE_peak_at_chr10:86713933..86713937,- | ||
|id=chr10:86713933..86713937,- | |id=chr10:86713933..86713937,- | ||
|ontology_enrichment_celltype=CL:0000197!1.25e-09!6;CL:0000098!1.25e-09!6;CL:0002167!1.25e-09!6;CL:0002588!7.62e-07!2;CL:0002371!8.30e-07!591 | |ontology_enrichment_celltype=CL:0000197!1.25e-09!6;CL:0000098!1.25e-09!6;CL:0002167!1.25e-09!6;CL:0002588!7.62e-07!2;CL:0002371!8.30e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0000197;1.42e-20;6!CL:0000098;1.42e-20;6!CL:0002167;1.42e-20;6!CL:0002541;7.25e-19;3!CL:0002539;1.09e-12;10!CL:0000349;6.77e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,1.16e-20,6;CL:0000098,1.16e-20,6;CL:0002167,1.16e-20,6;CL:0002541,1.14e-18,3;CL:0002539,9.27e-13,10;CL:0000349,7.19e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;4.55e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.95e-09,14 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;7.25e-19;3!UBERON:0000920;7.25e-19;3!UBERON:0004237;1.09e-12;10!UBERON:0004695;1.09e-12;10!UBERON:0002111;1.09e-12;10!UBERON:0004178;1.09e-12;10!UBERON:0005631;1.27e-12;10!UBERON:0000158;1.27e-12;10!UBERON:0002118;1.66e-11;5!UBERON:0000947;1.87e-10;21!UBERON:0010191;1.87e-10;21!UBERON:0001135;1.20e-08;15!UBERON:0004573;8.20e-07;33!UBERON:0004571;8.20e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.14e-18,3;UBERON:0004237,9.27e-13,10;UBERON:0004695,9.27e-13,10;UBERON:0002111,9.27e-13,10;UBERON:0004178,9.27e-13,10;UBERON:0002118,1.67e-11,5;UBERON:0000947,1.87e-10,21;UBERON:0010191,1.87e-10,21;UBERON:0005631,3.85e-09,14;UBERON:0000158,3.85e-09,14;UBERON:0001135,1.08e-08,15;UBERON:0003124,1.53e-08,7;UBERON:0004573,9.99e-07,33;UBERON:0004571,9.99e-07,33 | |||
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|phase1_expression=0,0.428201047781966,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0.331397375727916,3.36162573225888,3.01347264011988,1.46062018077475,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05927344650575,0.573673241497627,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0.213557388818567,0.211931901159562,0,0,0,0,1.18143432568886,0,0,0,0.969876340912871,0.355009592516614,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,1.45579603071565,5.70972764150918,1.26161932027148,0.819989904948992,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,1.99500565274481,0.280660094433074,0,0,0,0,0,0.177561725313127,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0.145016693914229,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0.196498082026242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,1.43246690842614,0.890894042497916,0.307160702099232,0,0,0.111308705022906,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5270382711533,1.00757352742049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0.189403005275089,0.50313580350515,0,0,0,0,0,0,0,0,0.829412415681711,0,0.521745061811734,0,1.14241563650639,0,0,0,1.39210127963548,1.19428766609585,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93061915699296,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:86713933..86713937,- | |short_description=p@chr10:86713933..86713937,- | ||
}} | }} |
Latest revision as of 16:17, 23 July 2015
Short description: | p@chr10:86713933..86713937, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:86713933..86713937, - |
Coexpression cluster: | C984_chorionic_Preadipocyte_Fibroblast_mesenchymal_Lens_amniotic_Myoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 1.16e-20 | 6 |
sensory epithelial cell | 1.16e-20 | 6 |
olfactory epithelial cell | 1.16e-20 | 6 |
chorionic membrane mesenchymal stem cell | 1.14e-18 | 3 |
aortic smooth muscle cell | 9.27e-13 | 10 |
extraembryonic cell | 7.19e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.14e-18 | 3 |
blood vessel smooth muscle | 9.27e-13 | 10 |
arterial system smooth muscle | 9.27e-13 | 10 |
artery smooth muscle tissue | 9.27e-13 | 10 |
aorta smooth muscle tissue | 9.27e-13 | 10 |
right ovary | 1.67e-11 | 5 |
aorta | 1.87e-10 | 21 |
aortic system | 1.87e-10 | 21 |
extraembryonic membrane | 3.85e-09 | 14 |
membranous layer | 3.85e-09 | 14 |
smooth muscle tissue | 1.08e-08 | 15 |
chorion | 1.53e-08 | 7 |
systemic artery | 9.99e-07 | 33 |
systemic arterial system | 9.99e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.95e-09 | 14 |