FFCP PHASE1:Hg19::chr10:93373465..93373477,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:93373465..93373477,- | |||
|description=CAGE_peak_at_chr10:93373465..93373477,- | |||
|id=chr10:93373465..93373477,- | |||
|ontology_enrichment_celltype=CL:0000359!2.17e-19!32;CL:0000192!1.71e-16!42;CL:0000514!1.71e-16!42;CL:0000055!1.07e-15!180;CL:0000680!1.37e-14!57;CL:0000056!1.37e-14!57;CL:0000355!1.37e-14!57;CL:0000187!1.82e-11!54;CL:0000393!8.69e-11!60;CL:0000211!8.69e-11!60;CL:0000183!5.32e-10!59;CL:0002539!6.41e-10!10;CL:0002594!2.68e-09!4 | |||
|ontology_enrichment_celltype_v019=CL:0002594;7.35e-31;4!CL:0000359;1.26e-30;32!CL:0002592;2.12e-18;3!CL:0000192;1.33e-17;43!CL:0002539;9.46e-13;10!CL:0000393;1.14e-08;61!CL:0000211;1.14e-08;61!CL:0000187;3.18e-08;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,8.04e-33,32;CL:0002594,6.32e-31,4;CL:0000192,3.22e-24,43;CL:0000514,3.22e-24,43;CL:0000680,5.60e-22,58;CL:0000056,5.60e-22,58;CL:0000355,5.60e-22,58;CL:0000187,9.57e-19,55;CL:0002592,1.48e-18,3;CL:0000393,8.19e-17,61;CL:0000211,8.19e-17,61;CL:0002539,1.00e-12,10;CL:0000222,5.94e-10,121 | |||
|ontology_enrichment_development_v019=CL:0000514;1.33e-17;43!CL:0000355;4.76e-11;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;1.97e-14;1!DOID:3451;7.27e-08;2!DOID:4159;7.27e-08;2!DOID:0060122;7.27e-08;2!DOID:1909;7.27e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,1.84e-14,1;DOID:3451,7.03e-08,2;DOID:4159,7.03e-08,2;DOID:0060122,7.03e-08,2;DOID:1909,8.04e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0001637!1.04e-13!42;UBERON:0003509!1.04e-13!42;UBERON:0004572!1.04e-13!42;UBERON:0000914!1.05e-13!83;UBERON:0002329!1.05e-13!83;UBERON:0003077!1.05e-13!83;UBERON:0003059!1.05e-13!83;UBERON:0007282!1.05e-13!83;UBERON:0009618!1.05e-13!83;UBERON:0007285!1.05e-13!83;UBERON:0001134!3.58e-13!61;UBERON:0002036!3.58e-13!61;UBERON:0003082!3.58e-13!61;UBERON:0002385!1.56e-12!63;UBERON:0001015!1.56e-12!63;UBERON:0000383!1.56e-12!63;UBERON:0004290!1.07e-11!70;UBERON:0004573!3.87e-11!33;UBERON:0004571!3.87e-11!33;UBERON:0004237!6.41e-10!10;UBERON:0004695!6.41e-10!10;UBERON:0002111!6.41e-10!10;UBERON:0004178!6.41e-10!10;UBERON:0000486!8.41e-10!82;UBERON:0001310!2.68e-09!4;UBERON:0001981!6.34e-09!60;UBERON:0007500!6.34e-09!60;UBERON:0004537!6.34e-09!60;UBERON:0006965!6.34e-09!60;UBERON:0005256!5.11e-08!143;UBERON:0001135!9.80e-08!15;UBERON:0000055!4.44e-07!69;UBERON:0002049!4.46e-07!79;UBERON:0007798!4.46e-07!79;UBERON:0004872!5.18e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0001310;7.35e-31;4!UBERON:0001637;7.30e-21;42!UBERON:0003509;7.30e-21;42!UBERON:0004572;7.30e-21;42!UBERON:0003498;2.12e-18;3!UBERON:0005985;2.12e-18;3!UBERON:0001621;2.12e-18;3!UBERON:0004573;6.01e-15;33!UBERON:0004571;6.01e-15;33!UBERON:0005795;1.97e-14;1!UBERON:0010260;4.23e-14;9!UBERON:0007500;5.92e-13;56!UBERON:0001981;5.92e-13;56!UBERON:0004537;5.92e-13;56!UBERON:0004237;9.46e-13;10!UBERON:0004695;9.46e-13;10!UBERON:0002111;9.46e-13;10!UBERON:0004178;9.46e-13;10!UBERON:0000947;1.78e-10;21!UBERON:0010191;1.78e-10;21!UBERON:0002049;1.19e-09;75!UBERON:0007798;1.19e-09;75!UBERON:0000055;1.84e-09;65!UBERON:0001135;1.10e-08;15!UBERON:0002385;3.47e-07;31!UBERON:0001015;3.47e-07;31!UBERON:0000383;3.47e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001310,6.32e-31,4;UBERON:0001637,1.55e-30,42;UBERON:0003509,1.55e-30,42;UBERON:0004572,1.55e-30,42;UBERON:0007500,1.88e-21,59;UBERON:0001981,1.88e-21,59;UBERON:0004537,1.88e-21,59;UBERON:0006965,1.88e-21,59;UBERON:0001134,1.71e-20,62;UBERON:0002036,1.71e-20,62;UBERON:0003082,1.71e-20,62;UBERON:0002385,8.06e-20,64;UBERON:0001015,8.06e-20,64;UBERON:0000383,8.06e-20,64;UBERON:0004573,3.83e-19,33;UBERON:0004571,3.83e-19,33;UBERON:0001621,1.48e-18,3;UBERON:0000055,1.79e-18,68;UBERON:0002329,9.24e-18,71;UBERON:0003059,9.24e-18,71;UBERON:0007282,9.