FFCP PHASE1:Hg19::chr10:93373465..93373477,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:93373465..93373477,- | |||
|description=CAGE_peak_at_chr10:93373465..93373477,- | |description=CAGE_peak_at_chr10:93373465..93373477,- | ||
|id=chr10:93373465..93373477,- | |id=chr10:93373465..93373477,- | ||
|ontology_enrichment_celltype=CL:0000359!2.17e-19!32;CL:0000192!1.71e-16!42;CL:0000514!1.71e-16!42;CL:0000055!1.07e-15!180;CL:0000680!1.37e-14!57;CL:0000056!1.37e-14!57;CL:0000355!1.37e-14!57;CL:0000187!1.82e-11!54;CL:0000393!8.69e-11!60;CL:0000211!8.69e-11!60;CL:0000183!5.32e-10!59;CL:0002539!6.41e-10!10;CL:0002594!2.68e-09!4 | |ontology_enrichment_celltype=CL:0000359!2.17e-19!32;CL:0000192!1.71e-16!42;CL:0000514!1.71e-16!42;CL:0000055!1.07e-15!180;CL:0000680!1.37e-14!57;CL:0000056!1.37e-14!57;CL:0000355!1.37e-14!57;CL:0000187!1.82e-11!54;CL:0000393!8.69e-11!60;CL:0000211!8.69e-11!60;CL:0000183!5.32e-10!59;CL:0002539!6.41e-10!10;CL:0002594!2.68e-09!4 | ||
|ontology_enrichment_celltype_v019=CL:0002594;7.35e-31;4!CL:0000359;1.26e-30;32!CL:0002592;2.12e-18;3!CL:0000192;1.33e-17;43!CL:0002539;9.46e-13;10!CL:0000393;1.14e-08;61!CL:0000211;1.14e-08;61!CL:0000187;3.18e-08;55 | |ontology_enrichment_celltype_v019=CL:0002594;7.35e-31;4!CL:0000359;1.26e-30;32!CL:0002592;2.12e-18;3!CL:0000192;1.33e-17;43!CL:0002539;9.46e-13;10!CL:0000393;1.14e-08;61!CL:0000211;1.14e-08;61!CL:0000187;3.18e-08;55 | ||
|ontology_enrichment_celltype_v019_2=CL:0000359,8.04e-33,32;CL:0002594,6.32e-31,4;CL:0000192,3.22e-24,43;CL:0000514,3.22e-24,43;CL:0000680,5.60e-22,58;CL:0000056,5.60e-22,58;CL:0000355,5.60e-22,58;CL:0000187,9.57e-19,55;CL:0002592,1.48e-18,3;CL:0000393,8.19e-17,61;CL:0000211,8.19e-17,61;CL:0002539,1.00e-12,10;CL:0000222,5.94e-10,121 | |||
|ontology_enrichment_development_v019=CL:0000514;1.33e-17;43!CL:0000355;4.76e-11;58 | |ontology_enrichment_development_v019=CL:0000514;1.33e-17;43!CL:0000355;4.76e-11;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2513;1.97e-14;1!DOID:3451;7.27e-08;2!DOID:4159;7.27e-08;2!DOID:0060122;7.27e-08;2!DOID:1909;7.27e-08;2 | |ontology_enrichment_disease_v019=DOID:2513;1.97e-14;1!DOID:3451;7.27e-08;2!DOID:4159;7.27e-08;2!DOID:0060122;7.27e-08;2!DOID:1909;7.27e-08;2 | ||
|ontology_enrichment_disease_v019_2=DOID:2513,1.84e-14,1;DOID:3451,7.03e-08,2;DOID:4159,7.03e-08,2;DOID:0060122,7.03e-08,2;DOID:1909,8.04e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0001637!1.04e-13!42;UBERON:0003509!1.04e-13!42;UBERON:0004572!1.04e-13!42;UBERON:0000914!1.05e-13!83;UBERON:0002329!1.05e-13!83;UBERON:0003077!1.05e-13!83;UBERON:0003059!1.05e-13!83;UBERON:0007282!1.05e-13!83;UBERON:0009618!1.05e-13!83;UBERON:0007285!1.05e-13!83;UBERON:0001134!3.58e-13!61;UBERON:0002036!3.58e-13!61;UBERON:0003082!3.58e-13!61;UBERON:0002385!1.56e-12!63;UBERON:0001015!1.56e-12!63;UBERON:0000383!1.56e-12!63;UBERON:0004290!1.07e-11!70;UBERON:0004573!3.87e-11!33;UBERON:0004571!3.87e-11!33;UBERON:0004237!6.41e-10!10;UBERON:0004695!6.41e-10!10;UBERON:0002111!6.41e-10!10;UBERON:0004178!6.41e-10!10;UBERON:0000486!8.41e-10!82;UBERON:0001310!2.68e-09!4;UBERON:0001981!6.34e-09!60;UBERON:0007500!6.34e-09!60;UBERON:0004537!6.34e-09!60;UBERON:0006965!6.34e-09!60;UBERON:0005256!5.11e-08!143;UBERON:0001135!9.80e-08!15;UBERON:0000055!4.44e-07!69;UBERON:0002049!4.46e-07!79;UBERON:0007798!4.46e-07!79;UBERON:0004872!5.18e-07!84 | |ontology_enrichment_uberon=UBERON:0001637!1.04e-13!42;UBERON:0003509!1.04e-13!42;UBERON:0004572!1.04e-13!42;UBERON:0000914!1.05e-13!83;UBERON:0002329!1.05e-13!83;UBERON:0003077!1.05e-13!83;UBERON:0003059!1.05e-13!83;UBERON:0007282!1.05e-13!83;UBERON:0009618!1.05e-13!83;UBERON:0007285!1.05e-13!83;UBERON:0001134!3.58e-13!61;UBERON:0002036!3.58e-13!61;UBERON:0003082!3.58e-13!61;UBERON:0002385!1.56e-12!63;UBERON:0001015!1.56e-12!63;UBERON:0000383!1.56e-12!63;UBERON:0004290!1.07e-11!70;UBERON:0004573!3.87e-11!33;UBERON:0004571!3.87e-11!33;UBERON:0004237!6.41e-10!10;UBERON:0004695!6.41e-10!10;UBERON:0002111!6.41e-10!10;UBERON:0004178!6.41e-10!10;UBERON:0000486!8.41e-10!82;UBERON:0001310!2.68e-09!4;UBERON:0001981!6.34e-09!60;UBERON:0007500!6.34e-09!60;UBERON:0004537!6.34e-09!60;UBERON:0006965!6.34e-09!60;UBERON:0005256!5.11e-08!143;UBERON:0001135!9.80e-08!15;UBERON:0000055!4.44e-07!69;UBERON:0002049!4.46e-07!79;UBERON:0007798!4.46e-07!79;UBERON:0004872!5.18e-07!84 | ||
|ontology_enrichment_uberon_v019=UBERON:0001310;7.35e-31;4!UBERON:0001637;7.30e-21;42!UBERON:0003509;7.30e-21;42!UBERON:0004572;7.30e-21;42!UBERON:0003498;2.12e-18;3!UBERON:0005985;2.12e-18;3!UBERON:0001621;2.12e-18;3!UBERON:0004573;6.01e-15;33!UBERON:0004571;6.01e-15;33!UBERON:0005795;1.97e-14;1!UBERON:0010260;4.23e-14;9!UBERON:0007500;5.92e-13;56!UBERON:0001981;5.92e-13;56!UBERON:0004537;5.92e-13;56!UBERON:0004237;9.46e-13;10!UBERON:0004695;9.46e-13;10!UBERON:0002111;9.46e-13;10!UBERON:0004178;9.46e-13;10!UBERON:0000947;1.78e-10;21!UBERON:0010191;1.78e-10;21!UBERON:0002049;1.19e-09;75!UBERON:0007798;1.19e-09;75!UBERON:0000055;1.84e-09;65!UBERON:0001135;1.10e-08;15!UBERON:0002385;3.47e-07;31!UBERON:0001015;3.47e-07;31!UBERON:0000383;3.47e-07;31 | |ontology_enrichment_uberon_v019=UBERON:0001310;7.35e-31;4!UBERON:0001637;7.30e-21;42!UBERON:0003509;7.30e-21;42!UBERON:0004572;7.30e-21;42!UBERON:0003498;2.12e-18;3!UBERON:0005985;2.12e-18;3!UBERON:0001621;2.12e-18;3!UBERON:0004573;6.01e-15;33!UBERON:0004571;6.01e-15;33!UBERON:0005795;1.97e-14;1!UBERON:0010260;4.23e-14;9!UBERON:0007500;5.92e-13;56!UBERON:0001981;5.92e-13;56!UBERON:0004537;5.92e-13;56!UBERON:0004237;9.46e-13;10!UBERON:0004695;9.46e-13;10!UBERON:0002111;9.46e-13;10!UBERON:0004178;9.46e-13;10!UBERON:0000947;1.78e-10;21!UBERON:0010191;1.78e-10;21!UBERON:0002049;1.19e-09;75!UBERON:0007798;1.19e-09;75!UBERON:0000055;1.84e-09;65!UBERON:0001135;1.10e-08;15!UBERON:0002385;3.47e-07;31!UBERON:0001015;3.47e-07;31!UBERON:0000383;3.47e-07;31 | ||
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|short_description=p@chr10:93373465..93373477,- | |short_description=p@chr10:93373465..93373477,- | ||
}} | }} |
Latest revision as of 16:45, 23 July 2015
Short description: | p@chr10:93373465..93373477, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:93373465..93373477, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 8.04e-33 | 32 |
smooth muscle cell of the umbilical artery | 6.32e-31 | 4 |
smooth muscle cell | 3.22e-24 | 43 |
smooth muscle myoblast | 3.22e-24 | 43 |
muscle precursor cell | 5.60e-22 | 58 |
myoblast | 5.60e-22 | 58 |
multi-potent skeletal muscle stem cell | 5.60e-22 | 58 |
muscle cell | 9.57e-19 | 55 |
smooth muscle cell of the coronary artery | 1.48e-18 | 3 |
electrically responsive cell | 8.19e-17 | 61 |
electrically active cell | 8.19e-17 | 61 |
aortic smooth muscle cell | 1.00e-12 | 10 |
mesodermal cell | 5.94e-10 | 121 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 1.84e-14 | 1 |
skin carcinoma | 7.03e-08 | 2 |
skin cancer | 7.03e-08 | 2 |
integumentary system cancer | 7.03e-08 | 2 |
melanoma | 8.04e-08 | 2 |