24e-18,71;UBERON:0004290,9.24e-18,71;UBERON:0009618,9.24e-18,71;UBERON:0003077,1.69e-17,72;UBERON:0007285,1.69e-17,72;UBERON:0007524,3.03e-17,73;UBERON:0007503,4.54e-16,78;UBERON:0002049,5.74e-16,78;UBERON:0007798,5.74e-16,78;UBERON:0000486,4.91e-15,83;UBERON:0004872,6.12e-15,83;UBERON:0010260,3.96e-14,9;UBERON:0004237,1.00e-12,10;UBERON:0004695,1.00e-12,10;UBERON:0002111,1.00e-12,10;UBERON:0004178,1.00e-12,10;UBERON:0003498,1.58e-11,5;UBERON:0005985,1.58e-11,5;UBERON:0004535,4.18e-11,109;UBERON:0001009,8.90e-11,112;UBERON:0000947,2.01e-10,21;UBERON:0010191,2.01e-10,21;UBERON:0003914,2.88e-10,117;UBERON:0005256,7.33e-10,122;UBERON:0001135,1.14e-08,15;UBERON:0000490,6.45e-08,148;UBERON:0003104,3.13e-07,160;UBERON:0009142,3.13e-07,160;UBERON:0002204,7.94e-07,167 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0,2.01697543935533,2.41077811209591,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.506522046658319,1.05927344650575,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0.408308342509787,0,0.309977343527296,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0.71181185733329,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0.503946384596579,0.141775097242386,0,0,0,0,0,0,0,0,0.126995788584338,0.763976851116555,0,0,0.102827492703324,0,0.285826432630578,0.112131084345361,0,0.07333828582095,0.387815147273333,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0.479249710983165,0,0,5.35690834670043,0.205476322550383,0.716243852959582,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744323423456331,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0.519254429183621,0,0,0,0.276242966807689,0.114814448164607,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0.6970372701606,0,3.19383618190213,0,0.9266210955196,0,0,0.316379424718726,0,0,0,0,0,0,0,0.117812402345686,1.61745985258653,1.58510321173008,0,0,0.487426979262569,0,0,0.282810863907425,0,0,0.66343897524122,1.75380354101505,0,0,2.63783490051515,2.16876448669825,0.281695602532241,0.143411352204052,0,3.21003946333125,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24415835064723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0.313932918407225,0,0,0,0,0,0,0,0.171986032471617,0.0967563312890851,0.146178634172371,0,0.0969890164884194,0,0,0.548167698587004,0,0,0,0,0,0,0,0,0,0.720273989940749,0,0,0,0.104602846312333,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0.979762080328227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21319294033318,0,0,0,0,0,0,0.554805861502613,0,0.251567901752575,0,0.457680136793847,0,0,0,0.159296767163702,0,0,0,0.53168342911599,0,0,0,0,0,0,0,0,1.20008329398946,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0.691259661814092,0,0.236664001461131,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0.0814032686109745,0,0,0,0,0,1.22068853494722,0,0,0 | |||
|short_description=p@chr10:93373465..93373477,- | |||
}} |
Latest revision as of 16:45, 23 July 2015
Short description: | p@chr10:93373465..93373477, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:93373465..93373477, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 8.04e-33 | 32 |
smooth muscle cell of the umbilical artery | 6.32e-31 | 4 |
smooth muscle cell | 3.22e-24 | 43 |
smooth muscle myoblast | 3.22e-24 | 43 |
muscle precursor cell | 5.60e-22 | 58 |
myoblast | 5.60e-22 | 58 |
multi-potent skeletal muscle stem cell | 5.60e-22 | 58 |
muscle cell | 9.57e-19 | 55 |
smooth muscle cell of the coronary artery | 1.48e-18 | 3 |
electrically responsive cell | 8.19e-17 | 61 |
electrically active cell | 8.19e-17 | 61 |
aortic smooth muscle cell | 1.00e-12 | 10 |
mesodermal cell | 5.94e-10 | 121 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 1.84e-14 | 1 |
skin carcinoma | 7.03e-08 | 2 |
skin cancer | 7.03e-08 | 2 |
integumentary system cancer | 7.03e-08 | 2 |
melanoma | 8.04e-08 | 2 |